Spirosoma spitsbergense sp. nov. and Spirosoma luteum sp. nov., isolated from a high Arctic permafrost soil, and emended description of the genus Spirosoma .
Udgivelsesdato: 2009 Two pigmented, Gram-negative, non-motile, pleomorphic rod-shaped bacteria (strains SPM-9 T and SPM-10 T ) were isolated from a permafrost soil collected from the Adventdalen valley, Spitsbergen, northern Norway. A third isolate (strain M5-H2) was recovered from the same soil sam...
Published in: | INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY |
---|---|
Main Authors: | , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
2009
|
Subjects: | |
Online Access: | https://pure.au.dk/portal/en/publications/b3b174c0-3afa-11de-8dc9-000ea68e967b https://doi.org/10.1099/ijs.0.002725-0 |
id |
ftuniaarhuspubl:oai:pure.atira.dk:publications/b3b174c0-3afa-11de-8dc9-000ea68e967b |
---|---|
record_format |
openpolar |
spelling |
ftuniaarhuspubl:oai:pure.atira.dk:publications/b3b174c0-3afa-11de-8dc9-000ea68e967b 2024-02-04T09:52:19+01:00 Spirosoma spitsbergense sp. nov. and Spirosoma luteum sp. nov., isolated from a high Arctic permafrost soil, and emended description of the genus Spirosoma . Finster, Kai Herbert, Rodney Andrew Lomstein, Bente Aagaard 2009 https://pure.au.dk/portal/en/publications/b3b174c0-3afa-11de-8dc9-000ea68e967b https://doi.org/10.1099/ijs.0.002725-0 eng eng https://pure.au.dk/portal/en/publications/b3b174c0-3afa-11de-8dc9-000ea68e967b info:eu-repo/semantics/restrictedAccess Finster , K , Herbert , R A & Lomstein , B A 2009 , ' Spirosoma spitsbergense sp. nov. and Spirosoma luteum sp. nov., isolated from a high Arctic permafrost soil, and emended description of the genus Spirosoma . ' , International Journal of Systematic and Evolutionary Microbiology , vol. 59 , pp. 839-844 . https://doi.org/10.1099/ijs.0.002725-0 article 2009 ftuniaarhuspubl https://doi.org/10.1099/ijs.0.002725-0 2024-01-10T23:58:59Z Udgivelsesdato: 2009 Two pigmented, Gram-negative, non-motile, pleomorphic rod-shaped bacteria (strains SPM-9 T and SPM-10 T ) were isolated from a permafrost soil collected from the Adventdalen valley, Spitsbergen, northern Norway. A third isolate (strain M5-H2) was recovered from the same soil sample after the sample had been exposed to simulated Martian environmental conditions. The three strains were characterized taxonomically by using a polyphasic approach. Phylogenetic, chemotaxonomic, physiological and morphological analyses demonstrated that the three isolates were most closely related to members of the genus Spirosoma . 16S rRNA gene sequence data indicated that the three isolates could be divided into two clusters: (i) strain SPM-9 T and (ii) strains SPM-10 T and M5-H2. This grouping was confirmed by DNA-DNA hybridization experiments. Strains SPM-9 T and SPM-10 T exhibited 92 % 16S rRNA gene sequence similarity to both Spirosoma linguale LMG 10896 T and Spirosoma rigui WPCB 118 T . The major fatty acids present in all three isolates were summed feature 3 (comprising iso-C 15:0 2-OH and/or C 16 : 1 7 c 43.0-48.2 % of the total), C 16 : 1 5 c (19.1-21.3 %), C 16 : 0 (6.7-7.3 %), iso-C 17 : 0 3-OH (4.7-6.0 %) and iso-C 15 : 0 (2.6-5.7 %). On the basis of their phenotypic and genotypic characteristics, the new strains are assigned to two novel species of the genus Spirosoma , for which the names Spirosoma spitsbergense sp. nov. and Spirosoma luteum sp. nov. are proposed. The type strain of Spirosoma spitsbergense is SPM-9 T (=NCIMB 14407 T =DSM 19989 T ) and the type strain of Spirosoma luteum is SPM-10 T (=NCIMB 14406 T =DSM 19990 T ). An emended description of the genus Spirosoma is also proposed. Article in Journal/Newspaper Adventdalen Arctic Arctic Northern Norway permafrost Spitsbergen Aarhus University: Research Adventdalen ENVELOPE(16.264,16.264,78.181,78.181) Arctic Norway INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 59 4 839 844 |
institution |
Open Polar |
collection |
Aarhus University: Research |
op_collection_id |
ftuniaarhuspubl |
language |
English |
description |
Udgivelsesdato: 2009 Two pigmented, Gram-negative, non-motile, pleomorphic rod-shaped bacteria (strains SPM-9 T and SPM-10 T ) were isolated from a permafrost soil collected from the Adventdalen valley, Spitsbergen, northern Norway. A third isolate (strain M5-H2) was recovered from the same soil sample after the sample had been exposed to simulated Martian environmental conditions. The three strains were characterized taxonomically by using a polyphasic approach. Phylogenetic, chemotaxonomic, physiological and morphological analyses demonstrated that the three isolates were most closely related to members of the genus Spirosoma . 16S rRNA gene sequence data indicated that the three isolates could be divided into two clusters: (i) strain SPM-9 T and (ii) strains SPM-10 T and M5-H2. This grouping was confirmed by DNA-DNA hybridization experiments. Strains SPM-9 T and SPM-10 T exhibited 92 % 16S rRNA gene sequence similarity to both Spirosoma linguale LMG 10896 T and Spirosoma rigui WPCB 118 T . The major fatty acids present in all three isolates were summed feature 3 (comprising iso-C 15:0 2-OH and/or C 16 : 1 7 c 43.0-48.2 % of the total), C 16 : 1 5 c (19.1-21.3 %), C 16 : 0 (6.7-7.3 %), iso-C 17 : 0 3-OH (4.7-6.0 %) and iso-C 15 : 0 (2.6-5.7 %). On the basis of their phenotypic and genotypic characteristics, the new strains are assigned to two novel species of the genus Spirosoma , for which the names Spirosoma spitsbergense sp. nov. and Spirosoma luteum sp. nov. are proposed. The type strain of Spirosoma spitsbergense is SPM-9 T (=NCIMB 14407 T =DSM 19989 T ) and the type strain of Spirosoma luteum is SPM-10 T (=NCIMB 14406 T =DSM 19990 T ). An emended description of the genus Spirosoma is also proposed. |
format |
Article in Journal/Newspaper |
author |
Finster, Kai Herbert, Rodney Andrew Lomstein, Bente Aagaard |
spellingShingle |
Finster, Kai Herbert, Rodney Andrew Lomstein, Bente Aagaard Spirosoma spitsbergense sp. nov. and Spirosoma luteum sp. nov., isolated from a high Arctic permafrost soil, and emended description of the genus Spirosoma . |
author_facet |
Finster, Kai Herbert, Rodney Andrew Lomstein, Bente Aagaard |
author_sort |
Finster, Kai |
title |
Spirosoma spitsbergense sp. nov. and Spirosoma luteum sp. nov., isolated from a high Arctic permafrost soil, and emended description of the genus Spirosoma . |
title_short |
Spirosoma spitsbergense sp. nov. and Spirosoma luteum sp. nov., isolated from a high Arctic permafrost soil, and emended description of the genus Spirosoma . |
title_full |
Spirosoma spitsbergense sp. nov. and Spirosoma luteum sp. nov., isolated from a high Arctic permafrost soil, and emended description of the genus Spirosoma . |
title_fullStr |
Spirosoma spitsbergense sp. nov. and Spirosoma luteum sp. nov., isolated from a high Arctic permafrost soil, and emended description of the genus Spirosoma . |
title_full_unstemmed |
Spirosoma spitsbergense sp. nov. and Spirosoma luteum sp. nov., isolated from a high Arctic permafrost soil, and emended description of the genus Spirosoma . |
title_sort |
spirosoma spitsbergense sp. nov. and spirosoma luteum sp. nov., isolated from a high arctic permafrost soil, and emended description of the genus spirosoma . |
publishDate |
2009 |
url |
https://pure.au.dk/portal/en/publications/b3b174c0-3afa-11de-8dc9-000ea68e967b https://doi.org/10.1099/ijs.0.002725-0 |
long_lat |
ENVELOPE(16.264,16.264,78.181,78.181) |
geographic |
Adventdalen Arctic Norway |
geographic_facet |
Adventdalen Arctic Norway |
genre |
Adventdalen Arctic Arctic Northern Norway permafrost Spitsbergen |
genre_facet |
Adventdalen Arctic Arctic Northern Norway permafrost Spitsbergen |
op_source |
Finster , K , Herbert , R A & Lomstein , B A 2009 , ' Spirosoma spitsbergense sp. nov. and Spirosoma luteum sp. nov., isolated from a high Arctic permafrost soil, and emended description of the genus Spirosoma . ' , International Journal of Systematic and Evolutionary Microbiology , vol. 59 , pp. 839-844 . https://doi.org/10.1099/ijs.0.002725-0 |
op_relation |
https://pure.au.dk/portal/en/publications/b3b174c0-3afa-11de-8dc9-000ea68e967b |
op_rights |
info:eu-repo/semantics/restrictedAccess |
op_doi |
https://doi.org/10.1099/ijs.0.002725-0 |
container_title |
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY |
container_volume |
59 |
container_issue |
4 |
container_start_page |
839 |
op_container_end_page |
844 |
_version_ |
1789965998266253312 |