The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization

The scleractinian coral Acropora millepora is one of the most studied species from the Great Barrier Reef. This species has been used to understand evolutionary, immune and developmental processes in cnidarians. It has also been subject of several ecological studies in order to elucidate reef respon...

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Published in:PLoS ONE
Main Authors: Ramos-Silva, P., Kaandorp, J., Herbst, F., Plasseraud, L., Alcaraz, G., Stern, C., Corneillat, M., Guichard, N., Durlet, C., Luquet, G., Marin, F.
Format: Article in Journal/Newspaper
Language:English
Published: 2014
Subjects:
Online Access:https://dare.uva.nl/personal/pure/en/publications/the-skeleton-of-the-staghorn-coral-acropora-millepora-molecular-and-structural-characterization(0291873f-dd90-4a04-8396-d06481fe0986).html
https://doi.org/10.1371/journal.pone.0097454
https://pure.uva.nl/ws/files/2343571/164752_439973.pdf
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spelling ftunivamstpubl:oai:dare.uva.nl:openaire_cris_publications/0291873f-dd90-4a04-8396-d06481fe0986 2024-09-30T14:40:49+00:00 The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization Ramos-Silva, P. Kaandorp, J. Herbst, F. Plasseraud, L. Alcaraz, G. Stern, C. Corneillat, M. Guichard, N. Durlet, C. Luquet, G. Marin, F. 2014 application/pdf https://dare.uva.nl/personal/pure/en/publications/the-skeleton-of-the-staghorn-coral-acropora-millepora-molecular-and-structural-characterization(0291873f-dd90-4a04-8396-d06481fe0986).html https://doi.org/10.1371/journal.pone.0097454 https://pure.uva.nl/ws/files/2343571/164752_439973.pdf eng eng https://dare.uva.nl/personal/pure/en/publications/the-skeleton-of-the-staghorn-coral-acropora-millepora-molecular-and-structural-characterization(0291873f-dd90-4a04-8396-d06481fe0986).html info:eu-repo/semantics/openAccess Ramos-Silva , P , Kaandorp , J , Herbst , F , Plasseraud , L , Alcaraz , G , Stern , C , Corneillat , M , Guichard , N , Durlet , C , Luquet , G & Marin , F 2014 , ' The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization ' , PLoS ONE , vol. 9 , no. 6 , e97454 . https://doi.org/10.1371/journal.pone.0097454 article 2014 ftunivamstpubl https://doi.org/10.1371/journal.pone.0097454 2024-09-12T16:38:29Z The scleractinian coral Acropora millepora is one of the most studied species from the Great Barrier Reef. This species has been used to understand evolutionary, immune and developmental processes in cnidarians. It has also been subject of several ecological studies in order to elucidate reef responses to environmental changes such as temperature rise and ocean acidification (OA). In these contexts, several nucleic acid resources were made available. When combined to a recent proteomic analysis of the coral skeletal organic matrix (SOM), they enabled the identification of several skeletal matrix proteins, making A. millepora into an emerging model for biomineralization studies. Here we describe the skeletal microstructure of A. millepora skeleton, together with a functional and biochemical characterization of its occluded SOM that focuses on the protein and saccharidic moieties. The skeletal matrix proteins show a large range of isoelectric points, compositional patterns and signatures. Besides secreted proteins, there are a significant number of proteins with membrane attachment sites such as transmembrane domains and GPI anchors as well as proteins with integrin binding sites. These features show that the skeletal proteins must have strong adhesion properties in order to function in the calcifying space. Moreover this data suggest a molecular connection between the calcifying epithelium and the skeletal tissue during biocalcification. In terms of sugar moieties, the enrichment of the SOM in arabinose is striking, and the monosaccharide composition exhibits the same signature as that of mucus of acroporid corals. Finally, we observe that the interaction of the acetic acid soluble SOM on the morphology of in vitro grown CaCO3 crystals is very pronounced when compared with the calcifying matrices of some mollusks. In light of these results, we wish to commend Acropora millepora as a model for biocalcification studies in scleractinians, from molecular and structural viewpoints. Article in Journal/Newspaper Ocean acidification Universiteit van Amsterdam: Digital Academic Repository (UvA DARE) PLoS ONE 9 6 e97454
institution Open Polar
collection Universiteit van Amsterdam: Digital Academic Repository (UvA DARE)
op_collection_id ftunivamstpubl
language English
description The scleractinian coral Acropora millepora is one of the most studied species from the Great Barrier Reef. This species has been used to understand evolutionary, immune and developmental processes in cnidarians. It has also been subject of several ecological studies in order to elucidate reef responses to environmental changes such as temperature rise and ocean acidification (OA). In these contexts, several nucleic acid resources were made available. When combined to a recent proteomic analysis of the coral skeletal organic matrix (SOM), they enabled the identification of several skeletal matrix proteins, making A. millepora into an emerging model for biomineralization studies. Here we describe the skeletal microstructure of A. millepora skeleton, together with a functional and biochemical characterization of its occluded SOM that focuses on the protein and saccharidic moieties. The skeletal matrix proteins show a large range of isoelectric points, compositional patterns and signatures. Besides secreted proteins, there are a significant number of proteins with membrane attachment sites such as transmembrane domains and GPI anchors as well as proteins with integrin binding sites. These features show that the skeletal proteins must have strong adhesion properties in order to function in the calcifying space. Moreover this data suggest a molecular connection between the calcifying epithelium and the skeletal tissue during biocalcification. In terms of sugar moieties, the enrichment of the SOM in arabinose is striking, and the monosaccharide composition exhibits the same signature as that of mucus of acroporid corals. Finally, we observe that the interaction of the acetic acid soluble SOM on the morphology of in vitro grown CaCO3 crystals is very pronounced when compared with the calcifying matrices of some mollusks. In light of these results, we wish to commend Acropora millepora as a model for biocalcification studies in scleractinians, from molecular and structural viewpoints.
format Article in Journal/Newspaper
author Ramos-Silva, P.
Kaandorp, J.
Herbst, F.
Plasseraud, L.
Alcaraz, G.
Stern, C.
Corneillat, M.
Guichard, N.
Durlet, C.
Luquet, G.
Marin, F.
spellingShingle Ramos-Silva, P.
Kaandorp, J.
Herbst, F.
Plasseraud, L.
Alcaraz, G.
Stern, C.
Corneillat, M.
Guichard, N.
Durlet, C.
Luquet, G.
Marin, F.
The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization
author_facet Ramos-Silva, P.
Kaandorp, J.
Herbst, F.
Plasseraud, L.
Alcaraz, G.
Stern, C.
Corneillat, M.
Guichard, N.
Durlet, C.
Luquet, G.
Marin, F.
author_sort Ramos-Silva, P.
title The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization
title_short The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization
title_full The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization
title_fullStr The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization
title_full_unstemmed The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization
title_sort skeleton of the staghorn coral acropora millepora: molecular and structural characterization
publishDate 2014
url https://dare.uva.nl/personal/pure/en/publications/the-skeleton-of-the-staghorn-coral-acropora-millepora-molecular-and-structural-characterization(0291873f-dd90-4a04-8396-d06481fe0986).html
https://doi.org/10.1371/journal.pone.0097454
https://pure.uva.nl/ws/files/2343571/164752_439973.pdf
genre Ocean acidification
genre_facet Ocean acidification
op_source Ramos-Silva , P , Kaandorp , J , Herbst , F , Plasseraud , L , Alcaraz , G , Stern , C , Corneillat , M , Guichard , N , Durlet , C , Luquet , G & Marin , F 2014 , ' The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization ' , PLoS ONE , vol. 9 , no. 6 , e97454 . https://doi.org/10.1371/journal.pone.0097454
op_relation https://dare.uva.nl/personal/pure/en/publications/the-skeleton-of-the-staghorn-coral-acropora-millepora-molecular-and-structural-characterization(0291873f-dd90-4a04-8396-d06481fe0986).html
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