Profundibacter amoris gen. nov., sp. nov., a new member of the Roseobacter clade isolated from Loki's Castle Vent Field on the Arctic Mid-Ocean Ridge

A bacterial strain, designated BAR1T, was isolated from a microbial mat growing on the surface of a barite chimney at the Loki’s Castle Vent Field, at a depth of 2216 m. Cells of strain BAR1T were rod-shaped, Gram-reaction-negative and grew on marine broth 2216 at 10–37 °C (optimum 27–35 °C), pH 5.5...

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Published in:International Journal of Systematic and Evolutionary Microbiology
Main Authors: Le Moine Bauer, Sven, Sjøberg, Andreas Gilje, L´Haridon, Stephane, Stokke, Runar, Roalkvam, Irene, Steen, Ida Helene, Dahle, Håkon
Format: Article in Journal/Newspaper
Language:English
Published: Microbiology Society 2020
Subjects:
Online Access:https://hdl.handle.net/1956/23504
https://doi.org/10.1099/ijsem.0.003234
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spelling ftunivbergen:oai:bora.uib.no:1956/23504 2023-05-15T15:08:33+02:00 Profundibacter amoris gen. nov., sp. nov., a new member of the Roseobacter clade isolated from Loki's Castle Vent Field on the Arctic Mid-Ocean Ridge Le Moine Bauer, Sven Sjøberg, Andreas Gilje L´Haridon, Stephane Stokke, Runar Roalkvam, Irene Steen, Ida Helene Dahle, Håkon 2020-01-02T12:29:49Z application/pdf https://hdl.handle.net/1956/23504 https://doi.org/10.1099/ijsem.0.003234 eng eng Microbiology Society urn:issn:1466-5034 urn:issn:1466-5026 https://hdl.handle.net/1956/23504 https://doi.org/10.1099/ijsem.0.003234 cristin:1677450 Attribution CC BY http://creativecommons.org/licenses/by/4.0 Copyright 2019 IUMS International Journal of Systematic and Evolutionary Microbiology Peer reviewed Journal article 2020 ftunivbergen https://doi.org/10.1099/ijsem.0.003234 2023-03-14T17:41:20Z A bacterial strain, designated BAR1T, was isolated from a microbial mat growing on the surface of a barite chimney at the Loki’s Castle Vent Field, at a depth of 2216 m. Cells of strain BAR1T were rod-shaped, Gram-reaction-negative and grew on marine broth 2216 at 10–37 °C (optimum 27–35 °C), pH 5.5–8.0 (optimum pH 6.5–7.5) and 0.5–5.0 % NaCl (optimum 2 %). The DNA G+C content was 57.38 mol%. The membrane-associated major ubiquinone was Q-10, the fatty acid profile was dominated by C18 : 1ω7c (91 %), and the polar lipids detected were phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine, one unidentified aminolipid, one unidentified lipid and one unidentified phospholipid. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain BAR1T clustered together with Rhodobacterales bacterium PRT1, as well as the genera Halocynthiibacter and Pseudohalocynthiibacter in a polyphyletic clade within the Roseobacter clade. Several characteristics differentiate strain BAR1T from the aforementioned genera, including its motility, its piezophilic behaviour and its ability to grow at 35 °C and under anaerobic conditions. Accordingly, strain BAR1T is considered to represent a novel genus and species within the Roseobacter clade, for which the name Profundibacter amoris gen. nov., sp. nov. is proposed. The type strain is Profundibacter amoris BAR1T (=JCM 31874T=DSM 104147T). acceptedVersion Article in Journal/Newspaper Arctic University of Bergen: Bergen Open Research Archive (BORA-UiB) Arctic International Journal of Systematic and Evolutionary Microbiology 69 4 975 981
institution Open Polar
collection University of Bergen: Bergen Open Research Archive (BORA-UiB)
op_collection_id ftunivbergen
language English
description A bacterial strain, designated BAR1T, was isolated from a microbial mat growing on the surface of a barite chimney at the Loki’s Castle Vent Field, at a depth of 2216 m. Cells of strain BAR1T were rod-shaped, Gram-reaction-negative and grew on marine broth 2216 at 10–37 °C (optimum 27–35 °C), pH 5.5–8.0 (optimum pH 6.5–7.5) and 0.5–5.0 % NaCl (optimum 2 %). The DNA G+C content was 57.38 mol%. The membrane-associated major ubiquinone was Q-10, the fatty acid profile was dominated by C18 : 1ω7c (91 %), and the polar lipids detected were phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine, one unidentified aminolipid, one unidentified lipid and one unidentified phospholipid. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain BAR1T clustered together with Rhodobacterales bacterium PRT1, as well as the genera Halocynthiibacter and Pseudohalocynthiibacter in a polyphyletic clade within the Roseobacter clade. Several characteristics differentiate strain BAR1T from the aforementioned genera, including its motility, its piezophilic behaviour and its ability to grow at 35 °C and under anaerobic conditions. Accordingly, strain BAR1T is considered to represent a novel genus and species within the Roseobacter clade, for which the name Profundibacter amoris gen. nov., sp. nov. is proposed. The type strain is Profundibacter amoris BAR1T (=JCM 31874T=DSM 104147T). acceptedVersion
format Article in Journal/Newspaper
author Le Moine Bauer, Sven
Sjøberg, Andreas Gilje
L´Haridon, Stephane
Stokke, Runar
Roalkvam, Irene
Steen, Ida Helene
Dahle, Håkon
spellingShingle Le Moine Bauer, Sven
Sjøberg, Andreas Gilje
L´Haridon, Stephane
Stokke, Runar
Roalkvam, Irene
Steen, Ida Helene
Dahle, Håkon
Profundibacter amoris gen. nov., sp. nov., a new member of the Roseobacter clade isolated from Loki's Castle Vent Field on the Arctic Mid-Ocean Ridge
author_facet Le Moine Bauer, Sven
Sjøberg, Andreas Gilje
L´Haridon, Stephane
Stokke, Runar
Roalkvam, Irene
Steen, Ida Helene
Dahle, Håkon
author_sort Le Moine Bauer, Sven
title Profundibacter amoris gen. nov., sp. nov., a new member of the Roseobacter clade isolated from Loki's Castle Vent Field on the Arctic Mid-Ocean Ridge
title_short Profundibacter amoris gen. nov., sp. nov., a new member of the Roseobacter clade isolated from Loki's Castle Vent Field on the Arctic Mid-Ocean Ridge
title_full Profundibacter amoris gen. nov., sp. nov., a new member of the Roseobacter clade isolated from Loki's Castle Vent Field on the Arctic Mid-Ocean Ridge
title_fullStr Profundibacter amoris gen. nov., sp. nov., a new member of the Roseobacter clade isolated from Loki's Castle Vent Field on the Arctic Mid-Ocean Ridge
title_full_unstemmed Profundibacter amoris gen. nov., sp. nov., a new member of the Roseobacter clade isolated from Loki's Castle Vent Field on the Arctic Mid-Ocean Ridge
title_sort profundibacter amoris gen. nov., sp. nov., a new member of the roseobacter clade isolated from loki's castle vent field on the arctic mid-ocean ridge
publisher Microbiology Society
publishDate 2020
url https://hdl.handle.net/1956/23504
https://doi.org/10.1099/ijsem.0.003234
geographic Arctic
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genre Arctic
genre_facet Arctic
op_source International Journal of Systematic and Evolutionary Microbiology
op_relation urn:issn:1466-5034
urn:issn:1466-5026
https://hdl.handle.net/1956/23504
https://doi.org/10.1099/ijsem.0.003234
cristin:1677450
op_rights Attribution CC BY
http://creativecommons.org/licenses/by/4.0
Copyright 2019 IUMS
op_doi https://doi.org/10.1099/ijsem.0.003234
container_title International Journal of Systematic and Evolutionary Microbiology
container_volume 69
container_issue 4
container_start_page 975
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