Genetic diversity and differentiation in natural and managed stands of Norway spruce (Picea abies)

Being one of Sweden’s most important tree species, both as a keystone species and for the forest industry, it is important that we keep our stands of Norway spruce (Picea abies (L.) Karst.) as healthy as possible. With an unclear starting point of existing genetic diversity in natural forests we nee...

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Bibliographic Details
Main Author: Eklöf, Helena
Format: Doctoral or Postdoctoral Thesis
Language:English
Published: Umeå universitet, Institutionen för ekologi, miljö och geovetenskap 2021
Subjects:
WGS
GBS
Online Access:http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-180896
id ftumeauniv:oai:DiVA.org:umu-180896
record_format openpolar
spelling ftumeauniv:oai:DiVA.org:umu-180896 2023-10-09T21:54:38+02:00 Genetic diversity and differentiation in natural and managed stands of Norway spruce (Picea abies) Genetisk diversitet och differentiering i naturliga och förvaltade granbestånd (Picea abies) Eklöf, Helena 2021 application/pdf http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-180896 eng eng Umeå universitet, Institutionen för ekologi, miljö och geovetenskap Umeå : Umeå Universitet http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-180896 urn:isbn:978-91-7855-472-0 urn:isbn:978-91-7855-473-7 info:eu-repo/semantics/openAccess Norway spruce Picea abies forestry genetic diversity seed orchards forest management WGS GBS sequencing PoolSeq capture probes genetic differentiation Ecology Ekologi Doctoral thesis, comprehensive summary info:eu-repo/semantics/doctoralThesis text 2021 ftumeauniv 2023-09-22T13:53:35Z Being one of Sweden’s most important tree species, both as a keystone species and for the forest industry, it is important that we keep our stands of Norway spruce (Picea abies (L.) Karst.) as healthy as possible. With an unclear starting point of existing genetic diversity in natural forests we need to both evaluate what levels of natural diversity we have to begin with and how modern forestry practices might affect this. Previous studies have used relatively few markers to study this or similar situation before. We proved that both capture probes and genotyping by sequencing (GBS) show similar results in common diversity measurements and offers many SNPs, although capture probes showed slightly more diversity in the results, we choose to use PoolSeq and GBS together to examine a large number of planted and natural stands of Norwegian spruce in northern Sweden. In line with previous results on the subject we did not find any large differences between our young, planted forests and our old forests, suggesting that today’s re-planting methods have not affected the general diversity in different stands. However, we did find a difference in the variance of our summary statistics on a stand level between planted and old stands, an indicator that there is a possibility that forestry can cause long-term effects. This becomes even more important in the light of possible clonal deployment of Norway spruce. I believe that more research is needed over both larger geographical areas and with a focus on within stand variation. Using mitochondrial and chloroplast DNA to discern finer details of spatial distribution within stands and looking closer at the genotypic diversity within natural and planted stands. An effort should also be put into examine how these possible differences are affecting the rest of the ecosystem, living with and among Norway spruce. Doctoral or Postdoctoral Thesis Northern Sweden Umeå University: Publications (DiVA) Norway
institution Open Polar
collection Umeå University: Publications (DiVA)
op_collection_id ftumeauniv
language English
topic Norway spruce
Picea abies
forestry
genetic diversity
seed orchards
forest management
WGS
GBS
sequencing
PoolSeq
capture probes
genetic differentiation
Ecology
Ekologi
spellingShingle Norway spruce
Picea abies
forestry
genetic diversity
seed orchards
forest management
WGS
GBS
sequencing
PoolSeq
capture probes
genetic differentiation
Ecology
Ekologi
Eklöf, Helena
Genetic diversity and differentiation in natural and managed stands of Norway spruce (Picea abies)
topic_facet Norway spruce
Picea abies
forestry
genetic diversity
seed orchards
forest management
WGS
GBS
sequencing
PoolSeq
capture probes
genetic differentiation
Ecology
Ekologi
description Being one of Sweden’s most important tree species, both as a keystone species and for the forest industry, it is important that we keep our stands of Norway spruce (Picea abies (L.) Karst.) as healthy as possible. With an unclear starting point of existing genetic diversity in natural forests we need to both evaluate what levels of natural diversity we have to begin with and how modern forestry practices might affect this. Previous studies have used relatively few markers to study this or similar situation before. We proved that both capture probes and genotyping by sequencing (GBS) show similar results in common diversity measurements and offers many SNPs, although capture probes showed slightly more diversity in the results, we choose to use PoolSeq and GBS together to examine a large number of planted and natural stands of Norwegian spruce in northern Sweden. In line with previous results on the subject we did not find any large differences between our young, planted forests and our old forests, suggesting that today’s re-planting methods have not affected the general diversity in different stands. However, we did find a difference in the variance of our summary statistics on a stand level between planted and old stands, an indicator that there is a possibility that forestry can cause long-term effects. This becomes even more important in the light of possible clonal deployment of Norway spruce. I believe that more research is needed over both larger geographical areas and with a focus on within stand variation. Using mitochondrial and chloroplast DNA to discern finer details of spatial distribution within stands and looking closer at the genotypic diversity within natural and planted stands. An effort should also be put into examine how these possible differences are affecting the rest of the ecosystem, living with and among Norway spruce.
format Doctoral or Postdoctoral Thesis
author Eklöf, Helena
author_facet Eklöf, Helena
author_sort Eklöf, Helena
title Genetic diversity and differentiation in natural and managed stands of Norway spruce (Picea abies)
title_short Genetic diversity and differentiation in natural and managed stands of Norway spruce (Picea abies)
title_full Genetic diversity and differentiation in natural and managed stands of Norway spruce (Picea abies)
title_fullStr Genetic diversity and differentiation in natural and managed stands of Norway spruce (Picea abies)
title_full_unstemmed Genetic diversity and differentiation in natural and managed stands of Norway spruce (Picea abies)
title_sort genetic diversity and differentiation in natural and managed stands of norway spruce (picea abies)
publisher Umeå universitet, Institutionen för ekologi, miljö och geovetenskap
publishDate 2021
url http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-180896
geographic Norway
geographic_facet Norway
genre Northern Sweden
genre_facet Northern Sweden
op_relation http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-180896
urn:isbn:978-91-7855-472-0
urn:isbn:978-91-7855-473-7
op_rights info:eu-repo/semantics/openAccess
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