Isolation and characterization of a novel violacein-like pigment producing psychrotrophic bacterial species Janthinobacterium svalbardensis sp. nov

A bacterial strain designated JA-1, related to Janthinobacterium lividum, was isolated from glacier ice samples from the island Spitsbergen in the Arctic. The strain was tested for phenotypic traits and the most prominent appeared to be the dark red brown to black pigmentation different from the vio...

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Published in:Antonie van Leeuwenhoek
Main Authors: Ambrožič, Jerneja, Žgur-Bertok, Darja, Kostanjšek, Rok, Avguštin, Gorazd
Format: Other/Unknown Material
Language:English
Published: Kluwer Academic Publishers 2015
Subjects:
Online Access:https://repozitorij.uni-lj.si/IzpisGradiva.php?id=36579
https://repozitorij.uni-lj.si/Dokument.php?id=36590&dn=
https://plus.si.cobiss.net/opac7/bib/3147912?lang=sl
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spelling ftuniljubljanair:oai:repozitorij.uni-lj.si:IzpisGradiva.php-id-36579 2023-05-15T15:05:06+02:00 Isolation and characterization of a novel violacein-like pigment producing psychrotrophic bacterial species Janthinobacterium svalbardensis sp. nov Ambrožič, Jerneja Žgur-Bertok, Darja Kostanjšek, Rok Avguštin, Gorazd 2015-07-10 text/url https://repozitorij.uni-lj.si/IzpisGradiva.php?id=36579 https://repozitorij.uni-lj.si/Dokument.php?id=36590&dn= https://plus.si.cobiss.net/opac7/bib/3147912?lang=sl eng eng Kluwer Academic Publishers info:eu-repo/semantics/altIdentifier/doi/10.1007/s10482-012-9858-0 https://repozitorij.uni-lj.si/IzpisGradiva.php?id=36579 https://repozitorij.uni-lj.si/Dokument.php?id=36590&dn= https://plus.si.cobiss.net/opac7/bib/3147912?lang=sl info:eu-repo/semantics/openAccess Antonie van Leeuwenhoek, vol. ue 4, no. 103, pp. 763-769, 2013. ISSN: 0003-6072 mikrobiologija bakterije psihrotrofne bakterije Janthinobacterium svalbardensis pigmenti info:eu-repo/classification/udc/579 info:eu-repo/semantics/other info:eu-repo/semantics/publishedVersion 2015 ftuniljubljanair https://doi.org/10.1007/s10482-012-9858-0 2021-12-06T09:25:07Z A bacterial strain designated JA-1, related to Janthinobacterium lividum, was isolated from glacier ice samples from the island Spitsbergen in the Arctic. The strain was tested for phenotypic traits and the most prominent appeared to be the dark red brown to black pigmentation different from the violet pigment of Janthinobacterium, Chromobacterium and Iodobacter. Phylogenetic analysis based on 16S rRNA gene sequences and DNA-DNA hybridization tests showed that strain JA-1 belongs to the genus Janthinobacterium but represents a novel lineage distinct from the two known species of this genus, J. lividum and Janthinobacterium agaricidamnosum. TheDNAG + C content of strain JA-1 was determined to be 62.3 mol %. The isolate is a psychrotrophic Gram negative bacterium, rod-shaped with rounded ends, containing intracellular inclusions and one polar flagellum. On the basis of the presented results strain JA-1 is proposed as the type strain of a novel species of the genus Janthinobacterium, for which the name Janthinobacterium svalbardensis sp. nov. is proposed (JA-1T = DSM25734,ZIM B637). Other/Unknown Material Arctic Spitsbergen Repository of the University of Ljubljana (RUL) Arctic Antonie van Leeuwenhoek 103 4 763 769
institution Open Polar
collection Repository of the University of Ljubljana (RUL)
op_collection_id ftuniljubljanair
language English
topic mikrobiologija
bakterije
psihrotrofne bakterije
Janthinobacterium svalbardensis
pigmenti
info:eu-repo/classification/udc/579
spellingShingle mikrobiologija
bakterije
psihrotrofne bakterije
Janthinobacterium svalbardensis
pigmenti
info:eu-repo/classification/udc/579
Ambrožič, Jerneja
Žgur-Bertok, Darja
Kostanjšek, Rok
Avguštin, Gorazd
Isolation and characterization of a novel violacein-like pigment producing psychrotrophic bacterial species Janthinobacterium svalbardensis sp. nov
topic_facet mikrobiologija
bakterije
psihrotrofne bakterije
Janthinobacterium svalbardensis
pigmenti
info:eu-repo/classification/udc/579
description A bacterial strain designated JA-1, related to Janthinobacterium lividum, was isolated from glacier ice samples from the island Spitsbergen in the Arctic. The strain was tested for phenotypic traits and the most prominent appeared to be the dark red brown to black pigmentation different from the violet pigment of Janthinobacterium, Chromobacterium and Iodobacter. Phylogenetic analysis based on 16S rRNA gene sequences and DNA-DNA hybridization tests showed that strain JA-1 belongs to the genus Janthinobacterium but represents a novel lineage distinct from the two known species of this genus, J. lividum and Janthinobacterium agaricidamnosum. TheDNAG + C content of strain JA-1 was determined to be 62.3 mol %. The isolate is a psychrotrophic Gram negative bacterium, rod-shaped with rounded ends, containing intracellular inclusions and one polar flagellum. On the basis of the presented results strain JA-1 is proposed as the type strain of a novel species of the genus Janthinobacterium, for which the name Janthinobacterium svalbardensis sp. nov. is proposed (JA-1T = DSM25734,ZIM B637).
format Other/Unknown Material
author Ambrožič, Jerneja
Žgur-Bertok, Darja
Kostanjšek, Rok
Avguštin, Gorazd
author_facet Ambrožič, Jerneja
Žgur-Bertok, Darja
Kostanjšek, Rok
Avguštin, Gorazd
author_sort Ambrožič, Jerneja
title Isolation and characterization of a novel violacein-like pigment producing psychrotrophic bacterial species Janthinobacterium svalbardensis sp. nov
title_short Isolation and characterization of a novel violacein-like pigment producing psychrotrophic bacterial species Janthinobacterium svalbardensis sp. nov
title_full Isolation and characterization of a novel violacein-like pigment producing psychrotrophic bacterial species Janthinobacterium svalbardensis sp. nov
title_fullStr Isolation and characterization of a novel violacein-like pigment producing psychrotrophic bacterial species Janthinobacterium svalbardensis sp. nov
title_full_unstemmed Isolation and characterization of a novel violacein-like pigment producing psychrotrophic bacterial species Janthinobacterium svalbardensis sp. nov
title_sort isolation and characterization of a novel violacein-like pigment producing psychrotrophic bacterial species janthinobacterium svalbardensis sp. nov
publisher Kluwer Academic Publishers
publishDate 2015
url https://repozitorij.uni-lj.si/IzpisGradiva.php?id=36579
https://repozitorij.uni-lj.si/Dokument.php?id=36590&dn=
https://plus.si.cobiss.net/opac7/bib/3147912?lang=sl
geographic Arctic
geographic_facet Arctic
genre Arctic
Spitsbergen
genre_facet Arctic
Spitsbergen
op_source Antonie van Leeuwenhoek, vol. ue 4, no. 103, pp. 763-769, 2013.
ISSN: 0003-6072
op_relation info:eu-repo/semantics/altIdentifier/doi/10.1007/s10482-012-9858-0
https://repozitorij.uni-lj.si/IzpisGradiva.php?id=36579
https://repozitorij.uni-lj.si/Dokument.php?id=36590&dn=
https://plus.si.cobiss.net/opac7/bib/3147912?lang=sl
op_rights info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1007/s10482-012-9858-0
container_title Antonie van Leeuwenhoek
container_volume 103
container_issue 4
container_start_page 763
op_container_end_page 769
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