Complete genomic sequence and taxonomic position of eel virus European X (EVEX), a rhabdovirus of European eel.
International audience Eel virus European X (EVEX) was first isolated from diseased European eel Anguilla anguilla in Japan at the end of seventies. The virus was tentatively classified into the Rhabdoviridae family on the basis of morphology and serological cross reactivity. This family of viruses...
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Format: | Article in Journal/Newspaper |
Language: | English |
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Online Access: | https://hal.science/halsde-00700373 https://doi.org/10.1016/j.virusres.2012.02.020 |
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ftunigrenoble:oai:HAL:halsde-00700373v1 2024-04-14T08:01:01+00:00 Complete genomic sequence and taxonomic position of eel virus European X (EVEX), a rhabdovirus of European eel. Galinier, Richard van Beurden, Steven Amilhat, Elsa Castric, Jeannette Schoehn, Guy Verneau, Olivier Fazio, Géraldine Allienne, Jean-François Engelsma, Marc Sasal, Pierre Faliex, Elisabeth Ecologie et évolution des interactions 2011-2014 (2EI) Université de Perpignan Via Domitia (UPVD)-Centre National de la Recherche Scientifique (CNRS) Unit of Virus Host Cell Interactions = Biologie structurale des interactions entre virus et cellule hôte (UVHCI) Université Joseph Fourier - Grenoble 1 (UJF)-European Molecular Biology Laboratory Grenoble (EMBL)-Centre National de la Recherche Scientifique (CNRS) Institut de biologie structurale (IBS - UMR 5075 ) Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes 2016-2019 (UGA 2016-2019 )-Institut de Recherche Interdisciplinaire de Grenoble (IRIG) Direction de Recherche Fondamentale (CEA) (DRF (CEA)) Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)) Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA) Biologie et écologie tropicale et méditerranéenne 2007-2010 (BETM) Université de Perpignan Via Domitia (UPVD)-École Pratique des Hautes Études (EPHE) Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS) Centre de recherches insulaires et observatoire de l'environnement (CRIOBE) 2012-06 https://hal.science/halsde-00700373 https://doi.org/10.1016/j.virusres.2012.02.020 en eng HAL CCSD info:eu-repo/semantics/altIdentifier/doi/10.1016/j.virusres.2012.02.020 info:eu-repo/semantics/altIdentifier/pmid/22401847 halsde-00700373 https://hal.science/halsde-00700373 doi:10.1016/j.virusres.2012.02.020 PUBMED: 22401847 Virus Res https://hal.science/halsde-00700373 Virus Res, 2012, 166 (1-2), pp.1-12. ⟨10.1016/j.virusres.2012.02.020⟩ [SDE.BE]Environmental Sciences/Biodiversity and Ecology info:eu-repo/semantics/article Journal articles 2012 ftunigrenoble https://doi.org/10.1016/j.virusres.2012.02.020 2024-03-21T16:05:14Z International audience Eel virus European X (EVEX) was first isolated from diseased European eel Anguilla anguilla in Japan at the end of seventies. The virus was tentatively classified into the Rhabdoviridae family on the basis of morphology and serological cross reactivity. This family of viruses is organized into six genera and currently comprises approximately 200 members, many of which are still unassigned because of the lack of molecular data. This work presents the morphological, biochemical and genetic characterizations of EVEX, and proposes a taxonomic classification for this virus. We provide its complete genome sequence, plus a comprehensive sequence comparison between isolates from different geographical origins. The genome encodes the five classical structural proteins plus an overlapping open reading frame in the phosphoprotein gene, coding for a putative C protein. Phylogenic relationship with other rhabdoviruses indicates that EVEX is most closely related to the Vesiculovirus genus and shares the highest identity with trout rhabdovirus 903/87. Article in Journal/Newspaper Anguilla anguilla Université Grenoble Alpes: HAL Virus Research 166 1-2 1 12 |
institution |
Open Polar |
collection |
Université Grenoble Alpes: HAL |
op_collection_id |
ftunigrenoble |
language |
English |
topic |
[SDE.BE]Environmental Sciences/Biodiversity and Ecology |
spellingShingle |
[SDE.BE]Environmental Sciences/Biodiversity and Ecology Galinier, Richard van Beurden, Steven Amilhat, Elsa Castric, Jeannette Schoehn, Guy Verneau, Olivier Fazio, Géraldine Allienne, Jean-François Engelsma, Marc Sasal, Pierre Faliex, Elisabeth Complete genomic sequence and taxonomic position of eel virus European X (EVEX), a rhabdovirus of European eel. |
topic_facet |
[SDE.BE]Environmental Sciences/Biodiversity and Ecology |
description |
International audience Eel virus European X (EVEX) was first isolated from diseased European eel Anguilla anguilla in Japan at the end of seventies. The virus was tentatively classified into the Rhabdoviridae family on the basis of morphology and serological cross reactivity. This family of viruses is organized into six genera and currently comprises approximately 200 members, many of which are still unassigned because of the lack of molecular data. This work presents the morphological, biochemical and genetic characterizations of EVEX, and proposes a taxonomic classification for this virus. We provide its complete genome sequence, plus a comprehensive sequence comparison between isolates from different geographical origins. The genome encodes the five classical structural proteins plus an overlapping open reading frame in the phosphoprotein gene, coding for a putative C protein. Phylogenic relationship with other rhabdoviruses indicates that EVEX is most closely related to the Vesiculovirus genus and shares the highest identity with trout rhabdovirus 903/87. |
author2 |
Ecologie et évolution des interactions 2011-2014 (2EI) Université de Perpignan Via Domitia (UPVD)-Centre National de la Recherche Scientifique (CNRS) Unit of Virus Host Cell Interactions = Biologie structurale des interactions entre virus et cellule hôte (UVHCI) Université Joseph Fourier - Grenoble 1 (UJF)-European Molecular Biology Laboratory Grenoble (EMBL)-Centre National de la Recherche Scientifique (CNRS) Institut de biologie structurale (IBS - UMR 5075 ) Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes 2016-2019 (UGA 2016-2019 )-Institut de Recherche Interdisciplinaire de Grenoble (IRIG) Direction de Recherche Fondamentale (CEA) (DRF (CEA)) Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)) Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA) Biologie et écologie tropicale et méditerranéenne 2007-2010 (BETM) Université de Perpignan Via Domitia (UPVD)-École Pratique des Hautes Études (EPHE) Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS) Centre de recherches insulaires et observatoire de l'environnement (CRIOBE) |
format |
Article in Journal/Newspaper |
author |
Galinier, Richard van Beurden, Steven Amilhat, Elsa Castric, Jeannette Schoehn, Guy Verneau, Olivier Fazio, Géraldine Allienne, Jean-François Engelsma, Marc Sasal, Pierre Faliex, Elisabeth |
author_facet |
Galinier, Richard van Beurden, Steven Amilhat, Elsa Castric, Jeannette Schoehn, Guy Verneau, Olivier Fazio, Géraldine Allienne, Jean-François Engelsma, Marc Sasal, Pierre Faliex, Elisabeth |
author_sort |
Galinier, Richard |
title |
Complete genomic sequence and taxonomic position of eel virus European X (EVEX), a rhabdovirus of European eel. |
title_short |
Complete genomic sequence and taxonomic position of eel virus European X (EVEX), a rhabdovirus of European eel. |
title_full |
Complete genomic sequence and taxonomic position of eel virus European X (EVEX), a rhabdovirus of European eel. |
title_fullStr |
Complete genomic sequence and taxonomic position of eel virus European X (EVEX), a rhabdovirus of European eel. |
title_full_unstemmed |
Complete genomic sequence and taxonomic position of eel virus European X (EVEX), a rhabdovirus of European eel. |
title_sort |
complete genomic sequence and taxonomic position of eel virus european x (evex), a rhabdovirus of european eel. |
publisher |
HAL CCSD |
publishDate |
2012 |
url |
https://hal.science/halsde-00700373 https://doi.org/10.1016/j.virusres.2012.02.020 |
genre |
Anguilla anguilla |
genre_facet |
Anguilla anguilla |
op_source |
Virus Res https://hal.science/halsde-00700373 Virus Res, 2012, 166 (1-2), pp.1-12. ⟨10.1016/j.virusres.2012.02.020⟩ |
op_relation |
info:eu-repo/semantics/altIdentifier/doi/10.1016/j.virusres.2012.02.020 info:eu-repo/semantics/altIdentifier/pmid/22401847 halsde-00700373 https://hal.science/halsde-00700373 doi:10.1016/j.virusres.2012.02.020 PUBMED: 22401847 |
op_doi |
https://doi.org/10.1016/j.virusres.2012.02.020 |
container_title |
Virus Research |
container_volume |
166 |
container_issue |
1-2 |
container_start_page |
1 |
op_container_end_page |
12 |
_version_ |
1796306394157154304 |