Direct estimation of genome mutation rates from pedigrees in free-ranging baleen whales
Current low germline mutation rate () estimates in baleen whales have greatly influenced research ranging from assessments of whaling impacts to evolutionary cancer biology. However, the reported rates were subject to methodological errors and uncertainty. We estimated directly from pedigrees in nat...
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BioRxiv
2022
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Online Access: | https://hdl.handle.net/11370/36c28fe3-b17c-4e8c-8994-7779e225c8e3 https://research.rug.nl/en/publications/36c28fe3-b17c-4e8c-8994-7779e225c8e3 https://doi.org/10.1101/2022.10.06.510775 https://pure.rug.nl/ws/files/646983911/2022.10.06.510775v1.full.pdf |
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ftunigroningenpu:oai:pure.rug.nl:publications/36c28fe3-b17c-4e8c-8994-7779e225c8e3 2024-06-23T07:51:34+00:00 Direct estimation of genome mutation rates from pedigrees in free-ranging baleen whales Suárez-Menéndez, Marcos Bérubé, Martine Furni, Fabrício Rivera-León, Vania E. Heide-Jørgensen, Mads-Peter Larsen, Finn Sears, Richard Ramp, Christian Eriksson, Britas Klemens Etienne, Rampal S. Robbins, Jooke Palsbøll, Per J. 2022-10-07 application/pdf https://hdl.handle.net/11370/36c28fe3-b17c-4e8c-8994-7779e225c8e3 https://research.rug.nl/en/publications/36c28fe3-b17c-4e8c-8994-7779e225c8e3 https://doi.org/10.1101/2022.10.06.510775 https://pure.rug.nl/ws/files/646983911/2022.10.06.510775v1.full.pdf eng eng BioRxiv https://research.rug.nl/en/publications/36c28fe3-b17c-4e8c-8994-7779e225c8e3 info:eu-repo/semantics/restrictedAccess Suárez-Menéndez , M , Bérubé , M , Furni , F , Rivera-León , V E , Heide-Jørgensen , M-P , Larsen , F , Sears , R , Ramp , C , Eriksson , B K , Etienne , R S , Robbins , J & Palsbøll , P J 2022 ' Direct estimation of genome mutation rates from pedigrees in free-ranging baleen whales ' BioRxiv . https://doi.org/10.1101/2022.10.06.510775 workingPaper 2022 ftunigroningenpu https://doi.org/10.1101/2022.10.06.510775 2024-05-27T17:24:59Z Current low germline mutation rate () estimates in baleen whales have greatly influenced research ranging from assessments of whaling impacts to evolutionary cancer biology. However, the reported rates were subject to methodological errors and uncertainty. We estimated directly from pedigrees in natural populations of four baleen whale species and the results were similar to primates. The implications of revised values include pre-exploitation population sizes at 14% of previous genetic diversity-based estimates and the conclusion that in itself is insufficient to explain low cancer rates in gigantic mammals (i.e., Peto’s Paradox). We demonstrate the feasibility of estimating from whole genome pedigree data in natural populations, which has wide-ranging implications for the many ecological and evolutionary inferences that rely on . Report baleen whale baleen whales University of Groningen research database |
institution |
Open Polar |
collection |
University of Groningen research database |
op_collection_id |
ftunigroningenpu |
language |
English |
description |
Current low germline mutation rate () estimates in baleen whales have greatly influenced research ranging from assessments of whaling impacts to evolutionary cancer biology. However, the reported rates were subject to methodological errors and uncertainty. We estimated directly from pedigrees in natural populations of four baleen whale species and the results were similar to primates. The implications of revised values include pre-exploitation population sizes at 14% of previous genetic diversity-based estimates and the conclusion that in itself is insufficient to explain low cancer rates in gigantic mammals (i.e., Peto’s Paradox). We demonstrate the feasibility of estimating from whole genome pedigree data in natural populations, which has wide-ranging implications for the many ecological and evolutionary inferences that rely on . |
format |
Report |
author |
Suárez-Menéndez, Marcos Bérubé, Martine Furni, Fabrício Rivera-León, Vania E. Heide-Jørgensen, Mads-Peter Larsen, Finn Sears, Richard Ramp, Christian Eriksson, Britas Klemens Etienne, Rampal S. Robbins, Jooke Palsbøll, Per J. |
spellingShingle |
Suárez-Menéndez, Marcos Bérubé, Martine Furni, Fabrício Rivera-León, Vania E. Heide-Jørgensen, Mads-Peter Larsen, Finn Sears, Richard Ramp, Christian Eriksson, Britas Klemens Etienne, Rampal S. Robbins, Jooke Palsbøll, Per J. Direct estimation of genome mutation rates from pedigrees in free-ranging baleen whales |
author_facet |
Suárez-Menéndez, Marcos Bérubé, Martine Furni, Fabrício Rivera-León, Vania E. Heide-Jørgensen, Mads-Peter Larsen, Finn Sears, Richard Ramp, Christian Eriksson, Britas Klemens Etienne, Rampal S. Robbins, Jooke Palsbøll, Per J. |
author_sort |
Suárez-Menéndez, Marcos |
title |
Direct estimation of genome mutation rates from pedigrees in free-ranging baleen whales |
title_short |
Direct estimation of genome mutation rates from pedigrees in free-ranging baleen whales |
title_full |
Direct estimation of genome mutation rates from pedigrees in free-ranging baleen whales |
title_fullStr |
Direct estimation of genome mutation rates from pedigrees in free-ranging baleen whales |
title_full_unstemmed |
Direct estimation of genome mutation rates from pedigrees in free-ranging baleen whales |
title_sort |
direct estimation of genome mutation rates from pedigrees in free-ranging baleen whales |
publisher |
BioRxiv |
publishDate |
2022 |
url |
https://hdl.handle.net/11370/36c28fe3-b17c-4e8c-8994-7779e225c8e3 https://research.rug.nl/en/publications/36c28fe3-b17c-4e8c-8994-7779e225c8e3 https://doi.org/10.1101/2022.10.06.510775 https://pure.rug.nl/ws/files/646983911/2022.10.06.510775v1.full.pdf |
genre |
baleen whale baleen whales |
genre_facet |
baleen whale baleen whales |
op_source |
Suárez-Menéndez , M , Bérubé , M , Furni , F , Rivera-León , V E , Heide-Jørgensen , M-P , Larsen , F , Sears , R , Ramp , C , Eriksson , B K , Etienne , R S , Robbins , J & Palsbøll , P J 2022 ' Direct estimation of genome mutation rates from pedigrees in free-ranging baleen whales ' BioRxiv . https://doi.org/10.1101/2022.10.06.510775 |
op_relation |
https://research.rug.nl/en/publications/36c28fe3-b17c-4e8c-8994-7779e225c8e3 |
op_rights |
info:eu-repo/semantics/restrictedAccess |
op_doi |
https://doi.org/10.1101/2022.10.06.510775 |
_version_ |
1802642679271522304 |