Investigating population genetic structure in a highly mobile marine organism: The minke whale Balaenoptera acutorostrata acutorostrata in the North East Atlantic

Inferring the number of genetically distinct populations and their levels of connectivity is of key importance for the sustainable management and conservation of wildlife. This represents an extra challenge in the marine environment where there are few physical barriers to gene-flow, and populations...

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Published in:PLoS ONE
Main Authors: Sanchez, Maria Quintela, Skaug, Hans J., Øien, Nils Inge, Haug, Tore, Seliussen, Bjørghild Breistein, Solvang, Hiroko Kato, Pampoulie, Christophe, Kanda, Naohisa, Pastene, Luis A., Glover, Kevin
Format: Article in Journal/Newspaper
Language:English
Published: PLoS 2015
Subjects:
Online Access:https://hdl.handle.net/1956/9675
https://doi.org/10.1371/journal.pone.0108640
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spelling ftunivbergen:oai:bora.uib.no:1956/9675 2023-05-15T15:36:11+02:00 Investigating population genetic structure in a highly mobile marine organism: The minke whale Balaenoptera acutorostrata acutorostrata in the North East Atlantic Sanchez, Maria Quintela Skaug, Hans J. Øien, Nils Inge Haug, Tore Seliussen, Bjørghild Breistein Solvang, Hiroko Kato Pampoulie, Christophe Kanda, Naohisa Pastene, Luis A. Glover, Kevin 2015-03-03T15:25:06Z application/pdf https://hdl.handle.net/1956/9675 https://doi.org/10.1371/journal.pone.0108640 eng eng PLoS urn:issn:1932-6203 https://hdl.handle.net/1956/9675 https://doi.org/10.1371/journal.pone.0108640 cristin:1207894 Attribution CC BY http://creativecommons.org/licenses/by/3.0/ Copyright 2014 Quintela et al. e108640 PLoS ONE 9 VDP::Mathematics and natural scienses: 400::Basic biosciences: 470::Bioinformatics: 475 VDP::Mathematics and natural scienses: 400::Basic biosciences: 470::Genetics and genomics: 474 VDP::Matematikk og naturvitenskap: 400::Basale biofag: 470::Bioinformatikk: 475 VDP::Matematikk og naturvitenskap: 400::Basale biofag: 470::Genetikk og genomikk: 474 Peer reviewed Journal article 2015 ftunivbergen https://doi.org/10.1371/journal.pone.0108640 2023-03-14T17:39:11Z Inferring the number of genetically distinct populations and their levels of connectivity is of key importance for the sustainable management and conservation of wildlife. This represents an extra challenge in the marine environment where there are few physical barriers to gene-flow, and populations may overlap in time and space. Several studies have investigated the population genetic structure within the North Atlantic minke whale with contrasting results. In order to address this issue, we analyzed ten microsatellite loci and 331 bp of the mitochondrial D-loop on 2990 whales sampled in the North East Atlantic in the period 2004 and 2007–2011. The primary findings were: (1) No spatial or temporal genetic differentiations were observed for either class of genetic marker. (2) mtDNA identified three distinct mitochondrial lineages without any underlying geographical pattern. (3) Nuclear markers showed evidence of a single panmictic population in the NE Atlantic according STRUCTURE’s highest average likelihood found at K = 1. (4) When K = 2 was accepted, based on the Evanno’s test, whales were divided into two more or less equally sized groups that showed significant genetic differentiation between them but without any sign of underlying geographic pattern. However, mtDNA for these individuals did not corroborate the differentiation. (5) In order to further evaluate the potential for cryptic structuring, a set of 100 in silico generated panmictic populations was examined using the same procedures as above showing genetic differentiation between two artificially divided groups, similar to the aforementioned observations. This demonstrates that clustering methods may spuriously reveal cryptic genetic structure. Based upon these data, we find no evidence to support the existence of spatial or cryptic population genetic structure of minke whales within the NE Atlantic. However, in order to conclusively evaluate population structure within this highly mobile species, more markers will be required. publishedVersion Article in Journal/Newspaper Balaenoptera acutorostrata minke whale North Atlantic North East Atlantic University of Bergen: Bergen Open Research Archive (BORA-UiB) PLoS ONE 9 9 e108640
institution Open Polar
collection University of Bergen: Bergen Open Research Archive (BORA-UiB)
op_collection_id ftunivbergen
language English
topic VDP::Mathematics and natural scienses: 400::Basic biosciences: 470::Bioinformatics: 475
VDP::Mathematics and natural scienses: 400::Basic biosciences: 470::Genetics and genomics: 474
VDP::Matematikk og naturvitenskap: 400::Basale biofag: 470::Bioinformatikk: 475
VDP::Matematikk og naturvitenskap: 400::Basale biofag: 470::Genetikk og genomikk: 474
spellingShingle VDP::Mathematics and natural scienses: 400::Basic biosciences: 470::Bioinformatics: 475
VDP::Mathematics and natural scienses: 400::Basic biosciences: 470::Genetics and genomics: 474
VDP::Matematikk og naturvitenskap: 400::Basale biofag: 470::Bioinformatikk: 475
VDP::Matematikk og naturvitenskap: 400::Basale biofag: 470::Genetikk og genomikk: 474
Sanchez, Maria Quintela
Skaug, Hans J.
Øien, Nils Inge
Haug, Tore
Seliussen, Bjørghild Breistein
Solvang, Hiroko Kato
Pampoulie, Christophe
Kanda, Naohisa
Pastene, Luis A.
Glover, Kevin
Investigating population genetic structure in a highly mobile marine organism: The minke whale Balaenoptera acutorostrata acutorostrata in the North East Atlantic
topic_facet VDP::Mathematics and natural scienses: 400::Basic biosciences: 470::Bioinformatics: 475
VDP::Mathematics and natural scienses: 400::Basic biosciences: 470::Genetics and genomics: 474
VDP::Matematikk og naturvitenskap: 400::Basale biofag: 470::Bioinformatikk: 475
VDP::Matematikk og naturvitenskap: 400::Basale biofag: 470::Genetikk og genomikk: 474
description Inferring the number of genetically distinct populations and their levels of connectivity is of key importance for the sustainable management and conservation of wildlife. This represents an extra challenge in the marine environment where there are few physical barriers to gene-flow, and populations may overlap in time and space. Several studies have investigated the population genetic structure within the North Atlantic minke whale with contrasting results. In order to address this issue, we analyzed ten microsatellite loci and 331 bp of the mitochondrial D-loop on 2990 whales sampled in the North East Atlantic in the period 2004 and 2007–2011. The primary findings were: (1) No spatial or temporal genetic differentiations were observed for either class of genetic marker. (2) mtDNA identified three distinct mitochondrial lineages without any underlying geographical pattern. (3) Nuclear markers showed evidence of a single panmictic population in the NE Atlantic according STRUCTURE’s highest average likelihood found at K = 1. (4) When K = 2 was accepted, based on the Evanno’s test, whales were divided into two more or less equally sized groups that showed significant genetic differentiation between them but without any sign of underlying geographic pattern. However, mtDNA for these individuals did not corroborate the differentiation. (5) In order to further evaluate the potential for cryptic structuring, a set of 100 in silico generated panmictic populations was examined using the same procedures as above showing genetic differentiation between two artificially divided groups, similar to the aforementioned observations. This demonstrates that clustering methods may spuriously reveal cryptic genetic structure. Based upon these data, we find no evidence to support the existence of spatial or cryptic population genetic structure of minke whales within the NE Atlantic. However, in order to conclusively evaluate population structure within this highly mobile species, more markers will be required. publishedVersion
format Article in Journal/Newspaper
author Sanchez, Maria Quintela
Skaug, Hans J.
Øien, Nils Inge
Haug, Tore
Seliussen, Bjørghild Breistein
Solvang, Hiroko Kato
Pampoulie, Christophe
Kanda, Naohisa
Pastene, Luis A.
Glover, Kevin
author_facet Sanchez, Maria Quintela
Skaug, Hans J.
Øien, Nils Inge
Haug, Tore
Seliussen, Bjørghild Breistein
Solvang, Hiroko Kato
Pampoulie, Christophe
Kanda, Naohisa
Pastene, Luis A.
Glover, Kevin
author_sort Sanchez, Maria Quintela
title Investigating population genetic structure in a highly mobile marine organism: The minke whale Balaenoptera acutorostrata acutorostrata in the North East Atlantic
title_short Investigating population genetic structure in a highly mobile marine organism: The minke whale Balaenoptera acutorostrata acutorostrata in the North East Atlantic
title_full Investigating population genetic structure in a highly mobile marine organism: The minke whale Balaenoptera acutorostrata acutorostrata in the North East Atlantic
title_fullStr Investigating population genetic structure in a highly mobile marine organism: The minke whale Balaenoptera acutorostrata acutorostrata in the North East Atlantic
title_full_unstemmed Investigating population genetic structure in a highly mobile marine organism: The minke whale Balaenoptera acutorostrata acutorostrata in the North East Atlantic
title_sort investigating population genetic structure in a highly mobile marine organism: the minke whale balaenoptera acutorostrata acutorostrata in the north east atlantic
publisher PLoS
publishDate 2015
url https://hdl.handle.net/1956/9675
https://doi.org/10.1371/journal.pone.0108640
genre Balaenoptera acutorostrata
minke whale
North Atlantic
North East Atlantic
genre_facet Balaenoptera acutorostrata
minke whale
North Atlantic
North East Atlantic
op_source e108640
PLoS ONE
9
op_relation urn:issn:1932-6203
https://hdl.handle.net/1956/9675
https://doi.org/10.1371/journal.pone.0108640
cristin:1207894
op_rights Attribution CC BY
http://creativecommons.org/licenses/by/3.0/
Copyright 2014 Quintela et al.
op_doi https://doi.org/10.1371/journal.pone.0108640
container_title PLoS ONE
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