Assessing the performance of statistical classifiers to discriminate fish stocks using Fourier analysis of otolith shape

The assignment of individual fish to its stock of origin is important for reliable stock assessment and fisheries management. Otolith shape is commonly used as the marker of distinct stocks in discrimination studies. Our literature review showed that the application and comparison of alternative sta...

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Published in:Canadian Journal of Fisheries and Aquatic Sciences
Main Authors: Smoliński, Szymon, Schade, Franziska M., Berg, Florian
Format: Article in Journal/Newspaper
Language:English
Published: NRC Research Press 2020
Subjects:
Online Access:http://hdl.handle.net/1956/22564
https://doi.org/10.1139/cjfas-2019-0251
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spelling ftunivbergen:oai:bora.uib.no:1956/22564 2023-05-15T15:27:32+02:00 Assessing the performance of statistical classifiers to discriminate fish stocks using Fourier analysis of otolith shape Smoliński, Szymon Schade, Franziska M. Berg, Florian 2020-01-10T12:43:15Z application/pdf http://hdl.handle.net/1956/22564 https://doi.org/10.1139/cjfas-2019-0251 eng eng NRC Research Press urn:issn:0706-652X urn:issn:1205-7533 http://hdl.handle.net/1956/22564 https://doi.org/10.1139/cjfas-2019-0251 cristin:1739420 Attribution CC BY http://creativecommons.org/licenses/by/4.0/ Copyright 2019 The Authors Canadian Journal of Fisheries and Aquatic Sciences Peer reviewed Journal article 2020 ftunivbergen https://doi.org/10.1139/cjfas-2019-0251 2023-03-14T17:43:28Z The assignment of individual fish to its stock of origin is important for reliable stock assessment and fisheries management. Otolith shape is commonly used as the marker of distinct stocks in discrimination studies. Our literature review showed that the application and comparison of alternative statistical classifiers to discriminate fish stocks based on otolith shape is limited. Therefore, we compared the performance of two traditional and four machine learning classifiers based on Fourier analysis of otolith shape using selected stocks of Atlantic cod (Gadus morhua) in the southern Baltic and Atlantic herring (Clupea harengus) in the western Norwegian Sea, Skagerrak and the southern Baltic Sea. Our results showed that the stocks can be successfully discriminated based on their otolith shapes. We observed significant differences in the accuracy obtained by the tested classifiers. For both species, support vector machines (SVM) resulted in the highest classification accuracy. These findings suggest that modern machine learning algorithms, like SVM, can help to improve the accuracy of fish stock discrimination systems based on the otolith shape. publishedVersion Article in Journal/Newspaper atlantic cod Gadus morhua Norwegian Sea University of Bergen: Bergen Open Research Archive (BORA-UiB) Norwegian Sea Canadian Journal of Fisheries and Aquatic Sciences 77 4 674 683
institution Open Polar
collection University of Bergen: Bergen Open Research Archive (BORA-UiB)
op_collection_id ftunivbergen
language English
description The assignment of individual fish to its stock of origin is important for reliable stock assessment and fisheries management. Otolith shape is commonly used as the marker of distinct stocks in discrimination studies. Our literature review showed that the application and comparison of alternative statistical classifiers to discriminate fish stocks based on otolith shape is limited. Therefore, we compared the performance of two traditional and four machine learning classifiers based on Fourier analysis of otolith shape using selected stocks of Atlantic cod (Gadus morhua) in the southern Baltic and Atlantic herring (Clupea harengus) in the western Norwegian Sea, Skagerrak and the southern Baltic Sea. Our results showed that the stocks can be successfully discriminated based on their otolith shapes. We observed significant differences in the accuracy obtained by the tested classifiers. For both species, support vector machines (SVM) resulted in the highest classification accuracy. These findings suggest that modern machine learning algorithms, like SVM, can help to improve the accuracy of fish stock discrimination systems based on the otolith shape. publishedVersion
format Article in Journal/Newspaper
author Smoliński, Szymon
Schade, Franziska M.
Berg, Florian
spellingShingle Smoliński, Szymon
Schade, Franziska M.
Berg, Florian
Assessing the performance of statistical classifiers to discriminate fish stocks using Fourier analysis of otolith shape
author_facet Smoliński, Szymon
Schade, Franziska M.
Berg, Florian
author_sort Smoliński, Szymon
title Assessing the performance of statistical classifiers to discriminate fish stocks using Fourier analysis of otolith shape
title_short Assessing the performance of statistical classifiers to discriminate fish stocks using Fourier analysis of otolith shape
title_full Assessing the performance of statistical classifiers to discriminate fish stocks using Fourier analysis of otolith shape
title_fullStr Assessing the performance of statistical classifiers to discriminate fish stocks using Fourier analysis of otolith shape
title_full_unstemmed Assessing the performance of statistical classifiers to discriminate fish stocks using Fourier analysis of otolith shape
title_sort assessing the performance of statistical classifiers to discriminate fish stocks using fourier analysis of otolith shape
publisher NRC Research Press
publishDate 2020
url http://hdl.handle.net/1956/22564
https://doi.org/10.1139/cjfas-2019-0251
geographic Norwegian Sea
geographic_facet Norwegian Sea
genre atlantic cod
Gadus morhua
Norwegian Sea
genre_facet atlantic cod
Gadus morhua
Norwegian Sea
op_source Canadian Journal of Fisheries and Aquatic Sciences
op_relation urn:issn:0706-652X
urn:issn:1205-7533
http://hdl.handle.net/1956/22564
https://doi.org/10.1139/cjfas-2019-0251
cristin:1739420
op_rights Attribution CC BY
http://creativecommons.org/licenses/by/4.0/
Copyright 2019 The Authors
op_doi https://doi.org/10.1139/cjfas-2019-0251
container_title Canadian Journal of Fisheries and Aquatic Sciences
container_volume 77
container_issue 4
container_start_page 674
op_container_end_page 683
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