Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles.

Island populations often experience different ecological and demographic conditions than their counterparts on the continent, resulting in divergent evolutionary forces affecting their genomes. Random genetic drift and selection both may leave their imprints on island populations, although the relat...

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Published in:Genome Research
Main Authors: Wang, Xuejing, Heckel, Gerald
Format: Article in Journal/Newspaper
Language:English
Published: Cold Spring Harbor, N.Y 2024
Subjects:
Online Access:https://boris.unibe.ch/198402/1/Genome_Res.-2024-Wang-gr.278487.123.pdf
https://boris.unibe.ch/198402/
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spelling ftunivbern:oai:boris.unibe.ch:198402 2024-09-15T18:18:47+00:00 Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles. Wang, Xuejing Heckel, Gerald 2024-07-23 application/pdf https://boris.unibe.ch/198402/1/Genome_Res.-2024-Wang-gr.278487.123.pdf https://boris.unibe.ch/198402/ eng eng Cold Spring Harbor, N.Y https://boris.unibe.ch/198402/ info:eu-repo/semantics/openAccess Wang, Xuejing; Heckel, Gerald (2024). Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles. Genome research, 34(6), pp. 851-862. Cold Spring Harbor, N.Y 10.1101/gr.278487.123 <http://dx.doi.org/10.1101/gr.278487.123> 570 Life sciences biology info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion PeerReviewed 2024 ftunivbern https://doi.org/10.1101/gr.278487.123 2024-07-29T14:05:54Z Island populations often experience different ecological and demographic conditions than their counterparts on the continent, resulting in divergent evolutionary forces affecting their genomes. Random genetic drift and selection both may leave their imprints on island populations, although the relative impact depends strongly on the specific conditions. Here we address their contributions to the island syndrome in a rodent with an unusually clear history of isolation. Common voles (Microtus arvalis) were introduced by humans on the Orkney archipelago north of Scotland >5000 years ago and rapidly evolved to exceptionally large size. Our analyses show that the genomes of Orkney voles were dominated by genetic drift, with extremely low diversity, variable Tajima's D, and very high divergence from continental conspecifics. Increased d N/d S ratios over a wide range of genes in Orkney voles indicated genome-wide relaxation of purifying selection. We found evidence of hard sweeps on key genes of the lipid metabolism pathway only in continental voles. The marked increase of body size in Orkney-a typical phenomenon of the island syndrome-may thus be associated to the relaxation of positive selection on genes related to this pathway. On the other hand, a hard sweep on immune genes of Orkney voles likely reflects the divergent ecological conditions and possibly the history of human introduction. The long-term isolated Orkney voles show that adaptive changes may still impact the evolutionary trajectories of such populations despite the pervasive consequences of genetic drift at the genome level. Article in Journal/Newspaper Microtus arvalis BORIS (Bern Open Repository and Information System, University of Bern) Genome Research 34 6 851 862
institution Open Polar
collection BORIS (Bern Open Repository and Information System, University of Bern)
op_collection_id ftunivbern
language English
topic 570 Life sciences
biology
spellingShingle 570 Life sciences
biology
Wang, Xuejing
Heckel, Gerald
Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles.
topic_facet 570 Life sciences
biology
description Island populations often experience different ecological and demographic conditions than their counterparts on the continent, resulting in divergent evolutionary forces affecting their genomes. Random genetic drift and selection both may leave their imprints on island populations, although the relative impact depends strongly on the specific conditions. Here we address their contributions to the island syndrome in a rodent with an unusually clear history of isolation. Common voles (Microtus arvalis) were introduced by humans on the Orkney archipelago north of Scotland >5000 years ago and rapidly evolved to exceptionally large size. Our analyses show that the genomes of Orkney voles were dominated by genetic drift, with extremely low diversity, variable Tajima's D, and very high divergence from continental conspecifics. Increased d N/d S ratios over a wide range of genes in Orkney voles indicated genome-wide relaxation of purifying selection. We found evidence of hard sweeps on key genes of the lipid metabolism pathway only in continental voles. The marked increase of body size in Orkney-a typical phenomenon of the island syndrome-may thus be associated to the relaxation of positive selection on genes related to this pathway. On the other hand, a hard sweep on immune genes of Orkney voles likely reflects the divergent ecological conditions and possibly the history of human introduction. The long-term isolated Orkney voles show that adaptive changes may still impact the evolutionary trajectories of such populations despite the pervasive consequences of genetic drift at the genome level.
format Article in Journal/Newspaper
author Wang, Xuejing
Heckel, Gerald
author_facet Wang, Xuejing
Heckel, Gerald
author_sort Wang, Xuejing
title Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles.
title_short Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles.
title_full Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles.
title_fullStr Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles.
title_full_unstemmed Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles.
title_sort genome-wide relaxation of selection and the evolution of the island syndrome in orkney voles.
publisher Cold Spring Harbor, N.Y
publishDate 2024
url https://boris.unibe.ch/198402/1/Genome_Res.-2024-Wang-gr.278487.123.pdf
https://boris.unibe.ch/198402/
genre Microtus arvalis
genre_facet Microtus arvalis
op_source Wang, Xuejing; Heckel, Gerald (2024). Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles. Genome research, 34(6), pp. 851-862. Cold Spring Harbor, N.Y 10.1101/gr.278487.123 <http://dx.doi.org/10.1101/gr.278487.123>
op_relation https://boris.unibe.ch/198402/
op_rights info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1101/gr.278487.123
container_title Genome Research
container_volume 34
container_issue 6
container_start_page 851
op_container_end_page 862
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