Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach

An increasing number of studies are showing that Antarctic mega- and macrofauna are highly diverse, however, little is known about meiofaunal biodiversity in sediment communities, which are a vital part of a healthy and functional ecosystem. This is the first study to analyse community DNA (targetin...

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Published in:Scientific Reports
Main Authors: Fonseca, V. G., Sinniger, F., Gaspar, J. M., Quince, C., Creer, S., Power, Deborah M., Peck, Lloyd S., Clark, Melody S.
Format: Article in Journal/Newspaper
Language:English
Published: Nature Publishing Group 2018
Subjects:
Online Access:http://hdl.handle.net/10400.1/11607
https://doi.org/10.1038/s41598-017-06687-x
id ftunivalgarve:oai:sapientia.ualg.pt:10400.1/11607
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spelling ftunivalgarve:oai:sapientia.ualg.pt:10400.1/11607 2023-05-15T14:03:08+02:00 Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach Fonseca, V. G. Sinniger, F. Gaspar, J. M. Quince, C. Creer, S. Power, Deborah M. Peck, Lloyd S. Clark, Melody S. 2018-03 http://hdl.handle.net/10400.1/11607 https://doi.org/10.1038/s41598-017-06687-x eng eng Nature Publishing Group SFRH/BPD/80447/2014 info:eu-repo/grantAgreement/FCT/5876/147257/PT 2045-2322 http://hdl.handle.net/10400.1/11607 doi:10.1038/s41598-017-06687-x openAccess Feeding Ecology Peninsula Community Biodiversity Nematodes Patterns Shelf Vulnerability Variability Meiobenthos article 2018 ftunivalgarve https://doi.org/10.1038/s41598-017-06687-x 2022-05-30T08:48:21Z An increasing number of studies are showing that Antarctic mega- and macrofauna are highly diverse, however, little is known about meiofaunal biodiversity in sediment communities, which are a vital part of a healthy and functional ecosystem. This is the first study to analyse community DNA (targeting meiofauna) using metabarcoding to investigate biodiversity levels in sediment communities of the Antarctic Peninsula. The results show that almost all of the meiofaunal biodiversity in the benthic habitat has yet to be characterised, levels of biodiversity were higher than expected and similar to temperate regions, albeit with the existence of potentially new and locally adapted species never described before at the molecular level. The Rothera meiofaunal sample sites showed four dominant eukaryotic groups, the nematodes, arthropods, platyhelminthes, and the annelids; some of which could comprise species complexes. Comparisons with deep-sea data from the same region suggest little exchange of Operational Taxonomic Units (OTUs) between depths with the nematodes prevalent at all depths, but sharing the shallow water benthos with the copepods. This study provides a preliminary analysis of benthic Antarctic Peninsula meiofauna using high throughput sequencing which substantiates how little is known on the biodiversity of one of the most diverse, yet underexplored communities of the Antarctic: the benthos. NERC within the Polar Sciences for Planet Earth Programme; NERC Antarctic Funding Initiative Collaborative Gearing Scheme [57]; CCMAR from the Portuguese Science Foundation [FCT.UID/Multi/04326/2013]; Portuguese Foundation for Science and Technology (FCT) [SFRH/BPD/80447/2014]; European Community Marie Curie International Incoming Fellowship project MARMEDIV [253251] Article in Journal/Newspaper Antarc* Antarctic Antarctic Peninsula Copepods Universidade do Algarve: Sapienta Antarctic Antarctic Peninsula Rothera ENVELOPE(-68.130,-68.130,-67.568,-67.568) The Antarctic Scientific Reports 7 1
institution Open Polar
collection Universidade do Algarve: Sapienta
op_collection_id ftunivalgarve
language English
topic Feeding Ecology
Peninsula
Community
Biodiversity
Nematodes
Patterns
Shelf
Vulnerability
Variability
Meiobenthos
spellingShingle Feeding Ecology
Peninsula
Community
Biodiversity
Nematodes
Patterns
Shelf
Vulnerability
Variability
Meiobenthos
Fonseca, V. G.
Sinniger, F.
Gaspar, J. M.
Quince, C.
Creer, S.
Power, Deborah M.
Peck, Lloyd S.
Clark, Melody S.
Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
topic_facet Feeding Ecology
Peninsula
Community
Biodiversity
Nematodes
Patterns
Shelf
Vulnerability
Variability
Meiobenthos
description An increasing number of studies are showing that Antarctic mega- and macrofauna are highly diverse, however, little is known about meiofaunal biodiversity in sediment communities, which are a vital part of a healthy and functional ecosystem. This is the first study to analyse community DNA (targeting meiofauna) using metabarcoding to investigate biodiversity levels in sediment communities of the Antarctic Peninsula. The results show that almost all of the meiofaunal biodiversity in the benthic habitat has yet to be characterised, levels of biodiversity were higher than expected and similar to temperate regions, albeit with the existence of potentially new and locally adapted species never described before at the molecular level. The Rothera meiofaunal sample sites showed four dominant eukaryotic groups, the nematodes, arthropods, platyhelminthes, and the annelids; some of which could comprise species complexes. Comparisons with deep-sea data from the same region suggest little exchange of Operational Taxonomic Units (OTUs) between depths with the nematodes prevalent at all depths, but sharing the shallow water benthos with the copepods. This study provides a preliminary analysis of benthic Antarctic Peninsula meiofauna using high throughput sequencing which substantiates how little is known on the biodiversity of one of the most diverse, yet underexplored communities of the Antarctic: the benthos. NERC within the Polar Sciences for Planet Earth Programme; NERC Antarctic Funding Initiative Collaborative Gearing Scheme [57]; CCMAR from the Portuguese Science Foundation [FCT.UID/Multi/04326/2013]; Portuguese Foundation for Science and Technology (FCT) [SFRH/BPD/80447/2014]; European Community Marie Curie International Incoming Fellowship project MARMEDIV [253251]
format Article in Journal/Newspaper
author Fonseca, V. G.
Sinniger, F.
Gaspar, J. M.
Quince, C.
Creer, S.
Power, Deborah M.
Peck, Lloyd S.
Clark, Melody S.
author_facet Fonseca, V. G.
Sinniger, F.
Gaspar, J. M.
Quince, C.
Creer, S.
Power, Deborah M.
Peck, Lloyd S.
Clark, Melody S.
author_sort Fonseca, V. G.
title Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
title_short Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
title_full Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
title_fullStr Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
title_full_unstemmed Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
title_sort revealing higher than expected meiofaunal diversity in antarctic sediments: a metabarcoding approach
publisher Nature Publishing Group
publishDate 2018
url http://hdl.handle.net/10400.1/11607
https://doi.org/10.1038/s41598-017-06687-x
long_lat ENVELOPE(-68.130,-68.130,-67.568,-67.568)
geographic Antarctic
Antarctic Peninsula
Rothera
The Antarctic
geographic_facet Antarctic
Antarctic Peninsula
Rothera
The Antarctic
genre Antarc*
Antarctic
Antarctic Peninsula
Copepods
genre_facet Antarc*
Antarctic
Antarctic Peninsula
Copepods
op_relation SFRH/BPD/80447/2014
info:eu-repo/grantAgreement/FCT/5876/147257/PT
2045-2322
http://hdl.handle.net/10400.1/11607
doi:10.1038/s41598-017-06687-x
op_rights openAccess
op_doi https://doi.org/10.1038/s41598-017-06687-x
container_title Scientific Reports
container_volume 7
container_issue 1
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