Validation of Atlantic salmon (Salmo salar) weight estimation by stereo camera, and morphometric analysis for assessment of growth performance and maturation status

Stereo image analysis of free-swimming farmed Atlantic salmon is today used for purposes such as individual size estimation and sea lice counting. This technology may in the future be used to score welfare and life history traits. This thesis aims for answering: 1. whether current stereo camera imag...

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Bibliographic Details
Main Author: Lange, Tina Emilie Lee
Format: Master Thesis
Language:English
Published: The University of Bergen 2021
Subjects:
Online Access:https://hdl.handle.net/11250/2757465
id ftunivbergen:oai:bora.uib.no:11250/2757465
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spelling ftunivbergen:oai:bora.uib.no:11250/2757465 2023-05-15T15:31:30+02:00 Validation of Atlantic salmon (Salmo salar) weight estimation by stereo camera, and morphometric analysis for assessment of growth performance and maturation status Lange, Tina Emilie Lee 2021-06-02T22:00:02Z application/pdf https://hdl.handle.net/11250/2757465 eng eng The University of Bergen https://hdl.handle.net/11250/2757465 Copyright the Author. All rights reserved individual growth sexual maturation morphometrics size estimation image analysis populational growth stereo camera growth performance weight estimation Atlantic salmon 751999 Master thesis 2021 ftunivbergen 2023-03-14T17:43:37Z Stereo image analysis of free-swimming farmed Atlantic salmon is today used for purposes such as individual size estimation and sea lice counting. This technology may in the future be used to score welfare and life history traits. This thesis aims for answering: 1. whether current stereo camera image analysis of size estimation reflects the true size distribution of caged salmon, and 2. whether morphometrical relationships of individual salmon, measured in images, can provide novel insights to growth performance and detection of sexual maturation. The data was collected from an experimental cage production with individually PIT-tagged salmon (n=4500 and n=2786 at harvest) that were manually size recorded multiple times over the production cycle. Stereo images were taken within the sea cage during the last 6 months prior to harvest. Individual images taken at harvest were linked with PIT-ID to enable individual comparison of recorded morphometrics with growth history. Stereo images allow for frequent and numerous measurements of free-swimming salmon, but the precision in estimating individual fish size and accuracy of size distribution within sea cages are largely undocumented. Weight estimations of free-swimming fish based on stereo image analysis are here compared with the true size distribution of the fish at the average weights 2.0, 4.0 and 5.5kg, including a comparison at an individual level by the stereo images taken at harvest. The results show that stereo image analysis gives a highly accurate weight estimation on an individual and populational level, but can to some degree be sensitive to fish size segregation in swimming depth. Morphometrical relationships of the salmon body, and knowledge of how this reflects the growth performance and sexual maturation is largely underexplored. The morphometric analysis includes the ratios of body height central/anal, eye diameter and head size vs. standard length, and are here compared with the harvest size of the fish, individual growth, and sexual maturation ... Master Thesis Atlantic salmon Salmo salar University of Bergen: Bergen Open Research Archive (BORA-UiB)
institution Open Polar
collection University of Bergen: Bergen Open Research Archive (BORA-UiB)
op_collection_id ftunivbergen
language English
topic individual growth
sexual maturation
morphometrics
size estimation
image analysis
populational growth
stereo camera
growth performance
weight estimation
Atlantic salmon
751999
spellingShingle individual growth
sexual maturation
morphometrics
size estimation
image analysis
populational growth
stereo camera
growth performance
weight estimation
Atlantic salmon
751999
Lange, Tina Emilie Lee
Validation of Atlantic salmon (Salmo salar) weight estimation by stereo camera, and morphometric analysis for assessment of growth performance and maturation status
topic_facet individual growth
sexual maturation
morphometrics
size estimation
image analysis
populational growth
stereo camera
growth performance
weight estimation
Atlantic salmon
751999
description Stereo image analysis of free-swimming farmed Atlantic salmon is today used for purposes such as individual size estimation and sea lice counting. This technology may in the future be used to score welfare and life history traits. This thesis aims for answering: 1. whether current stereo camera image analysis of size estimation reflects the true size distribution of caged salmon, and 2. whether morphometrical relationships of individual salmon, measured in images, can provide novel insights to growth performance and detection of sexual maturation. The data was collected from an experimental cage production with individually PIT-tagged salmon (n=4500 and n=2786 at harvest) that were manually size recorded multiple times over the production cycle. Stereo images were taken within the sea cage during the last 6 months prior to harvest. Individual images taken at harvest were linked with PIT-ID to enable individual comparison of recorded morphometrics with growth history. Stereo images allow for frequent and numerous measurements of free-swimming salmon, but the precision in estimating individual fish size and accuracy of size distribution within sea cages are largely undocumented. Weight estimations of free-swimming fish based on stereo image analysis are here compared with the true size distribution of the fish at the average weights 2.0, 4.0 and 5.5kg, including a comparison at an individual level by the stereo images taken at harvest. The results show that stereo image analysis gives a highly accurate weight estimation on an individual and populational level, but can to some degree be sensitive to fish size segregation in swimming depth. Morphometrical relationships of the salmon body, and knowledge of how this reflects the growth performance and sexual maturation is largely underexplored. The morphometric analysis includes the ratios of body height central/anal, eye diameter and head size vs. standard length, and are here compared with the harvest size of the fish, individual growth, and sexual maturation ...
format Master Thesis
author Lange, Tina Emilie Lee
author_facet Lange, Tina Emilie Lee
author_sort Lange, Tina Emilie Lee
title Validation of Atlantic salmon (Salmo salar) weight estimation by stereo camera, and morphometric analysis for assessment of growth performance and maturation status
title_short Validation of Atlantic salmon (Salmo salar) weight estimation by stereo camera, and morphometric analysis for assessment of growth performance and maturation status
title_full Validation of Atlantic salmon (Salmo salar) weight estimation by stereo camera, and morphometric analysis for assessment of growth performance and maturation status
title_fullStr Validation of Atlantic salmon (Salmo salar) weight estimation by stereo camera, and morphometric analysis for assessment of growth performance and maturation status
title_full_unstemmed Validation of Atlantic salmon (Salmo salar) weight estimation by stereo camera, and morphometric analysis for assessment of growth performance and maturation status
title_sort validation of atlantic salmon (salmo salar) weight estimation by stereo camera, and morphometric analysis for assessment of growth performance and maturation status
publisher The University of Bergen
publishDate 2021
url https://hdl.handle.net/11250/2757465
genre Atlantic salmon
Salmo salar
genre_facet Atlantic salmon
Salmo salar
op_relation https://hdl.handle.net/11250/2757465
op_rights Copyright the Author. All rights reserved
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