Speciation history of European ( Anguilla anguilla ) and American eel ( A. rostrata ), analysed using genomic data

Speciation in the ocean could differ from terrestrial environments due to fewer barriers to gene flow. Hence, sympatric speciation might be common, with American and European eel being candidates for exemplifying this. They show disjunct continental distributions on both sides of the Atlantic, but s...

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Published in:Molecular Ecology
Main Authors: Nikolic, Natacha, Liu, Shenglin, Jacobsen, Magnus W., Jónsson, Bjarni, Bernatchez, Louis, Gagnaire, Pierre Alexandre, Hansen, Michael M.
Format: Article in Journal/Newspaper
Language:English
Published: 2020
Subjects:
Online Access:https://pure.au.dk/portal/da/publications/speciation-history-of-european-anguilla-anguilla-and-american-eel-arostrata-analysed-using-genomic-data(210f6b71-bb17-4971-8288-55361322fb53).html
https://doi.org/10.1111/mec.15342
http://www.scopus.com/inward/record.url?scp=85077847683&partnerID=8YFLogxK
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spelling ftuniaarhuspubl:oai:pure.atira.dk:publications/210f6b71-bb17-4971-8288-55361322fb53 2023-12-31T09:59:03+01:00 Speciation history of European ( Anguilla anguilla ) and American eel ( A. rostrata ), analysed using genomic data Nikolic, Natacha Liu, Shenglin Jacobsen, Magnus W. Jónsson, Bjarni Bernatchez, Louis Gagnaire, Pierre Alexandre Hansen, Michael M. 2020 https://pure.au.dk/portal/da/publications/speciation-history-of-european-anguilla-anguilla-and-american-eel-arostrata-analysed-using-genomic-data(210f6b71-bb17-4971-8288-55361322fb53).html https://doi.org/10.1111/mec.15342 http://www.scopus.com/inward/record.url?scp=85077847683&partnerID=8YFLogxK eng eng https://pure.au.dk/portal/da/publications/speciation-history-of-european-anguilla-anguilla-and-american-eel-arostrata-analysed-using-genomic-data(210f6b71-bb17-4971-8288-55361322fb53).html info:eu-repo/semantics/restrictedAccess Nikolic , N , Liu , S , Jacobsen , M W , Jónsson , B , Bernatchez , L , Gagnaire , P A & Hansen , M M 2020 , ' Speciation history of European ( Anguilla anguilla ) and American eel ( A. rostrata ), analysed using genomic data ' , Molecular Ecology , vol. 29 , no. 3 , pp. 565-577 . https://doi.org/10.1111/mec.15342 allele frequency spectrum Anguilla spp PSMC secondary contact sympatric speciation vicariance article 2020 ftuniaarhuspubl https://doi.org/10.1111/mec.15342 2023-12-07T00:04:01Z Speciation in the ocean could differ from terrestrial environments due to fewer barriers to gene flow. Hence, sympatric speciation might be common, with American and European eel being candidates for exemplifying this. They show disjunct continental distributions on both sides of the Atlantic, but spawn in overlapping regions of the Sargasso Sea from where juveniles are advected to North American, European and North African coasts. Hybridization and introgression are known to occur, with hybrids almost exclusively observed in Iceland. Different speciation scenarios have been suggested, involving either vicariance or sympatric ecological speciation. Using RAD sequencing and whole-genome sequencing data from parental species and F1 hybrids, we analysed speciation history based on the joint allele frequency spectrum (JAFS) and pairwise sequentially Markovian coalescent (PSMC) plots. JAFS supported a model involving a split without gene flow 150,000–160,000 generations ago, followed by secondary contact 87,000–92,000 generations ago, with 64% of the genome experiencing restricted gene flow. This supports vicariance rather than sympatric speciation, likely associated with Pleistocene glaciation cycles and ocean current changes. Whole-genome PSMC analysis of F1 hybrids from Iceland suggested divergence 200,000 generations ago and indicated subsequent gene flow rather than strict isolation. Finally, simulations showed that results from both approaches (JAFS and PSMC) were congruent. Hence, there is strong evidence against sympatric speciation in North Atlantic eels. These results reiterate the need for careful consideration of cases of possible sympatric speciation, as even in seemingly barrier-free oceanic environments palaeoceanographic factors may have promoted vicariance and allopatric speciation. Article in Journal/Newspaper Anguilla anguilla European eel Iceland North Atlantic Aarhus University: Research Molecular Ecology 29 3 565 577
institution Open Polar
collection Aarhus University: Research
op_collection_id ftuniaarhuspubl
language English
topic allele frequency spectrum
Anguilla spp
PSMC
secondary contact
sympatric speciation
vicariance
spellingShingle allele frequency spectrum
Anguilla spp
PSMC
secondary contact
sympatric speciation
vicariance
Nikolic, Natacha
Liu, Shenglin
Jacobsen, Magnus W.
Jónsson, Bjarni
Bernatchez, Louis
Gagnaire, Pierre Alexandre
Hansen, Michael M.
Speciation history of European ( Anguilla anguilla ) and American eel ( A. rostrata ), analysed using genomic data
topic_facet allele frequency spectrum
Anguilla spp
PSMC
secondary contact
sympatric speciation
vicariance
description Speciation in the ocean could differ from terrestrial environments due to fewer barriers to gene flow. Hence, sympatric speciation might be common, with American and European eel being candidates for exemplifying this. They show disjunct continental distributions on both sides of the Atlantic, but spawn in overlapping regions of the Sargasso Sea from where juveniles are advected to North American, European and North African coasts. Hybridization and introgression are known to occur, with hybrids almost exclusively observed in Iceland. Different speciation scenarios have been suggested, involving either vicariance or sympatric ecological speciation. Using RAD sequencing and whole-genome sequencing data from parental species and F1 hybrids, we analysed speciation history based on the joint allele frequency spectrum (JAFS) and pairwise sequentially Markovian coalescent (PSMC) plots. JAFS supported a model involving a split without gene flow 150,000–160,000 generations ago, followed by secondary contact 87,000–92,000 generations ago, with 64% of the genome experiencing restricted gene flow. This supports vicariance rather than sympatric speciation, likely associated with Pleistocene glaciation cycles and ocean current changes. Whole-genome PSMC analysis of F1 hybrids from Iceland suggested divergence 200,000 generations ago and indicated subsequent gene flow rather than strict isolation. Finally, simulations showed that results from both approaches (JAFS and PSMC) were congruent. Hence, there is strong evidence against sympatric speciation in North Atlantic eels. These results reiterate the need for careful consideration of cases of possible sympatric speciation, as even in seemingly barrier-free oceanic environments palaeoceanographic factors may have promoted vicariance and allopatric speciation.
format Article in Journal/Newspaper
author Nikolic, Natacha
Liu, Shenglin
Jacobsen, Magnus W.
Jónsson, Bjarni
Bernatchez, Louis
Gagnaire, Pierre Alexandre
Hansen, Michael M.
author_facet Nikolic, Natacha
Liu, Shenglin
Jacobsen, Magnus W.
Jónsson, Bjarni
Bernatchez, Louis
Gagnaire, Pierre Alexandre
Hansen, Michael M.
author_sort Nikolic, Natacha
title Speciation history of European ( Anguilla anguilla ) and American eel ( A. rostrata ), analysed using genomic data
title_short Speciation history of European ( Anguilla anguilla ) and American eel ( A. rostrata ), analysed using genomic data
title_full Speciation history of European ( Anguilla anguilla ) and American eel ( A. rostrata ), analysed using genomic data
title_fullStr Speciation history of European ( Anguilla anguilla ) and American eel ( A. rostrata ), analysed using genomic data
title_full_unstemmed Speciation history of European ( Anguilla anguilla ) and American eel ( A. rostrata ), analysed using genomic data
title_sort speciation history of european ( anguilla anguilla ) and american eel ( a. rostrata ), analysed using genomic data
publishDate 2020
url https://pure.au.dk/portal/da/publications/speciation-history-of-european-anguilla-anguilla-and-american-eel-arostrata-analysed-using-genomic-data(210f6b71-bb17-4971-8288-55361322fb53).html
https://doi.org/10.1111/mec.15342
http://www.scopus.com/inward/record.url?scp=85077847683&partnerID=8YFLogxK
genre Anguilla anguilla
European eel
Iceland
North Atlantic
genre_facet Anguilla anguilla
European eel
Iceland
North Atlantic
op_source Nikolic , N , Liu , S , Jacobsen , M W , Jónsson , B , Bernatchez , L , Gagnaire , P A & Hansen , M M 2020 , ' Speciation history of European ( Anguilla anguilla ) and American eel ( A. rostrata ), analysed using genomic data ' , Molecular Ecology , vol. 29 , no. 3 , pp. 565-577 . https://doi.org/10.1111/mec.15342
op_relation https://pure.au.dk/portal/da/publications/speciation-history-of-european-anguilla-anguilla-and-american-eel-arostrata-analysed-using-genomic-data(210f6b71-bb17-4971-8288-55361322fb53).html
op_rights info:eu-repo/semantics/restrictedAccess
op_doi https://doi.org/10.1111/mec.15342
container_title Molecular Ecology
container_volume 29
container_issue 3
container_start_page 565
op_container_end_page 577
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