The hemoglobins of the sub-Antarctic fish Cottoperca gobio, a phyletically basal species - Oxygen-binding equilibria, kinetics and molecular dynamics

The dominant perciform suborder Notothenioidei is an excellent study group for assessing the evolution and functional importance of biochemical adaptations to temperature. The availability of notothenioid taxa in a wide range of latitudes (Antarctic and non-Antarctic) provides a tool to enable ident...

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Main Authors: Giordano, D., Boechi, L., Vergara, A., Martí, M.A., Samuni, U., Dantsker, D., Grassi, L., Estrin, D.A., Friedman, J.M., Mazzarella, L., Di Prisco, G., Verde, C.
Format: Journal/Newspaper
Language:unknown
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Online Access:https://hdl.handle.net/20.500.12110/paper_1742464X_v276_n8_p2266_Giordano
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spelling ftunibueairesbd:todo:paper_1742464X_v276_n8_p2266_Giordano 2023-10-29T02:32:05+01:00 The hemoglobins of the sub-Antarctic fish Cottoperca gobio, a phyletically basal species - Oxygen-binding equilibria, kinetics and molecular dynamics Giordano, D. Boechi, L. Vergara, A. Martí, M.A. Samuni, U. Dantsker, D. Grassi, L. Estrin, D.A. Friedman, J.M. Mazzarella, L. Di Prisco, G. Verde, C. https://hdl.handle.net/20.500.12110/paper_1742464X_v276_n8_p2266_Giordano unknown http://hdl.handle.net/20.500.12110/paper_1742464X_v276_n8_p2266_Giordano info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by/2.5/ar Antarctica Computer simulation Hemoglobin Ligand-binding properties Oxygen affinity hemoglobin beta chain protein article Bohr effect Cottoperca gobio fish hemoglobin analysis kinetics latitude migration modulation molecular dynamics nonhuman priority journal simulation teleost Amino Acid Sequence Animals Binding Sites Fishes Hemoglobins Hydrogen-Ion Concentration Molecular Sequence Data Oxygen Phylogeny Species Specificity Structure-Activity Relationship Thermodynamics Acanthomorpha Bovichthyidae Notothenioidei Perciformes Teleostei JOUR ftunibueairesbd https://doi.org/20.500.12110/paper_1742464X_v276_n8_p2266_Giordano 2023-10-05T01:55:31Z The dominant perciform suborder Notothenioidei is an excellent study group for assessing the evolution and functional importance of biochemical adaptations to temperature. The availability of notothenioid taxa in a wide range of latitudes (Antarctic and non-Antarctic) provides a tool to enable identification of physiological and biochemical characteristics gained and lost during evolutionary history. Non-Antarctic notothenioids belonging to the most basal families are a crucial source for understanding the evolution of hemoglobin in high-Antarctic cold-adapted fish. This paper focuses on the structure, function and evolution of the oxygen-transport system of Cottoperca gobio, a sub-Antarctic notothenioid fish of the family Bovichtidae, probably derived from ancestral species that evolved in the Antarctic region and later migrated to lower latitudes. Unlike most high-Antarctic notothenioids, but similar to many other acanthomorph teleosts, C. gobio has two major hemoglobins having the β chain in common. The oxygen-binding equilibria and kinetics of the two hemoglobins have been measured. Hb1 and Hb2 show strong modulation of oxygen-binding equilibria and kinetics by heterotropic effectors, with marked Bohr and Root effects. In Hb1 and Hb2, oxygen affinity and subunit cooperativity are slightly higher than in most high-Antarctic notothenioid hemoglobins. Hb1 and Hb2 show similar rebinding rates, but also show significant dynamic differences that are likely to have functional consequences. Molecular dynamic simulations of C. gobio Hb1 were performed on the dimeric protein in order to obtain a better understanding of the molecular basis of structure/function relationships. © 2009 FEBS. Journal/Newspaper Antarc* Antarctic Antarctica Biblioteca Digital FCEN-UBA (Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires)
institution Open Polar
collection Biblioteca Digital FCEN-UBA (Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires)
op_collection_id ftunibueairesbd
language unknown
topic Antarctica
Computer simulation
Hemoglobin
Ligand-binding properties
Oxygen affinity
hemoglobin beta chain
protein
article
Bohr effect
Cottoperca gobio
fish
hemoglobin analysis
kinetics
latitude
migration
modulation
molecular dynamics
nonhuman
priority journal
simulation
teleost
Amino Acid Sequence
Animals
Binding Sites
Fishes
Hemoglobins
Hydrogen-Ion Concentration
Molecular Sequence Data
Oxygen
Phylogeny
Species Specificity
Structure-Activity Relationship
Thermodynamics
Acanthomorpha
Bovichthyidae
Notothenioidei
Perciformes
Teleostei
spellingShingle Antarctica
Computer simulation
Hemoglobin
Ligand-binding properties
Oxygen affinity
hemoglobin beta chain
protein
article
Bohr effect
Cottoperca gobio
fish
hemoglobin analysis
kinetics
latitude
migration
modulation
molecular dynamics
nonhuman
priority journal
simulation
teleost
Amino Acid Sequence
Animals
Binding Sites
Fishes
Hemoglobins
Hydrogen-Ion Concentration
Molecular Sequence Data
Oxygen
Phylogeny
Species Specificity
Structure-Activity Relationship
Thermodynamics
Acanthomorpha
Bovichthyidae
Notothenioidei
Perciformes
Teleostei
Giordano, D.
Boechi, L.
Vergara, A.
Martí, M.A.
Samuni, U.
Dantsker, D.
Grassi, L.
Estrin, D.A.
Friedman, J.M.
Mazzarella, L.
Di Prisco, G.
Verde, C.
The hemoglobins of the sub-Antarctic fish Cottoperca gobio, a phyletically basal species - Oxygen-binding equilibria, kinetics and molecular dynamics
topic_facet Antarctica
Computer simulation
Hemoglobin
Ligand-binding properties
Oxygen affinity
hemoglobin beta chain
protein
article
Bohr effect
Cottoperca gobio
fish
hemoglobin analysis
kinetics
latitude
migration
modulation
molecular dynamics
nonhuman
priority journal
simulation
teleost
Amino Acid Sequence
Animals
Binding Sites
Fishes
Hemoglobins
Hydrogen-Ion Concentration
Molecular Sequence Data
Oxygen
Phylogeny
Species Specificity
Structure-Activity Relationship
Thermodynamics
Acanthomorpha
Bovichthyidae
Notothenioidei
Perciformes
Teleostei
description The dominant perciform suborder Notothenioidei is an excellent study group for assessing the evolution and functional importance of biochemical adaptations to temperature. The availability of notothenioid taxa in a wide range of latitudes (Antarctic and non-Antarctic) provides a tool to enable identification of physiological and biochemical characteristics gained and lost during evolutionary history. Non-Antarctic notothenioids belonging to the most basal families are a crucial source for understanding the evolution of hemoglobin in high-Antarctic cold-adapted fish. This paper focuses on the structure, function and evolution of the oxygen-transport system of Cottoperca gobio, a sub-Antarctic notothenioid fish of the family Bovichtidae, probably derived from ancestral species that evolved in the Antarctic region and later migrated to lower latitudes. Unlike most high-Antarctic notothenioids, but similar to many other acanthomorph teleosts, C. gobio has two major hemoglobins having the β chain in common. The oxygen-binding equilibria and kinetics of the two hemoglobins have been measured. Hb1 and Hb2 show strong modulation of oxygen-binding equilibria and kinetics by heterotropic effectors, with marked Bohr and Root effects. In Hb1 and Hb2, oxygen affinity and subunit cooperativity are slightly higher than in most high-Antarctic notothenioid hemoglobins. Hb1 and Hb2 show similar rebinding rates, but also show significant dynamic differences that are likely to have functional consequences. Molecular dynamic simulations of C. gobio Hb1 were performed on the dimeric protein in order to obtain a better understanding of the molecular basis of structure/function relationships. © 2009 FEBS.
format Journal/Newspaper
author Giordano, D.
Boechi, L.
Vergara, A.
Martí, M.A.
Samuni, U.
Dantsker, D.
Grassi, L.
Estrin, D.A.
Friedman, J.M.
Mazzarella, L.
Di Prisco, G.
Verde, C.
author_facet Giordano, D.
Boechi, L.
Vergara, A.
Martí, M.A.
Samuni, U.
Dantsker, D.
Grassi, L.
Estrin, D.A.
Friedman, J.M.
Mazzarella, L.
Di Prisco, G.
Verde, C.
author_sort Giordano, D.
title The hemoglobins of the sub-Antarctic fish Cottoperca gobio, a phyletically basal species - Oxygen-binding equilibria, kinetics and molecular dynamics
title_short The hemoglobins of the sub-Antarctic fish Cottoperca gobio, a phyletically basal species - Oxygen-binding equilibria, kinetics and molecular dynamics
title_full The hemoglobins of the sub-Antarctic fish Cottoperca gobio, a phyletically basal species - Oxygen-binding equilibria, kinetics and molecular dynamics
title_fullStr The hemoglobins of the sub-Antarctic fish Cottoperca gobio, a phyletically basal species - Oxygen-binding equilibria, kinetics and molecular dynamics
title_full_unstemmed The hemoglobins of the sub-Antarctic fish Cottoperca gobio, a phyletically basal species - Oxygen-binding equilibria, kinetics and molecular dynamics
title_sort hemoglobins of the sub-antarctic fish cottoperca gobio, a phyletically basal species - oxygen-binding equilibria, kinetics and molecular dynamics
url https://hdl.handle.net/20.500.12110/paper_1742464X_v276_n8_p2266_Giordano
genre Antarc*
Antarctic
Antarctica
genre_facet Antarc*
Antarctic
Antarctica
op_relation http://hdl.handle.net/20.500.12110/paper_1742464X_v276_n8_p2266_Giordano
op_rights info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by/2.5/ar
op_doi https://doi.org/20.500.12110/paper_1742464X_v276_n8_p2266_Giordano
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