Transcriptomic response to ISAV infection in the gills, head kidney and spleen of resistant and susceptible Atlantic salmon

Acknowledgements We thank the Oxford Genomics Centre at the Wellcome Centre for Human Genetics (funded by Wellcome Trust grant reference 203141/Z/16/Z) for the generation and initial processing of sequencing data. Funding The authors gratefully acknowledge funding from BBSRC (BB/R008612/1, BB/R00897...

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Published in:BMC Genomics
Main Authors: Gervais, Ophélie, Papadopoulou, Athina, Gratacap, Remi, Hillestad, Borghild, Tinch, Alan E, Martin, Samuel A M, Houston, Ross D, Robledo, Diego
Other Authors: University of Aberdeen.Biological Sciences
Format: Article in Journal/Newspaper
Language:English
Published: 2022
Subjects:
Online Access:https://hdl.handle.net/2164/20535
https://doi.org/10.1186/s12864-022-09007-4
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spelling ftunivaberdeen:oai:aura.abdn.ac.uk:2164/20535 2024-04-28T08:13:33+00:00 Transcriptomic response to ISAV infection in the gills, head kidney and spleen of resistant and susceptible Atlantic salmon Gervais, Ophélie Papadopoulou, Athina Gratacap, Remi Hillestad, Borghild Tinch, Alan E Martin, Samuel A M Houston, Ross D Robledo, Diego University of Aberdeen.Biological Sciences 2022-11-28 13 2665619 application/pdf https://hdl.handle.net/2164/20535 https://doi.org/10.1186/s12864-022-09007-4 eng eng BMC Genomics 222868802 542f6f8f-2438-43f5-88b6-de48299d13b5 36443659 85142887479 Gervais , O , Papadopoulou , A , Gratacap , R , Hillestad , B , Tinch , A E , Martin , S A M , Houston , R D & Robledo , D 2022 , ' Transcriptomic response to ISAV infection in the gills, head kidney and spleen of resistant and susceptible Atlantic salmon ' , BMC Genomics , vol. 23 , 775 . https://doi.org/10.1186/s12864-022-09007-4 1471-2164 ORCID: /0000-0003-0289-6317/work/154626923 https://hdl.handle.net/2164/20535 doi:10.1186/s12864-022-09007-4 SDG 3 - Good Health and Well-being Salmo Salar RNA-seq Aquaculture Fish ISAV Disease resistance QH301 Biology Wellcome Trust 203141/Z/16/Z Biotechnology and Biological Sciences Research Council (BBSRC) BB/R008612/1 BB/R008973/1 BB/P013759/1 BB/P013740/1 Supplementary Information Supplementary Data QH301 Journal article 2022 ftunivaberdeen https://doi.org/10.1186/s12864-022-09007-4 2024-04-03T14:13:03Z Acknowledgements We thank the Oxford Genomics Centre at the Wellcome Centre for Human Genetics (funded by Wellcome Trust grant reference 203141/Z/16/Z) for the generation and initial processing of sequencing data. Funding The authors gratefully acknowledge funding from BBSRC (BB/R008612/1, BB/R008973/1), in addition to BBSRC Institute Strategic Programme Grants to the Roslin Institute (BB/P013759/1 and BB/P013740/1). Peer reviewed Article in Journal/Newspaper Atlantic salmon Salmo salar Aberdeen University Research Archive (AURA) BMC Genomics 23 1
institution Open Polar
collection Aberdeen University Research Archive (AURA)
op_collection_id ftunivaberdeen
language English
topic SDG 3 - Good Health and Well-being
Salmo Salar
RNA-seq
Aquaculture
Fish
ISAV
Disease resistance
QH301 Biology
Wellcome Trust
203141/Z/16/Z
Biotechnology and Biological Sciences Research Council (BBSRC)
BB/R008612/1
BB/R008973/1
BB/P013759/1
BB/P013740/1
Supplementary Information
Supplementary Data
QH301
spellingShingle SDG 3 - Good Health and Well-being
Salmo Salar
RNA-seq
Aquaculture
Fish
ISAV
Disease resistance
QH301 Biology
Wellcome Trust
203141/Z/16/Z
Biotechnology and Biological Sciences Research Council (BBSRC)
BB/R008612/1
BB/R008973/1
BB/P013759/1
BB/P013740/1
Supplementary Information
Supplementary Data
QH301
Gervais, Ophélie
Papadopoulou, Athina
Gratacap, Remi
Hillestad, Borghild
Tinch, Alan E
Martin, Samuel A M
Houston, Ross D
Robledo, Diego
Transcriptomic response to ISAV infection in the gills, head kidney and spleen of resistant and susceptible Atlantic salmon
topic_facet SDG 3 - Good Health and Well-being
Salmo Salar
RNA-seq
Aquaculture
Fish
ISAV
Disease resistance
QH301 Biology
Wellcome Trust
203141/Z/16/Z
Biotechnology and Biological Sciences Research Council (BBSRC)
BB/R008612/1
BB/R008973/1
BB/P013759/1
BB/P013740/1
Supplementary Information
Supplementary Data
QH301
description Acknowledgements We thank the Oxford Genomics Centre at the Wellcome Centre for Human Genetics (funded by Wellcome Trust grant reference 203141/Z/16/Z) for the generation and initial processing of sequencing data. Funding The authors gratefully acknowledge funding from BBSRC (BB/R008612/1, BB/R008973/1), in addition to BBSRC Institute Strategic Programme Grants to the Roslin Institute (BB/P013759/1 and BB/P013740/1). Peer reviewed
author2 University of Aberdeen.Biological Sciences
format Article in Journal/Newspaper
author Gervais, Ophélie
Papadopoulou, Athina
Gratacap, Remi
Hillestad, Borghild
Tinch, Alan E
Martin, Samuel A M
Houston, Ross D
Robledo, Diego
author_facet Gervais, Ophélie
Papadopoulou, Athina
Gratacap, Remi
Hillestad, Borghild
Tinch, Alan E
Martin, Samuel A M
Houston, Ross D
Robledo, Diego
author_sort Gervais, Ophélie
title Transcriptomic response to ISAV infection in the gills, head kidney and spleen of resistant and susceptible Atlantic salmon
title_short Transcriptomic response to ISAV infection in the gills, head kidney and spleen of resistant and susceptible Atlantic salmon
title_full Transcriptomic response to ISAV infection in the gills, head kidney and spleen of resistant and susceptible Atlantic salmon
title_fullStr Transcriptomic response to ISAV infection in the gills, head kidney and spleen of resistant and susceptible Atlantic salmon
title_full_unstemmed Transcriptomic response to ISAV infection in the gills, head kidney and spleen of resistant and susceptible Atlantic salmon
title_sort transcriptomic response to isav infection in the gills, head kidney and spleen of resistant and susceptible atlantic salmon
publishDate 2022
url https://hdl.handle.net/2164/20535
https://doi.org/10.1186/s12864-022-09007-4
genre Atlantic salmon
Salmo salar
genre_facet Atlantic salmon
Salmo salar
op_relation BMC Genomics
222868802
542f6f8f-2438-43f5-88b6-de48299d13b5
36443659
85142887479
Gervais , O , Papadopoulou , A , Gratacap , R , Hillestad , B , Tinch , A E , Martin , S A M , Houston , R D & Robledo , D 2022 , ' Transcriptomic response to ISAV infection in the gills, head kidney and spleen of resistant and susceptible Atlantic salmon ' , BMC Genomics , vol. 23 , 775 . https://doi.org/10.1186/s12864-022-09007-4
1471-2164
ORCID: /0000-0003-0289-6317/work/154626923
https://hdl.handle.net/2164/20535
doi:10.1186/s12864-022-09007-4
op_doi https://doi.org/10.1186/s12864-022-09007-4
container_title BMC Genomics
container_volume 23
container_issue 1
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