Detecting, classifying, and counting blue whale calls with Siamese neural networks

International audience The goal of this project is to use acoustic signatures to detect, classify, and count the calls of four acoustic populations of blue whales so that, ultimately, the conservation status of each population can be better assessed. We used manual annotations from 350 h of audio re...

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Published in:The Journal of the Acoustical Society of America
Main Authors: Zhong, Ming, Torterotot, Maëlle, Branch, Trevor, Stafford, Kathleen, Royer, Jean-Yves, Dodhia, Rahul, Lavista Ferres, Juan
Other Authors: Laboratoire Géosciences Océan (LGO), Université de Bretagne Sud (UBS)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Université de Brest (UBO)-Centre National de la Recherche Scientifique (CNRS), Interdisciplinary Graduate School for the Blue plane, ANR-17-EURE-0015,ISBlue,Interdisciplinary Graduate School for the Blue planet(2017)
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2021
Subjects:
Online Access:https://hal.univ-brest.fr/hal-03263839
https://doi.org/10.1121/10.0004828
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spelling ftunivbrest:oai:HAL:hal-03263839v1 2023-05-15T15:45:07+02:00 Detecting, classifying, and counting blue whale calls with Siamese neural networks Zhong, Ming Torterotot, Maëlle Branch, Trevor Stafford, Kathleen Royer, Jean-Yves Dodhia, Rahul Lavista Ferres, Juan Laboratoire Géosciences Océan (LGO) Université de Bretagne Sud (UBS)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Université de Brest (UBO)-Centre National de la Recherche Scientifique (CNRS) Interdisciplinary Graduate School for the Blue plane ANR-17-EURE-0015,ISBlue,Interdisciplinary Graduate School for the Blue planet(2017) 2021-05 https://hal.univ-brest.fr/hal-03263839 https://doi.org/10.1121/10.0004828 en eng HAL CCSD Acoustical Society of America info:eu-repo/semantics/altIdentifier/doi/10.1121/10.0004828 hal-03263839 https://hal.univ-brest.fr/hal-03263839 doi:10.1121/10.0004828 ISSN: 0001-4966 EISSN: 1520-8524 Journal of the Acoustical Society of America https://hal.univ-brest.fr/hal-03263839 Journal of the Acoustical Society of America, 2021, 149 (5), pp.3086-3094. ⟨10.1121/10.0004828⟩ [SDE]Environmental Sciences info:eu-repo/semantics/article Journal articles 2021 ftunivbrest https://doi.org/10.1121/10.0004828 2023-02-14T23:44:42Z International audience The goal of this project is to use acoustic signatures to detect, classify, and count the calls of four acoustic populations of blue whales so that, ultimately, the conservation status of each population can be better assessed. We used manual annotations from 350 h of audio recordings from the underwater hydrophones in the Indian Ocean to build a deep learning model to detect, classify, and count the calls from four acoustic song types. The method we used was Siamese neural networks (SNN), a class of neural network architectures that are used to find the similarity of the inputs by comparing their feature vectors, finding that they outperformed the more widely used convolutional neural networks (CNN). Specifically, the SNN outperform a CNN with 2% accuracy improvement in population classification and 1.7%-6.4% accuracy improvement in call count estimation for each blue whale population. In addition, even though we treat the call count estimation problem as a classification task and encode the number of calls in each spectrogram as a categorical variable, SNN surprisingly learned the ordinal relationship among them. SNN are robust and are shown here to be an effective way to automatically mine large acoustic datasets for blue whale calls. Article in Journal/Newspaper Blue whale Université de Bretagne Occidentale: HAL Indian The Journal of the Acoustical Society of America 149 5 3086 3094
institution Open Polar
collection Université de Bretagne Occidentale: HAL
op_collection_id ftunivbrest
language English
topic [SDE]Environmental Sciences
spellingShingle [SDE]Environmental Sciences
Zhong, Ming
Torterotot, Maëlle
Branch, Trevor
Stafford, Kathleen
Royer, Jean-Yves
Dodhia, Rahul
Lavista Ferres, Juan
Detecting, classifying, and counting blue whale calls with Siamese neural networks
topic_facet [SDE]Environmental Sciences
description International audience The goal of this project is to use acoustic signatures to detect, classify, and count the calls of four acoustic populations of blue whales so that, ultimately, the conservation status of each population can be better assessed. We used manual annotations from 350 h of audio recordings from the underwater hydrophones in the Indian Ocean to build a deep learning model to detect, classify, and count the calls from four acoustic song types. The method we used was Siamese neural networks (SNN), a class of neural network architectures that are used to find the similarity of the inputs by comparing their feature vectors, finding that they outperformed the more widely used convolutional neural networks (CNN). Specifically, the SNN outperform a CNN with 2% accuracy improvement in population classification and 1.7%-6.4% accuracy improvement in call count estimation for each blue whale population. In addition, even though we treat the call count estimation problem as a classification task and encode the number of calls in each spectrogram as a categorical variable, SNN surprisingly learned the ordinal relationship among them. SNN are robust and are shown here to be an effective way to automatically mine large acoustic datasets for blue whale calls.
author2 Laboratoire Géosciences Océan (LGO)
Université de Bretagne Sud (UBS)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Université de Brest (UBO)-Centre National de la Recherche Scientifique (CNRS)
Interdisciplinary Graduate School for the Blue plane
ANR-17-EURE-0015,ISBlue,Interdisciplinary Graduate School for the Blue planet(2017)
format Article in Journal/Newspaper
author Zhong, Ming
Torterotot, Maëlle
Branch, Trevor
Stafford, Kathleen
Royer, Jean-Yves
Dodhia, Rahul
Lavista Ferres, Juan
author_facet Zhong, Ming
Torterotot, Maëlle
Branch, Trevor
Stafford, Kathleen
Royer, Jean-Yves
Dodhia, Rahul
Lavista Ferres, Juan
author_sort Zhong, Ming
title Detecting, classifying, and counting blue whale calls with Siamese neural networks
title_short Detecting, classifying, and counting blue whale calls with Siamese neural networks
title_full Detecting, classifying, and counting blue whale calls with Siamese neural networks
title_fullStr Detecting, classifying, and counting blue whale calls with Siamese neural networks
title_full_unstemmed Detecting, classifying, and counting blue whale calls with Siamese neural networks
title_sort detecting, classifying, and counting blue whale calls with siamese neural networks
publisher HAL CCSD
publishDate 2021
url https://hal.univ-brest.fr/hal-03263839
https://doi.org/10.1121/10.0004828
geographic Indian
geographic_facet Indian
genre Blue whale
genre_facet Blue whale
op_source ISSN: 0001-4966
EISSN: 1520-8524
Journal of the Acoustical Society of America
https://hal.univ-brest.fr/hal-03263839
Journal of the Acoustical Society of America, 2021, 149 (5), pp.3086-3094. ⟨10.1121/10.0004828⟩
op_relation info:eu-repo/semantics/altIdentifier/doi/10.1121/10.0004828
hal-03263839
https://hal.univ-brest.fr/hal-03263839
doi:10.1121/10.0004828
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container_title The Journal of the Acoustical Society of America
container_volume 149
container_issue 5
container_start_page 3086
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