Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions

Methane hydrates are important from a scientific and industrial perspective, and form by nucleation and growth from a supersaturated aqueous solution of methane. Molecular simulation is able to shed light on the process of homogeneous nucleation of hydrates, using straightforward molecular dynamics...

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Published in:The Journal of Chemical Physics
Main Authors: Arjun, A., Bolhuis, P.G.
Format: Article in Journal/Newspaper
Language:English
Published: 2023
Subjects:
Online Access:https://dare.uva.nl/personal/pure/en/publications/homogeneous-nucleation-of-crystalline-methane-hydrate-in-molecular-dynamics-transition-paths-sampled-under-realistic-conditions(70e72f2d-c79d-4651-957e-79f4be58a344).html
https://doi.org/10.1063/5.0124852
https://hdl.handle.net/11245.1/70e72f2d-c79d-4651-957e-79f4be58a344
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spelling ftunivamstpubl:oai:dare.uva.nl:openaire_cris_publications/70e72f2d-c79d-4651-957e-79f4be58a344 2024-09-30T14:38:31+00:00 Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions Arjun, A. Bolhuis, P.G. 2023-01-28 https://dare.uva.nl/personal/pure/en/publications/homogeneous-nucleation-of-crystalline-methane-hydrate-in-molecular-dynamics-transition-paths-sampled-under-realistic-conditions(70e72f2d-c79d-4651-957e-79f4be58a344).html https://doi.org/10.1063/5.0124852 https://hdl.handle.net/11245.1/70e72f2d-c79d-4651-957e-79f4be58a344 eng eng https://dare.uva.nl/personal/pure/en/publications/homogeneous-nucleation-of-crystalline-methane-hydrate-in-molecular-dynamics-transition-paths-sampled-under-realistic-conditions(70e72f2d-c79d-4651-957e-79f4be58a344).html info:eu-repo/semantics/closedAccess Arjun , A & Bolhuis , P G 2023 , ' Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions ' , Journal of Chemical Physics , vol. 158 , no. 4 , 044504 . https://doi.org/10.1063/5.0124852 article 2023 ftunivamstpubl https://doi.org/10.1063/5.0124852 2024-09-12T16:38:41Z Methane hydrates are important from a scientific and industrial perspective, and form by nucleation and growth from a supersaturated aqueous solution of methane. Molecular simulation is able to shed light on the process of homogeneous nucleation of hydrates, using straightforward molecular dynamics or rare event enhanced sampling techniques with atomistic and coarse grained force fields. In our previous work [Arjun, T. A. Berendsen, and P. G. Bolhuis, Proc. Natl. Acad. Sci. U. S. A. 116, 19305 (2019)], we performed transition path sampling (TPS) simulations using all atom force fields under moderate driving forces at high pressure, which enabled unbiased atomistic insight into the formation of methane hydrates. The supersaturation in these simulations was influenced by the Laplace pressure induced by the spherical gas reservoir. Here, we investigate the effect of removing this influence. Focusing on the supercooled, supersaturated regime to keep the system size tractable, our TPS simulations indicate that nuclei form amorphous structures below roughly 260 K and crystalline sI structures above 260 K. For these temperatures, the average transition path lengths are significantly longer than in our previous study, pushing the boundaries of what can be achieved with TPS. The temperature to observe a critical nucleus of certain size was roughly 20 K lower compared to a spherical reservoir due to the lower concentration of methane in the solution, yielding a reduced driving force. We analyze the TPS results using a model based on classical nucleation theory. The corresponding free energy barriers are estimated and found to be consistent with previous predictions, thus adding to the overall picture of the hydrate formation process. Article in Journal/Newspaper Methane hydrate Universiteit van Amsterdam: Digital Academic Repository (UvA DARE) Laplace ENVELOPE(141.467,141.467,-66.782,-66.782) The Journal of Chemical Physics 158 4
institution Open Polar
collection Universiteit van Amsterdam: Digital Academic Repository (UvA DARE)
op_collection_id ftunivamstpubl
language English
description Methane hydrates are important from a scientific and industrial perspective, and form by nucleation and growth from a supersaturated aqueous solution of methane. Molecular simulation is able to shed light on the process of homogeneous nucleation of hydrates, using straightforward molecular dynamics or rare event enhanced sampling techniques with atomistic and coarse grained force fields. In our previous work [Arjun, T. A. Berendsen, and P. G. Bolhuis, Proc. Natl. Acad. Sci. U. S. A. 116, 19305 (2019)], we performed transition path sampling (TPS) simulations using all atom force fields under moderate driving forces at high pressure, which enabled unbiased atomistic insight into the formation of methane hydrates. The supersaturation in these simulations was influenced by the Laplace pressure induced by the spherical gas reservoir. Here, we investigate the effect of removing this influence. Focusing on the supercooled, supersaturated regime to keep the system size tractable, our TPS simulations indicate that nuclei form amorphous structures below roughly 260 K and crystalline sI structures above 260 K. For these temperatures, the average transition path lengths are significantly longer than in our previous study, pushing the boundaries of what can be achieved with TPS. The temperature to observe a critical nucleus of certain size was roughly 20 K lower compared to a spherical reservoir due to the lower concentration of methane in the solution, yielding a reduced driving force. We analyze the TPS results using a model based on classical nucleation theory. The corresponding free energy barriers are estimated and found to be consistent with previous predictions, thus adding to the overall picture of the hydrate formation process.
format Article in Journal/Newspaper
author Arjun, A.
Bolhuis, P.G.
spellingShingle Arjun, A.
Bolhuis, P.G.
Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions
author_facet Arjun, A.
Bolhuis, P.G.
author_sort Arjun, A.
title Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions
title_short Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions
title_full Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions
title_fullStr Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions
title_full_unstemmed Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions
title_sort homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions
publishDate 2023
url https://dare.uva.nl/personal/pure/en/publications/homogeneous-nucleation-of-crystalline-methane-hydrate-in-molecular-dynamics-transition-paths-sampled-under-realistic-conditions(70e72f2d-c79d-4651-957e-79f4be58a344).html
https://doi.org/10.1063/5.0124852
https://hdl.handle.net/11245.1/70e72f2d-c79d-4651-957e-79f4be58a344
long_lat ENVELOPE(141.467,141.467,-66.782,-66.782)
geographic Laplace
geographic_facet Laplace
genre Methane hydrate
genre_facet Methane hydrate
op_source Arjun , A & Bolhuis , P G 2023 , ' Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions ' , Journal of Chemical Physics , vol. 158 , no. 4 , 044504 . https://doi.org/10.1063/5.0124852
op_relation https://dare.uva.nl/personal/pure/en/publications/homogeneous-nucleation-of-crystalline-methane-hydrate-in-molecular-dynamics-transition-paths-sampled-under-realistic-conditions(70e72f2d-c79d-4651-957e-79f4be58a344).html
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container_title The Journal of Chemical Physics
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