Periphyton diversity in two different Antarctic lakes assessed using metabarcoding
Antarctic lakes have generally simple periphyton communities when compared with those of lower latitudes. To date, assessment of microbial diversity in Antarctica has relied heavily on traditional direct observation and cultivation methods. In this study, sterilized cotton baits were left submerged...
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ftunivbrasilia:oai:repositorio.unb.br:10482/43590 2023-07-30T03:58:31+02:00 Periphyton diversity in two different Antarctic lakes assessed using metabarcoding Câmara, Paulo Eduardo Aguiar Saraiva Souza, Láuren M. D. de Pinto, Otávio Henrique Bezerra Convey, Peter Amorim, Eduardo T. Silva, Micheline Carvalho Rosa, Luiz Henrique 2021 https://repositorio.unb.br/handle/10482/43590 https://doi.org/10.1017/S0954102021000316 Inglês eng Springer https://www.cambridge.org/core/journals/antarctic-science/article/periphyton-diversity-in-two-different-antarctic-lakes-assessed-using-metabarcoding/969D76E3970A1DAD4E54097F9165DA0E CÂMARA, Paulo E. A. S. et al. Periphyton diversity in two different Antarctic lakes assessed using metabarcoding. Antarctic Science, v. 33, n. 6, p. 596-604, 2021. DOI: https://doi.org/10.1017/S0954102021000316. Disponível em: https://www.cambridge.org/core/journals/antarctic-science/article/periphyton-diversity-in-two-different-antarctic-lakes-assessed-using-metabarcoding/969D76E3970A1DAD4E54097F9165DA0E. Acesso em: 26 abr. 2022. https://repositorio.unb.br/handle/10482/43590 https://doi.org/10.1017/S0954102021000316 orcid:0000-0002-3944-996X orcid:0000-0001-6007-3840 orcid:0000-0002-8382-2987 orcid:0000-0001-8497-9903 orcid:0000-0003-4253-1339 orcid:0000-0002-2389-3804 orcid:0000-0001-9749-5182 Acesso Restrito Copyright © Antarctic Science Ltd 2021 Antártica Sequenciamento de alto rendimento Espaçador ITS Artigo 2021 ftunivbrasilia https://doi.org/10.1017/S0954102021000316 2023-07-16T20:15:11Z Antarctic lakes have generally simple periphyton communities when compared with those of lower latitudes. To date, assessment of microbial diversity in Antarctica has relied heavily on traditional direct observation and cultivation methods. In this study, sterilized cotton baits were left submerged for two years in two lakes on King George Island and Deception Island, South Shetland Islands (Maritime Antarctic), followed by assessment of diversity by metabarcoding using high-throughput sequencing. DNA sequences of 44 taxa belonging to four kingdoms and seven phyla were found. Thirty-six taxa were detected in Hennequin Lake on King George Island and 20 taxa were detected in Soto Lake on Deception Island. However, no significant difference in species composition was detected between the two assemblages (Shannon index). Our data suggest that metabarcoding provides a suitable method for the assessment of periphyton biodiversity in oligotrophic Antarctic lakes. Article in Journal/Newspaper Antarc* Antarctic Antarctic Science Antarctica Antártica Deception Island King George Island South Shetland Islands Universidade de Brasília: Repositório Institucional da UnB Antarctic King George Island South Shetland Islands Deception Island ENVELOPE(-60.633,-60.633,-62.950,-62.950) Hennequin ENVELOPE(-58.350,-58.350,-62.117,-62.117) Antarctic Science 33 6 596 604 |
institution |
Open Polar |
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Universidade de Brasília: Repositório Institucional da UnB |
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ftunivbrasilia |
language |
English |
topic |
Antártica Sequenciamento de alto rendimento Espaçador ITS |
spellingShingle |
Antártica Sequenciamento de alto rendimento Espaçador ITS Câmara, Paulo Eduardo Aguiar Saraiva Souza, Láuren M. D. de Pinto, Otávio Henrique Bezerra Convey, Peter Amorim, Eduardo T. Silva, Micheline Carvalho Rosa, Luiz Henrique Periphyton diversity in two different Antarctic lakes assessed using metabarcoding |
topic_facet |
Antártica Sequenciamento de alto rendimento Espaçador ITS |
description |
Antarctic lakes have generally simple periphyton communities when compared with those of lower latitudes. To date, assessment of microbial diversity in Antarctica has relied heavily on traditional direct observation and cultivation methods. In this study, sterilized cotton baits were left submerged for two years in two lakes on King George Island and Deception Island, South Shetland Islands (Maritime Antarctic), followed by assessment of diversity by metabarcoding using high-throughput sequencing. DNA sequences of 44 taxa belonging to four kingdoms and seven phyla were found. Thirty-six taxa were detected in Hennequin Lake on King George Island and 20 taxa were detected in Soto Lake on Deception Island. However, no significant difference in species composition was detected between the two assemblages (Shannon index). Our data suggest that metabarcoding provides a suitable method for the assessment of periphyton biodiversity in oligotrophic Antarctic lakes. |
format |
Article in Journal/Newspaper |
author |
Câmara, Paulo Eduardo Aguiar Saraiva Souza, Láuren M. D. de Pinto, Otávio Henrique Bezerra Convey, Peter Amorim, Eduardo T. Silva, Micheline Carvalho Rosa, Luiz Henrique |
author_facet |
Câmara, Paulo Eduardo Aguiar Saraiva Souza, Láuren M. D. de Pinto, Otávio Henrique Bezerra Convey, Peter Amorim, Eduardo T. Silva, Micheline Carvalho Rosa, Luiz Henrique |
author_sort |
Câmara, Paulo Eduardo Aguiar Saraiva |
title |
Periphyton diversity in two different Antarctic lakes assessed using metabarcoding |
title_short |
Periphyton diversity in two different Antarctic lakes assessed using metabarcoding |
title_full |
Periphyton diversity in two different Antarctic lakes assessed using metabarcoding |
title_fullStr |
Periphyton diversity in two different Antarctic lakes assessed using metabarcoding |
title_full_unstemmed |
Periphyton diversity in two different Antarctic lakes assessed using metabarcoding |
title_sort |
periphyton diversity in two different antarctic lakes assessed using metabarcoding |
publisher |
Springer |
publishDate |
2021 |
url |
https://repositorio.unb.br/handle/10482/43590 https://doi.org/10.1017/S0954102021000316 |
long_lat |
ENVELOPE(-60.633,-60.633,-62.950,-62.950) ENVELOPE(-58.350,-58.350,-62.117,-62.117) |
geographic |
Antarctic King George Island South Shetland Islands Deception Island Hennequin |
geographic_facet |
Antarctic King George Island South Shetland Islands Deception Island Hennequin |
genre |
Antarc* Antarctic Antarctic Science Antarctica Antártica Deception Island King George Island South Shetland Islands |
genre_facet |
Antarc* Antarctic Antarctic Science Antarctica Antártica Deception Island King George Island South Shetland Islands |
op_relation |
https://www.cambridge.org/core/journals/antarctic-science/article/periphyton-diversity-in-two-different-antarctic-lakes-assessed-using-metabarcoding/969D76E3970A1DAD4E54097F9165DA0E CÂMARA, Paulo E. A. S. et al. Periphyton diversity in two different Antarctic lakes assessed using metabarcoding. Antarctic Science, v. 33, n. 6, p. 596-604, 2021. DOI: https://doi.org/10.1017/S0954102021000316. Disponível em: https://www.cambridge.org/core/journals/antarctic-science/article/periphyton-diversity-in-two-different-antarctic-lakes-assessed-using-metabarcoding/969D76E3970A1DAD4E54097F9165DA0E. Acesso em: 26 abr. 2022. https://repositorio.unb.br/handle/10482/43590 https://doi.org/10.1017/S0954102021000316 orcid:0000-0002-3944-996X orcid:0000-0001-6007-3840 orcid:0000-0002-8382-2987 orcid:0000-0001-8497-9903 orcid:0000-0003-4253-1339 orcid:0000-0002-2389-3804 orcid:0000-0001-9749-5182 |
op_rights |
Acesso Restrito Copyright © Antarctic Science Ltd 2021 |
op_doi |
https://doi.org/10.1017/S0954102021000316 |
container_title |
Antarctic Science |
container_volume |
33 |
container_issue |
6 |
container_start_page |
596 |
op_container_end_page |
604 |
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1772821298963021824 |