Recent speciation and hybridization in Icelandic deep-sea isopods:An integrative approach using genomics and proteomics
The crustacean marine isopod species Haploniscus bicuspis (Sars, 1877) shows circum-Icelandic distribution in a wide range of environmental conditions and along well-known geographic barriers, such as the Greenland-Iceland-Faroe (GIF) Ridge. We wanted to explore population genetics, phylogeography a...
Published in: | Molecular Ecology |
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Language: | English |
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2022
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Online Access: | https://hdl.handle.net/11370/ee138b52-d85e-446f-965e-c2465a639eff https://research.rug.nl/en/publications/ee138b52-d85e-446f-965e-c2465a639eff https://doi.org/10.1111/mec.16234 https://pure.rug.nl/ws/files/634332146/Molecular_Ecology_2021_Paulus_Recent_speciation_and_hybridization_in_Icelandic_deep_sea_isopods_An_integrative.pdf http://www.scopus.com/inward/record.url?scp=85118499034&partnerID=8YFLogxK |
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ftunigroningenpu:oai:pure.rug.nl:publications/ee138b52-d85e-446f-965e-c2465a639eff 2024-06-23T07:53:23+00:00 Recent speciation and hybridization in Icelandic deep-sea isopods:An integrative approach using genomics and proteomics Paulus, Eva Brix, Saskia Siebert, Annabelle Martínez Arbizu, Pedro Rossel, Sven Peters, Janna Svavarsson, Jörundur Schwentner, Martin 2022-01 application/pdf https://hdl.handle.net/11370/ee138b52-d85e-446f-965e-c2465a639eff https://research.rug.nl/en/publications/ee138b52-d85e-446f-965e-c2465a639eff https://doi.org/10.1111/mec.16234 https://pure.rug.nl/ws/files/634332146/Molecular_Ecology_2021_Paulus_Recent_speciation_and_hybridization_in_Icelandic_deep_sea_isopods_An_integrative.pdf http://www.scopus.com/inward/record.url?scp=85118499034&partnerID=8YFLogxK eng eng https://research.rug.nl/en/publications/ee138b52-d85e-446f-965e-c2465a639eff info:eu-repo/semantics/openAccess Paulus , E , Brix , S , Siebert , A , Martínez Arbizu , P , Rossel , S , Peters , J , Svavarsson , J & Schwentner , M 2022 , ' Recent speciation and hybridization in Icelandic deep-sea isopods : An integrative approach using genomics and proteomics ' , Molecular Ecology , vol. 31 , no. 1 , pp. 313-330 . https://doi.org/10.1111/mec.16234 article 2022 ftunigroningenpu https://doi.org/10.1111/mec.16234 2024-06-10T17:40:14Z The crustacean marine isopod species Haploniscus bicuspis (Sars, 1877) shows circum-Icelandic distribution in a wide range of environmental conditions and along well-known geographic barriers, such as the Greenland-Iceland-Faroe (GIF) Ridge. We wanted to explore population genetics, phylogeography and cryptic speciation as well as investigate whether previously described, but unaccepted subspecies have any merit. Using the same set of specimens, we combined mitochondrial COI sequences, thousands of nuclear loci (ddRAD), and proteomic profiles, plus selected morphological characters using confocal laser scanning microscopy (CLSM). Five divergent genetic lineages were identified by COI and ddRAD, two south and three north of the GIF Ridge. Assignment of populations to the three northern lineages varied and detailed analyses revealed hybridization and gene flow between them, suggesting a single northern species with a complex phylogeographic history. No apparent hybridization was observed among lineages south of the GIF Ridge, inferring the existence of two more species. Differences in proteomic profiles between the three putative species were minimal, implying an ongoing or recent speciation process. Population differentiation was high, even among closely associated populations, and higher in mitochondrial COI than nuclear ddRAD loci. Gene flow is apparently male-biased, leading to hybrid zones and instances of complete exchange of the local nuclear genome through immigrating males. This study did not confirm the existence of subspecies defined by male characters, which probably instead refer to different male developmental stages. Article in Journal/Newspaper Greenland Iceland University of Groningen research database Greenland Molecular Ecology 31 1 313 330 |
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University of Groningen research database |
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ftunigroningenpu |
language |
English |
description |
The crustacean marine isopod species Haploniscus bicuspis (Sars, 1877) shows circum-Icelandic distribution in a wide range of environmental conditions and along well-known geographic barriers, such as the Greenland-Iceland-Faroe (GIF) Ridge. We wanted to explore population genetics, phylogeography and cryptic speciation as well as investigate whether previously described, but unaccepted subspecies have any merit. Using the same set of specimens, we combined mitochondrial COI sequences, thousands of nuclear loci (ddRAD), and proteomic profiles, plus selected morphological characters using confocal laser scanning microscopy (CLSM). Five divergent genetic lineages were identified by COI and ddRAD, two south and three north of the GIF Ridge. Assignment of populations to the three northern lineages varied and detailed analyses revealed hybridization and gene flow between them, suggesting a single northern species with a complex phylogeographic history. No apparent hybridization was observed among lineages south of the GIF Ridge, inferring the existence of two more species. Differences in proteomic profiles between the three putative species were minimal, implying an ongoing or recent speciation process. Population differentiation was high, even among closely associated populations, and higher in mitochondrial COI than nuclear ddRAD loci. Gene flow is apparently male-biased, leading to hybrid zones and instances of complete exchange of the local nuclear genome through immigrating males. This study did not confirm the existence of subspecies defined by male characters, which probably instead refer to different male developmental stages. |
format |
Article in Journal/Newspaper |
author |
Paulus, Eva Brix, Saskia Siebert, Annabelle Martínez Arbizu, Pedro Rossel, Sven Peters, Janna Svavarsson, Jörundur Schwentner, Martin |
spellingShingle |
Paulus, Eva Brix, Saskia Siebert, Annabelle Martínez Arbizu, Pedro Rossel, Sven Peters, Janna Svavarsson, Jörundur Schwentner, Martin Recent speciation and hybridization in Icelandic deep-sea isopods:An integrative approach using genomics and proteomics |
author_facet |
Paulus, Eva Brix, Saskia Siebert, Annabelle Martínez Arbizu, Pedro Rossel, Sven Peters, Janna Svavarsson, Jörundur Schwentner, Martin |
author_sort |
Paulus, Eva |
title |
Recent speciation and hybridization in Icelandic deep-sea isopods:An integrative approach using genomics and proteomics |
title_short |
Recent speciation and hybridization in Icelandic deep-sea isopods:An integrative approach using genomics and proteomics |
title_full |
Recent speciation and hybridization in Icelandic deep-sea isopods:An integrative approach using genomics and proteomics |
title_fullStr |
Recent speciation and hybridization in Icelandic deep-sea isopods:An integrative approach using genomics and proteomics |
title_full_unstemmed |
Recent speciation and hybridization in Icelandic deep-sea isopods:An integrative approach using genomics and proteomics |
title_sort |
recent speciation and hybridization in icelandic deep-sea isopods:an integrative approach using genomics and proteomics |
publishDate |
2022 |
url |
https://hdl.handle.net/11370/ee138b52-d85e-446f-965e-c2465a639eff https://research.rug.nl/en/publications/ee138b52-d85e-446f-965e-c2465a639eff https://doi.org/10.1111/mec.16234 https://pure.rug.nl/ws/files/634332146/Molecular_Ecology_2021_Paulus_Recent_speciation_and_hybridization_in_Icelandic_deep_sea_isopods_An_integrative.pdf http://www.scopus.com/inward/record.url?scp=85118499034&partnerID=8YFLogxK |
geographic |
Greenland |
geographic_facet |
Greenland |
genre |
Greenland Iceland |
genre_facet |
Greenland Iceland |
op_source |
Paulus , E , Brix , S , Siebert , A , Martínez Arbizu , P , Rossel , S , Peters , J , Svavarsson , J & Schwentner , M 2022 , ' Recent speciation and hybridization in Icelandic deep-sea isopods : An integrative approach using genomics and proteomics ' , Molecular Ecology , vol. 31 , no. 1 , pp. 313-330 . https://doi.org/10.1111/mec.16234 |
op_relation |
https://research.rug.nl/en/publications/ee138b52-d85e-446f-965e-c2465a639eff |
op_rights |
info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1111/mec.16234 |
container_title |
Molecular Ecology |
container_volume |
31 |
container_issue |
1 |
container_start_page |
313 |
op_container_end_page |
330 |
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1802644983957684224 |