A simple adjustment to test reliability of bacterivory rates derived from the dilution method

Quantification of grazing losses of marine heterotrophic bacteria is critical for understanding nutrient and carbon pathways in aquatic systems. The dilution method is a commonly used experimental approach for quantifying bacterivory. However, valid estimates of grazing rates obtained using this met...

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Published in:Limnology and Oceanography: Methods
Main Authors: Pree, Bernadette, Kuhlisch, Constanze, Pohnert, Georg, Sazhin, Andrey, Jakobsen, Hans Henrik, Paulsen, Maria Lund, Frischer, Marc E., Stoecker, Diane K., Nejstgaard, Jens C., Larsen, Aud
Format: Article in Journal/Newspaper
Language:English
Published: Wiley 2017
Subjects:
Online Access:https://hdl.handle.net/1956/16212
https://doi.org/10.1002/lom3.10076
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spelling ftunivbergen:oai:bora.uib.no:1956/16212 2023-05-15T15:08:35+02:00 A simple adjustment to test reliability of bacterivory rates derived from the dilution method Pree, Bernadette Kuhlisch, Constanze Pohnert, Georg Sazhin, Andrey Jakobsen, Hans Henrik Paulsen, Maria Lund Frischer, Marc E. Stoecker, Diane K. Nejstgaard, Jens C. Larsen, Aud 2017-05-10T09:25:03Z application/pdf https://hdl.handle.net/1956/16212 https://doi.org/10.1002/lom3.10076 eng eng Wiley urn:issn:1541-5856 https://hdl.handle.net/1956/16212 https://doi.org/10.1002/lom3.10076 cristin:1424829 Attribution CC BY-NC-ND http://creativecommons.org/licenses/by-nc-nd/4.0/ Copyright 2015 The Author(s) Limnology and Oceanography : Methods Peer reviewed Journal article 2017 ftunivbergen https://doi.org/10.1002/lom3.10076 2023-03-14T17:38:50Z Quantification of grazing losses of marine heterotrophic bacteria is critical for understanding nutrient and carbon pathways in aquatic systems. The dilution method is a commonly used experimental approach for quantifying bacterivory. However, valid estimates of grazing rates obtained using this method depend on several methodological assumptions including that the method does not influence specific growth rates of bacteria. Here, we hypothesize that filtration during the set-up of a dilution experiment has the potential to release allelochemicals from phytoplankton cells and thereby stimulate or inhibit bacterial growth with the consequence of biased grazing estimates. We tested this hypothesis during a natural Phaeocystis pouchetii bloom at two different locations within an Arctic fjord. Results from the dilution experiments suggest higher gross growth rate and grazing impact for bacteria in the outer fjord compared with the inner fjord. However, specific growth rates estimated by bacterial production cell−1 were significantly elevated in dilutions of water from the outer fjord but not the inner fjord. The analysis of dissolved metabolites in the seawater from both experiments prior and after filtration revealed altered metabolic profiles after filtration at both stations. As unaffected specific growth of prey on dilution is one of three fundamental assumptions of the dilution method, we conclude that it is important that empirically estimated bacterial specific growth rates be routinely included when using the dilution method to quantify bacterivory. publishedVersion Article in Journal/Newspaper Arctic Phytoplankton University of Bergen: Bergen Open Research Archive (BORA-UiB) Arctic Limnology and Oceanography: Methods 14 2 114 123
institution Open Polar
collection University of Bergen: Bergen Open Research Archive (BORA-UiB)
op_collection_id ftunivbergen
language English
description Quantification of grazing losses of marine heterotrophic bacteria is critical for understanding nutrient and carbon pathways in aquatic systems. The dilution method is a commonly used experimental approach for quantifying bacterivory. However, valid estimates of grazing rates obtained using this method depend on several methodological assumptions including that the method does not influence specific growth rates of bacteria. Here, we hypothesize that filtration during the set-up of a dilution experiment has the potential to release allelochemicals from phytoplankton cells and thereby stimulate or inhibit bacterial growth with the consequence of biased grazing estimates. We tested this hypothesis during a natural Phaeocystis pouchetii bloom at two different locations within an Arctic fjord. Results from the dilution experiments suggest higher gross growth rate and grazing impact for bacteria in the outer fjord compared with the inner fjord. However, specific growth rates estimated by bacterial production cell−1 were significantly elevated in dilutions of water from the outer fjord but not the inner fjord. The analysis of dissolved metabolites in the seawater from both experiments prior and after filtration revealed altered metabolic profiles after filtration at both stations. As unaffected specific growth of prey on dilution is one of three fundamental assumptions of the dilution method, we conclude that it is important that empirically estimated bacterial specific growth rates be routinely included when using the dilution method to quantify bacterivory. publishedVersion
format Article in Journal/Newspaper
author Pree, Bernadette
Kuhlisch, Constanze
Pohnert, Georg
Sazhin, Andrey
Jakobsen, Hans Henrik
Paulsen, Maria Lund
Frischer, Marc E.
Stoecker, Diane K.
Nejstgaard, Jens C.
Larsen, Aud
spellingShingle Pree, Bernadette
Kuhlisch, Constanze
Pohnert, Georg
Sazhin, Andrey
Jakobsen, Hans Henrik
Paulsen, Maria Lund
Frischer, Marc E.
Stoecker, Diane K.
Nejstgaard, Jens C.
Larsen, Aud
A simple adjustment to test reliability of bacterivory rates derived from the dilution method
author_facet Pree, Bernadette
Kuhlisch, Constanze
Pohnert, Georg
Sazhin, Andrey
Jakobsen, Hans Henrik
Paulsen, Maria Lund
Frischer, Marc E.
Stoecker, Diane K.
Nejstgaard, Jens C.
Larsen, Aud
author_sort Pree, Bernadette
title A simple adjustment to test reliability of bacterivory rates derived from the dilution method
title_short A simple adjustment to test reliability of bacterivory rates derived from the dilution method
title_full A simple adjustment to test reliability of bacterivory rates derived from the dilution method
title_fullStr A simple adjustment to test reliability of bacterivory rates derived from the dilution method
title_full_unstemmed A simple adjustment to test reliability of bacterivory rates derived from the dilution method
title_sort simple adjustment to test reliability of bacterivory rates derived from the dilution method
publisher Wiley
publishDate 2017
url https://hdl.handle.net/1956/16212
https://doi.org/10.1002/lom3.10076
geographic Arctic
geographic_facet Arctic
genre Arctic
Phytoplankton
genre_facet Arctic
Phytoplankton
op_source Limnology and Oceanography : Methods
op_relation urn:issn:1541-5856
https://hdl.handle.net/1956/16212
https://doi.org/10.1002/lom3.10076
cristin:1424829
op_rights Attribution CC BY-NC-ND
http://creativecommons.org/licenses/by-nc-nd/4.0/
Copyright 2015 The Author(s)
op_doi https://doi.org/10.1002/lom3.10076
container_title Limnology and Oceanography: Methods
container_volume 14
container_issue 2
container_start_page 114
op_container_end_page 123
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