Molecular studies of rust on European aspen suggest an autochthonous relationship shaped by genotype

Forests are at increasing risk from pathogen outbreak. Climate change for example enhance the risk of local disease outbreaks, and naturalization of exotic pathogens may follow human activities, warranting robust pest surveillance routines to support forest management. Melampsora pinitorqua (pine tw...

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Published in:Frontiers in Plant Science
Main Authors: Siddique, Abu Bakar, Menke, Laura, Dinedurga, Melis, Albrectsen, Benedicte Riber
Format: Article in Journal/Newspaper
Language:English
Published: Umeå universitet, Institutionen för fysiologisk botanik 2023
Subjects:
PCR
Online Access:http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-205801
https://doi.org/10.3389/fpls.2023.1111001
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spelling ftumeauniv:oai:DiVA.org:umu-205801 2024-02-11T10:07:11+01:00 Molecular studies of rust on European aspen suggest an autochthonous relationship shaped by genotype Siddique, Abu Bakar Menke, Laura Dinedurga, Melis Albrectsen, Benedicte Riber 2023 application/pdf http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-205801 https://doi.org/10.3389/fpls.2023.1111001 eng eng Umeå universitet, Institutionen för fysiologisk botanik Umeå universitet, Umeå Plant Science Centre (UPSC) Frontiers in Plant Science, 2023, 14, orcid:0000-0002-3178-523x orcid:0000-0002-9337-4540 http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-205801 doi:10.3389/fpls.2023.1111001 ISI:000943358900001 Scopus 2-s2.0-85149620676 info:eu-repo/semantics/openAccess biomonitoring condensed tannins genotype effect Melampsora pathogen PCR Populus tremula surveillance Botany Botanik Forest Science Skogsvetenskap Article in journal info:eu-repo/semantics/article text 2023 ftumeauniv https://doi.org/10.3389/fpls.2023.1111001 2024-01-17T23:36:40Z Forests are at increasing risk from pathogen outbreak. Climate change for example enhance the risk of local disease outbreaks, and naturalization of exotic pathogens may follow human activities, warranting robust pest surveillance routines to support forest management. Melampsora pinitorqua (pine twisting rust) is of concern in Swedish forestry, and here we evaluate the use of visible rust scores (VRS) on its obligate summer host, European aspen (Populus tremula) as a tool for quantification of the pathogen. With use of species-specific primers, we could detect the native rust, but we failed to detect two exotic rusts (M. medusae and M. larici-populina). We found that aspen genotype determined the presence of fungal genetic markers (amplifying the ITS2 region of the fungal rDNA sequence) as well as DNA sequences specific to M. pinitorqua. We correlated VRS with the amount of fungal DNA in the same leaf, and we related the findings to aspen genotype-specific parameters such as the ability to synthesize and store leaf condensed tannins (CT). At the genotype level both positive and negative relationships were observed between CTs, fungal markers, and rust infestations. However, at the population level, foliar CT concentrations correlated negatively with general fungal- and rust-specific marker abundances. Our results, therefore, do not support the use of VRS to assess Melampsora infestation in Aspen. They do, however, suggest that the relationship between European aspen and rust infestation may be characterized as autochthonous in northern Sweden. Article in Journal/Newspaper Northern Sweden Umeå University: Publications (DiVA) Frontiers in Plant Science 14
institution Open Polar
collection Umeå University: Publications (DiVA)
op_collection_id ftumeauniv
language English
topic biomonitoring
condensed tannins
genotype effect
Melampsora
pathogen
PCR
Populus tremula
surveillance
Botany
Botanik
Forest Science
Skogsvetenskap
spellingShingle biomonitoring
condensed tannins
genotype effect
Melampsora
pathogen
PCR
Populus tremula
surveillance
Botany
Botanik
Forest Science
Skogsvetenskap
Siddique, Abu Bakar
Menke, Laura
Dinedurga, Melis
Albrectsen, Benedicte Riber
Molecular studies of rust on European aspen suggest an autochthonous relationship shaped by genotype
topic_facet biomonitoring
condensed tannins
genotype effect
Melampsora
pathogen
PCR
Populus tremula
surveillance
Botany
Botanik
Forest Science
Skogsvetenskap
description Forests are at increasing risk from pathogen outbreak. Climate change for example enhance the risk of local disease outbreaks, and naturalization of exotic pathogens may follow human activities, warranting robust pest surveillance routines to support forest management. Melampsora pinitorqua (pine twisting rust) is of concern in Swedish forestry, and here we evaluate the use of visible rust scores (VRS) on its obligate summer host, European aspen (Populus tremula) as a tool for quantification of the pathogen. With use of species-specific primers, we could detect the native rust, but we failed to detect two exotic rusts (M. medusae and M. larici-populina). We found that aspen genotype determined the presence of fungal genetic markers (amplifying the ITS2 region of the fungal rDNA sequence) as well as DNA sequences specific to M. pinitorqua. We correlated VRS with the amount of fungal DNA in the same leaf, and we related the findings to aspen genotype-specific parameters such as the ability to synthesize and store leaf condensed tannins (CT). At the genotype level both positive and negative relationships were observed between CTs, fungal markers, and rust infestations. However, at the population level, foliar CT concentrations correlated negatively with general fungal- and rust-specific marker abundances. Our results, therefore, do not support the use of VRS to assess Melampsora infestation in Aspen. They do, however, suggest that the relationship between European aspen and rust infestation may be characterized as autochthonous in northern Sweden.
format Article in Journal/Newspaper
author Siddique, Abu Bakar
Menke, Laura
Dinedurga, Melis
Albrectsen, Benedicte Riber
author_facet Siddique, Abu Bakar
Menke, Laura
Dinedurga, Melis
Albrectsen, Benedicte Riber
author_sort Siddique, Abu Bakar
title Molecular studies of rust on European aspen suggest an autochthonous relationship shaped by genotype
title_short Molecular studies of rust on European aspen suggest an autochthonous relationship shaped by genotype
title_full Molecular studies of rust on European aspen suggest an autochthonous relationship shaped by genotype
title_fullStr Molecular studies of rust on European aspen suggest an autochthonous relationship shaped by genotype
title_full_unstemmed Molecular studies of rust on European aspen suggest an autochthonous relationship shaped by genotype
title_sort molecular studies of rust on european aspen suggest an autochthonous relationship shaped by genotype
publisher Umeå universitet, Institutionen för fysiologisk botanik
publishDate 2023
url http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-205801
https://doi.org/10.3389/fpls.2023.1111001
genre Northern Sweden
genre_facet Northern Sweden
op_relation Frontiers in Plant Science, 2023, 14,
orcid:0000-0002-3178-523x
orcid:0000-0002-9337-4540
http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-205801
doi:10.3389/fpls.2023.1111001
ISI:000943358900001
Scopus 2-s2.0-85149620676
op_rights info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.3389/fpls.2023.1111001
container_title Frontiers in Plant Science
container_volume 14
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