Whole genome sequencing of four bacterial strains from South Shetland Trench revealing biosynthetic and environmental adaptation gene clusters

L.H.A. thanks the Deanship of Scientific Research at Princess Nourah bint Abdulrahman University for funding this work through the Fast-track Research Funding Program. The authors thank the Captain, crew and scientific party of the 2015-16 ‘PharmaDeep’ cruise on the Spanish Antarctic vessel BIO Hesp...

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Published in:Marine Genomics
Main Authors: Abdel-Mageed, Wael M, Lehri, Burhan, Jarmusch, Scott A, Miranda, Kevin, Al-Wahaibi, Lamya H, Stewart, Heather A, Jamieson, Alan J, Jaspars, Marcel, Karlyshev, Andrey V
Other Authors: University of Aberdeen.The Marine Biodiscovery Centre, University of Aberdeen.Chemistry
Format: Article in Journal/Newspaper
Language:English
Published: 2020
Subjects:
QD
Online Access:https://hdl.handle.net/2164/16889
https://doi.org/10.1016/j.margen.2020.100782
http://www.scopus.com/inward/record.url?scp=85085091692&partnerID=8YFLogxK
id ftunivaberdeen:oai:aura.abdn.ac.uk:2164/16889
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spelling ftunivaberdeen:oai:aura.abdn.ac.uk:2164/16889 2024-04-28T07:58:44+00:00 Whole genome sequencing of four bacterial strains from South Shetland Trench revealing biosynthetic and environmental adaptation gene clusters Abdel-Mageed, Wael M Lehri, Burhan Jarmusch, Scott A Miranda, Kevin Al-Wahaibi, Lamya H Stewart, Heather A Jamieson, Alan J Jaspars, Marcel Karlyshev, Andrey V University of Aberdeen.The Marine Biodiscovery Centre University of Aberdeen.Chemistry 2020-12 11 1619996 application/pdf https://hdl.handle.net/2164/16889 https://doi.org/10.1016/j.margen.2020.100782 http://www.scopus.com/inward/record.url?scp=85085091692&partnerID=8YFLogxK eng eng Marine Genomics 170669971 08686b14-e20e-42d7-8afb-22e72b4d7ba0 32387528 85085091692 000593931800004 Abdel-Mageed , W M , Lehri , B , Jarmusch , S A , Miranda , K , Al-Wahaibi , L H , Stewart , H A , Jamieson , A J , Jaspars , M & Karlyshev , A V 2020 , ' Whole genome sequencing of four bacterial strains from South Shetland Trench revealing biosynthetic and environmental adaptation gene clusters ' , Marine Genomics , vol. 54 , 100782 . https://doi.org/10.1016/j.margen.2020.100782 1874-7787 https://hdl.handle.net/2164/16889 doi:10.1016/j.margen.2020.100782 http://www.scopus.com/inward/record.url?scp=85085091692&partnerID=8YFLogxK SDG 14 - Life Below Water South Shetland Trench Dietzia sp Pseudomonas sp Halomonas sp Genome sequencing biosynthetic gene clusters Antimicrobials QD Chemistry Genetics Aquatic Science European Commission 312762 Supplementary Data QD Journal article 2020 ftunivaberdeen https://doi.org/10.1016/j.margen.2020.100782 2024-04-03T14:27:25Z L.H.A. thanks the Deanship of Scientific Research at Princess Nourah bint Abdulrahman University for funding this work through the Fast-track Research Funding Program. The authors thank the Captain, crew and scientific party of the 2015-16 ‘PharmaDeep’ cruise on the Spanish Antarctic vessel BIO Hesperides. The cruise activity was supported by the European Union Research Infrastructures project ´EuroFleets 2´ under the 7th Framework Programme of the European Commission (agreement no. 312762). A.J.J. was the awardee of PharmaDeep: New Pharmaceuticals from the deep Antarctic. The authors also would like to thank John Still at ACEMAC for SEM images and the assay providers at Medina for their contribution. Peer reviewed Article in Journal/Newspaper Antarc* Antarctic Aberdeen University Research Archive (AURA) Marine Genomics 54 100782
institution Open Polar
collection Aberdeen University Research Archive (AURA)
op_collection_id ftunivaberdeen
language English
topic SDG 14 - Life Below Water
South Shetland Trench
Dietzia sp
Pseudomonas sp
Halomonas sp
Genome sequencing
biosynthetic gene clusters
Antimicrobials
QD Chemistry
Genetics
Aquatic Science
European Commission
312762
Supplementary Data
QD
spellingShingle SDG 14 - Life Below Water
South Shetland Trench
Dietzia sp
Pseudomonas sp
Halomonas sp
Genome sequencing
biosynthetic gene clusters
Antimicrobials
QD Chemistry
Genetics
Aquatic Science
European Commission
312762
Supplementary Data
QD
Abdel-Mageed, Wael M
Lehri, Burhan
Jarmusch, Scott A
Miranda, Kevin
Al-Wahaibi, Lamya H
Stewart, Heather A
Jamieson, Alan J
Jaspars, Marcel
Karlyshev, Andrey V
Whole genome sequencing of four bacterial strains from South Shetland Trench revealing biosynthetic and environmental adaptation gene clusters
topic_facet SDG 14 - Life Below Water
South Shetland Trench
Dietzia sp
Pseudomonas sp
Halomonas sp
Genome sequencing
biosynthetic gene clusters
Antimicrobials
QD Chemistry
Genetics
Aquatic Science
European Commission
312762
Supplementary Data
QD
description L.H.A. thanks the Deanship of Scientific Research at Princess Nourah bint Abdulrahman University for funding this work through the Fast-track Research Funding Program. The authors thank the Captain, crew and scientific party of the 2015-16 ‘PharmaDeep’ cruise on the Spanish Antarctic vessel BIO Hesperides. The cruise activity was supported by the European Union Research Infrastructures project ´EuroFleets 2´ under the 7th Framework Programme of the European Commission (agreement no. 312762). A.J.J. was the awardee of PharmaDeep: New Pharmaceuticals from the deep Antarctic. The authors also would like to thank John Still at ACEMAC for SEM images and the assay providers at Medina for their contribution. Peer reviewed
author2 University of Aberdeen.The Marine Biodiscovery Centre
University of Aberdeen.Chemistry
format Article in Journal/Newspaper
author Abdel-Mageed, Wael M
Lehri, Burhan
Jarmusch, Scott A
Miranda, Kevin
Al-Wahaibi, Lamya H
Stewart, Heather A
Jamieson, Alan J
Jaspars, Marcel
Karlyshev, Andrey V
author_facet Abdel-Mageed, Wael M
Lehri, Burhan
Jarmusch, Scott A
Miranda, Kevin
Al-Wahaibi, Lamya H
Stewart, Heather A
Jamieson, Alan J
Jaspars, Marcel
Karlyshev, Andrey V
author_sort Abdel-Mageed, Wael M
title Whole genome sequencing of four bacterial strains from South Shetland Trench revealing biosynthetic and environmental adaptation gene clusters
title_short Whole genome sequencing of four bacterial strains from South Shetland Trench revealing biosynthetic and environmental adaptation gene clusters
title_full Whole genome sequencing of four bacterial strains from South Shetland Trench revealing biosynthetic and environmental adaptation gene clusters
title_fullStr Whole genome sequencing of four bacterial strains from South Shetland Trench revealing biosynthetic and environmental adaptation gene clusters
title_full_unstemmed Whole genome sequencing of four bacterial strains from South Shetland Trench revealing biosynthetic and environmental adaptation gene clusters
title_sort whole genome sequencing of four bacterial strains from south shetland trench revealing biosynthetic and environmental adaptation gene clusters
publishDate 2020
url https://hdl.handle.net/2164/16889
https://doi.org/10.1016/j.margen.2020.100782
http://www.scopus.com/inward/record.url?scp=85085091692&partnerID=8YFLogxK
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_relation Marine Genomics
170669971
08686b14-e20e-42d7-8afb-22e72b4d7ba0
32387528
85085091692
000593931800004
Abdel-Mageed , W M , Lehri , B , Jarmusch , S A , Miranda , K , Al-Wahaibi , L H , Stewart , H A , Jamieson , A J , Jaspars , M & Karlyshev , A V 2020 , ' Whole genome sequencing of four bacterial strains from South Shetland Trench revealing biosynthetic and environmental adaptation gene clusters ' , Marine Genomics , vol. 54 , 100782 . https://doi.org/10.1016/j.margen.2020.100782
1874-7787
https://hdl.handle.net/2164/16889
doi:10.1016/j.margen.2020.100782
http://www.scopus.com/inward/record.url?scp=85085091692&partnerID=8YFLogxK
op_doi https://doi.org/10.1016/j.margen.2020.100782
container_title Marine Genomics
container_volume 54
container_start_page 100782
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