Characterization of a fatty acid-binding protein from the Pacific oyster (Crassostrea gigas): pharmaceutical and toxicological implications
Pharmaceuticals and their metabolites constitute a class of xenobiotics commonly found in aquatic environments which may cause toxic effects in aquatic organisms. Several different lipophilic molecules, including some pharmaceuticals, can bind to fatty acid-binding proteins (FABPs), a group of evolu...
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ftunivalgarve:oai:sapientia.ualg.pt:10400.1/15070 2023-05-15T15:58:12+02:00 Characterization of a fatty acid-binding protein from the Pacific oyster (Crassostrea gigas): pharmaceutical and toxicological implications Tisca, Juliana F. dos Santos, Karin Pessati, Tomás B. Zacchi, Flávia L. Soares, Fabíola S. Oliveira, Vanessa A. Bebianno, Maria João Bainy, Afonso C.D. Razzera, Guilherme 2021 http://hdl.handle.net/10400.1/15070 https://doi.org/10.1007/s11356-021-12645-y eng eng Springer info:eu-repo/grantAgreement/FCT/5876/147322/PT 0944-1344 http://hdl.handle.net/10400.1/15070 doi:10.1007/s11356-021-12645-y restrictedAccess Biomarker Homology modeling Lipid transporter Molecular docking Nonsteroidal drugs Ecotoxicology article 2021 ftunivalgarve https://doi.org/10.1007/s11356-021-12645-y 2022-05-30T08:49:29Z Pharmaceuticals and their metabolites constitute a class of xenobiotics commonly found in aquatic environments which may cause toxic effects in aquatic organisms. Several different lipophilic molecules, including some pharmaceuticals, can bind to fatty acid-binding proteins (FABPs), a group of evolutionarily related cytoplasmic proteins that belong to the intracellular lipid-binding protein (iLBP) family. An oyster FABP genome-wide investigation was not available until a recent study on gene organization, protein structure, and phylogeny of Crassostrea gigas iLBPs. Higher transcript levels of the C. gigas FABP2 gene were found after exposure to sewage and pharmaceuticals. Because of its relevance as a potential biomarker of aquatic contamination, in this study, recombinant FABP2 from C. gigas (CgFABP2) was successfully cloned, expressed, and purified, and in vitro and in silico assays were performed using lipids and pharmaceuticals. This is the first characterization of a protein from the iLBP family in C. gigas. Homology modeling and molecular docking were used to evaluate the binding affinities of natural ligands (palmitic, oleic, and arachidonic acids) and pharmaceuticals (ibuprofen, sodium diclofenac, and acetaminophen). Among the tested fatty acids, CgFABP2 showed preference for palmitic acid. The selected pharmaceuticals presented a biphasic-binding mode, suggesting a different binding affinity with a preference for diclofenac. Therefore, the approach using circular dichroism and in silico data might be useful for ligand-binding screening in an invertebrate model organism. info:eu-repo/semantics/publishedVersion Article in Journal/Newspaper Crassostrea gigas Pacific oyster Universidade do Algarve: Sapienta Pacific Environmental Science and Pollution Research 28 22 27811 27822 |
institution |
Open Polar |
collection |
Universidade do Algarve: Sapienta |
op_collection_id |
ftunivalgarve |
language |
English |
topic |
Biomarker Homology modeling Lipid transporter Molecular docking Nonsteroidal drugs Ecotoxicology |
spellingShingle |
Biomarker Homology modeling Lipid transporter Molecular docking Nonsteroidal drugs Ecotoxicology Tisca, Juliana F. dos Santos, Karin Pessati, Tomás B. Zacchi, Flávia L. Soares, Fabíola S. Oliveira, Vanessa A. Bebianno, Maria João Bainy, Afonso C.D. Razzera, Guilherme Characterization of a fatty acid-binding protein from the Pacific oyster (Crassostrea gigas): pharmaceutical and toxicological implications |
topic_facet |
Biomarker Homology modeling Lipid transporter Molecular docking Nonsteroidal drugs Ecotoxicology |
description |
Pharmaceuticals and their metabolites constitute a class of xenobiotics commonly found in aquatic environments which may cause toxic effects in aquatic organisms. Several different lipophilic molecules, including some pharmaceuticals, can bind to fatty acid-binding proteins (FABPs), a group of evolutionarily related cytoplasmic proteins that belong to the intracellular lipid-binding protein (iLBP) family. An oyster FABP genome-wide investigation was not available until a recent study on gene organization, protein structure, and phylogeny of Crassostrea gigas iLBPs. Higher transcript levels of the C. gigas FABP2 gene were found after exposure to sewage and pharmaceuticals. Because of its relevance as a potential biomarker of aquatic contamination, in this study, recombinant FABP2 from C. gigas (CgFABP2) was successfully cloned, expressed, and purified, and in vitro and in silico assays were performed using lipids and pharmaceuticals. This is the first characterization of a protein from the iLBP family in C. gigas. Homology modeling and molecular docking were used to evaluate the binding affinities of natural ligands (palmitic, oleic, and arachidonic acids) and pharmaceuticals (ibuprofen, sodium diclofenac, and acetaminophen). Among the tested fatty acids, CgFABP2 showed preference for palmitic acid. The selected pharmaceuticals presented a biphasic-binding mode, suggesting a different binding affinity with a preference for diclofenac. Therefore, the approach using circular dichroism and in silico data might be useful for ligand-binding screening in an invertebrate model organism. info:eu-repo/semantics/publishedVersion |
format |
Article in Journal/Newspaper |
author |
Tisca, Juliana F. dos Santos, Karin Pessati, Tomás B. Zacchi, Flávia L. Soares, Fabíola S. Oliveira, Vanessa A. Bebianno, Maria João Bainy, Afonso C.D. Razzera, Guilherme |
author_facet |
Tisca, Juliana F. dos Santos, Karin Pessati, Tomás B. Zacchi, Flávia L. Soares, Fabíola S. Oliveira, Vanessa A. Bebianno, Maria João Bainy, Afonso C.D. Razzera, Guilherme |
author_sort |
Tisca, Juliana F. |
title |
Characterization of a fatty acid-binding protein from the Pacific oyster (Crassostrea gigas): pharmaceutical and toxicological implications |
title_short |
Characterization of a fatty acid-binding protein from the Pacific oyster (Crassostrea gigas): pharmaceutical and toxicological implications |
title_full |
Characterization of a fatty acid-binding protein from the Pacific oyster (Crassostrea gigas): pharmaceutical and toxicological implications |
title_fullStr |
Characterization of a fatty acid-binding protein from the Pacific oyster (Crassostrea gigas): pharmaceutical and toxicological implications |
title_full_unstemmed |
Characterization of a fatty acid-binding protein from the Pacific oyster (Crassostrea gigas): pharmaceutical and toxicological implications |
title_sort |
characterization of a fatty acid-binding protein from the pacific oyster (crassostrea gigas): pharmaceutical and toxicological implications |
publisher |
Springer |
publishDate |
2021 |
url |
http://hdl.handle.net/10400.1/15070 https://doi.org/10.1007/s11356-021-12645-y |
geographic |
Pacific |
geographic_facet |
Pacific |
genre |
Crassostrea gigas Pacific oyster |
genre_facet |
Crassostrea gigas Pacific oyster |
op_relation |
info:eu-repo/grantAgreement/FCT/5876/147322/PT 0944-1344 http://hdl.handle.net/10400.1/15070 doi:10.1007/s11356-021-12645-y |
op_rights |
restrictedAccess |
op_doi |
https://doi.org/10.1007/s11356-021-12645-y |
container_title |
Environmental Science and Pollution Research |
container_volume |
28 |
container_issue |
22 |
container_start_page |
27811 |
op_container_end_page |
27822 |
_version_ |
1766393933967917056 |