Deep-sea sponge derived environmental DNA analysis reveals demersal fish biodiversity of a remote Arctic ecosystem
The deep-sea is vast, remote, and largely underexplored. However, methodological advances in environmental DNA (eDNA) surveys could aid in the exploration efforts, such as using sponges as natural eDNA filters for studying fish biodiversity. In this study, we analyzed the eDNA from 116 sponge tissue...
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Online Access: | https://hdl.handle.net/11250/3090440 https://doi.org/10.1002/edn3.451 |
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ftunivbergen:oai:bora.uib.no:11250/3090440 2023-10-09T21:48:45+02:00 Deep-sea sponge derived environmental DNA analysis reveals demersal fish biodiversity of a remote Arctic ecosystem Brodnicke, Ole Bjørn Meyer, Heidi Kristina Busch, Kathrin Xavier, Joana R. Knudsen, Steen Wilhelm Møller, Peter Daniel Rask Hentschel, Ute Humeida Sweet, Michael John 2023 application/pdf https://hdl.handle.net/11250/3090440 https://doi.org/10.1002/edn3.451 eng eng Wiley urn:issn:2637-4943 https://hdl.handle.net/11250/3090440 https://doi.org/10.1002/edn3.451 cristin:2174983 Environmental DNA. 2023. Navngivelse-Ikkekommersiell 4.0 Internasjonal http://creativecommons.org/licenses/by-nc/4.0/deed.no Copyright 2023 The Author(s) Environmental DNA Journal article Peer reviewed 2023 ftunivbergen https://doi.org/10.1002/edn3.451 2023-09-20T23:08:18Z The deep-sea is vast, remote, and largely underexplored. However, methodological advances in environmental DNA (eDNA) surveys could aid in the exploration efforts, such as using sponges as natural eDNA filters for studying fish biodiversity. In this study, we analyzed the eDNA from 116 sponge tissue samples and compared these to 18 water eDNA samples and visual surveys obtained on an Arctic seamount. Across survey methods, we revealed approximately 30% of the species presumed to inhabit this area and 11 fish species were detected via sponge derived eDNA alone. These included commercially important fish such as the Greenland halibut and Atlantic mackerel. Fish eDNA detection was highly variable across sponge samples. Highest detection rates were found in sponges with low microbial activity such as those from the class Hexactinellida. The different survey methods also detected alternate fish communities, highlighted by only one species overlap between the visual surveys and the sponge eDNA samples. Therefore, we conclude that sponge eDNA can be a useful tool for surveying deep-sea demersal fish communities and it synergises with visual surveys improving overall biodiversity assessments. Datasets such as this can form comprehensive baselines on fish biodiversity across seamounts, which in turn can inform marine management and conservation practices in the regions where such surveys are undertaken. publishedVersion Article in Journal/Newspaper Arctic Greenland University of Bergen: Bergen Open Research Archive (BORA-UiB) Arctic Greenland Environmental DNA |
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Open Polar |
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University of Bergen: Bergen Open Research Archive (BORA-UiB) |
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ftunivbergen |
language |
English |
description |
The deep-sea is vast, remote, and largely underexplored. However, methodological advances in environmental DNA (eDNA) surveys could aid in the exploration efforts, such as using sponges as natural eDNA filters for studying fish biodiversity. In this study, we analyzed the eDNA from 116 sponge tissue samples and compared these to 18 water eDNA samples and visual surveys obtained on an Arctic seamount. Across survey methods, we revealed approximately 30% of the species presumed to inhabit this area and 11 fish species were detected via sponge derived eDNA alone. These included commercially important fish such as the Greenland halibut and Atlantic mackerel. Fish eDNA detection was highly variable across sponge samples. Highest detection rates were found in sponges with low microbial activity such as those from the class Hexactinellida. The different survey methods also detected alternate fish communities, highlighted by only one species overlap between the visual surveys and the sponge eDNA samples. Therefore, we conclude that sponge eDNA can be a useful tool for surveying deep-sea demersal fish communities and it synergises with visual surveys improving overall biodiversity assessments. Datasets such as this can form comprehensive baselines on fish biodiversity across seamounts, which in turn can inform marine management and conservation practices in the regions where such surveys are undertaken. publishedVersion |
format |
Article in Journal/Newspaper |
author |
Brodnicke, Ole Bjørn Meyer, Heidi Kristina Busch, Kathrin Xavier, Joana R. Knudsen, Steen Wilhelm Møller, Peter Daniel Rask Hentschel, Ute Humeida Sweet, Michael John |
spellingShingle |
Brodnicke, Ole Bjørn Meyer, Heidi Kristina Busch, Kathrin Xavier, Joana R. Knudsen, Steen Wilhelm Møller, Peter Daniel Rask Hentschel, Ute Humeida Sweet, Michael John Deep-sea sponge derived environmental DNA analysis reveals demersal fish biodiversity of a remote Arctic ecosystem |
author_facet |
Brodnicke, Ole Bjørn Meyer, Heidi Kristina Busch, Kathrin Xavier, Joana R. Knudsen, Steen Wilhelm Møller, Peter Daniel Rask Hentschel, Ute Humeida Sweet, Michael John |
author_sort |
Brodnicke, Ole Bjørn |
title |
Deep-sea sponge derived environmental DNA analysis reveals demersal fish biodiversity of a remote Arctic ecosystem |
title_short |
Deep-sea sponge derived environmental DNA analysis reveals demersal fish biodiversity of a remote Arctic ecosystem |
title_full |
Deep-sea sponge derived environmental DNA analysis reveals demersal fish biodiversity of a remote Arctic ecosystem |
title_fullStr |
Deep-sea sponge derived environmental DNA analysis reveals demersal fish biodiversity of a remote Arctic ecosystem |
title_full_unstemmed |
Deep-sea sponge derived environmental DNA analysis reveals demersal fish biodiversity of a remote Arctic ecosystem |
title_sort |
deep-sea sponge derived environmental dna analysis reveals demersal fish biodiversity of a remote arctic ecosystem |
publisher |
Wiley |
publishDate |
2023 |
url |
https://hdl.handle.net/11250/3090440 https://doi.org/10.1002/edn3.451 |
geographic |
Arctic Greenland |
geographic_facet |
Arctic Greenland |
genre |
Arctic Greenland |
genre_facet |
Arctic Greenland |
op_source |
Environmental DNA |
op_relation |
urn:issn:2637-4943 https://hdl.handle.net/11250/3090440 https://doi.org/10.1002/edn3.451 cristin:2174983 Environmental DNA. 2023. |
op_rights |
Navngivelse-Ikkekommersiell 4.0 Internasjonal http://creativecommons.org/licenses/by-nc/4.0/deed.no Copyright 2023 The Author(s) |
op_doi |
https://doi.org/10.1002/edn3.451 |
container_title |
Environmental DNA |
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1779311830026420224 |