GenBank sequence assessment for species assignment - control region sequences published for baleen whales in 2007

The tree-based methods in DNA Surveillance, in conjunction with the curated reference sequence alignments known as Witness for the Whales, were used to assign species identities to the 499 sequences from baleen whales published in Genbank during 2007. All of the sequences were assigned to the same s...

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Bibliographic Details
Main Authors: Ross, HA, Shearman, HM
Format: Report
Language:unknown
Published: Sci. C'tee of the Int'l Whaling Comm. 2009
Subjects:
baleen whales
Blue whale
minke whale
Online Access:http://hdl.handle.net/2292/8449
id ftunivauckland:oai:researchspace.auckland.ac.nz:2292/8449
record_format openpolar
spelling ftunivauckland:oai:researchspace.auckland.ac.nz:2292/8449 2023-05-15T15:37:05+02:00 GenBank sequence assessment for species assignment - control region sequences published for baleen whales in 2007 Ross, HA Shearman, HM 2009 http://hdl.handle.net/2292/8449 unknown Sci. C'tee of the Int'l Whaling Comm. Items in ResearchSpace are protected by copyright, with all rights reserved, unless otherwise indicated. Previously published items are made available in accordance with the copyright policy of the publisher. https://researchspace.auckland.ac.nz/docs/uoa-docs/rights.htm Copyright: Sci. C'tee of the Int'l Whaling Comm. http://purl.org/eprint/accessRights/RestrictedAccess http://iwcoffice.org/_documents/sci_com/SC61docs/SC-61-SD3.pdf Report 2009 ftunivauckland 2013-01-22T00:21:10Z The tree-based methods in DNA Surveillance, in conjunction with the curated reference sequence alignments known as Witness for the Whales, were used to assign species identities to the 499 sequences from baleen whales published in Genbank during 2007. All of the sequences were assigned to the same species as that recorded in Genbank. For the common minke whale, 73 of the 74 sequences were not indentified in Genbank as belonging to one of the subspecies, while they could be assigned unambiguously using the WFTW references. There was uncertainty regarding whether blue whale sequences could be assigned to a subspecies. All of the sequences appeared to be of reliable quality. No geographic information was recorded for nearly all of the sequences. Report baleen whales Blue whale minke whale University of Auckland Research Repository - ResearchSpace
institution Open Polar
collection University of Auckland Research Repository - ResearchSpace
op_collection_id ftunivauckland
language unknown
description The tree-based methods in DNA Surveillance, in conjunction with the curated reference sequence alignments known as Witness for the Whales, were used to assign species identities to the 499 sequences from baleen whales published in Genbank during 2007. All of the sequences were assigned to the same species as that recorded in Genbank. For the common minke whale, 73 of the 74 sequences were not indentified in Genbank as belonging to one of the subspecies, while they could be assigned unambiguously using the WFTW references. There was uncertainty regarding whether blue whale sequences could be assigned to a subspecies. All of the sequences appeared to be of reliable quality. No geographic information was recorded for nearly all of the sequences.
format Report
author Ross, HA
Shearman, HM
spellingShingle Ross, HA
Shearman, HM
GenBank sequence assessment for species assignment - control region sequences published for baleen whales in 2007
author_facet Ross, HA
Shearman, HM
author_sort Ross, HA
title GenBank sequence assessment for species assignment - control region sequences published for baleen whales in 2007
title_short GenBank sequence assessment for species assignment - control region sequences published for baleen whales in 2007
title_full GenBank sequence assessment for species assignment - control region sequences published for baleen whales in 2007
title_fullStr GenBank sequence assessment for species assignment - control region sequences published for baleen whales in 2007
title_full_unstemmed GenBank sequence assessment for species assignment - control region sequences published for baleen whales in 2007
title_sort genbank sequence assessment for species assignment - control region sequences published for baleen whales in 2007
publisher Sci. C'tee of the Int'l Whaling Comm.
publishDate 2009
url http://hdl.handle.net/2292/8449
genre baleen whales
Blue whale
minke whale
genre_facet baleen whales
Blue whale
minke whale
op_source http://iwcoffice.org/_documents/sci_com/SC61docs/SC-61-SD3.pdf
op_rights Items in ResearchSpace are protected by copyright, with all rights reserved, unless otherwise indicated. Previously published items are made available in accordance with the copyright policy of the publisher.
https://researchspace.auckland.ac.nz/docs/uoa-docs/rights.htm
Copyright: Sci. C'tee of the Int'l Whaling Comm.
http://purl.org/eprint/accessRights/RestrictedAccess
_version_ 1766367533641760768

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