Abundance and biogeography of methanogenic and methanotrophic microorganisms across European streams
Aim: Although running waters are getting recognized as important methane sources, large‐scale geographical patterns of microorganisms controlling the net methane balance of streams are still unknown. Here we aim at describing community compositions of methanogenic and methanotrophic microorganisms a...
Published in: | Journal of Biogeography |
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Umeå universitet, Institutionen för idé- och samhällsstudier
2021
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Online Access: | http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-178317 https://doi.org/10.1111/jbi.14052 |
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ftumeauniv:oai:DiVA.org:umu-178317 2023-10-09T21:54:35+02:00 Abundance and biogeography of methanogenic and methanotrophic microorganisms across European streams Nagler, Magdalena Praeg, Nadine Niedrist, Georg H. Attermeyer, Katrin Catalan, Nuria Pilotto, Francesca Gutmann Roberts, Catherine Bors, Christoph Fenoglio, Stefano Colls, Miriam Cauvy-Fraunie, Sophie Doyle, Brian Romero, Ferran Machalett, Bjorn Fuss, Thomas Bednarik, Adam Klaus, Marcus Gilbert, Peter Lamonica, Dominique Nydahl, Anna C. Romero Gonzalez-Quijano, Clara Thuile Bistarelli, Lukas Kenderov, Lyubomir Piano, Elena Mor, Jordi-Rene Evtimova, Vesela DeEyto, Elvira Freixa, Anna Rulik, Martin Pegg, Josephine Herrero Ortega, Sonia Steinle, Lea Bodmer, Pascal 2021 application/pdf http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-178317 https://doi.org/10.1111/jbi.14052 eng eng Umeå universitet, Institutionen för idé- och samhällsstudier Umeå universitet, Institutionen för ekologi, miljö och geovetenskap Senckenberg Research Institute and Natural History Museum Frankfurt, Gelnhausen, Germany Journal of Biogeography, 0305-0270, 2021, 48:4, s. 947-960 orcid:0000-0002-4165-7290 orcid:0000-0003-1848-3154 orcid:0000-0003-0747-3524 http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-178317 doi:10.1111/jbi.14052 ISI:000598652500001 Scopus 2-s2.0-85097556921 info:eu-repo/semantics/openAccess inland waters methane‐ oxidizing bacteria methanogenic archaea potential methane oxidation potential methane production stream sediments Ecology Ekologi Microbiology Mikrobiologi Article in journal info:eu-repo/semantics/article text 2021 ftumeauniv https://doi.org/10.1111/jbi.14052 2023-09-22T13:57:30Z Aim: Although running waters are getting recognized as important methane sources, large‐scale geographical patterns of microorganisms controlling the net methane balance of streams are still unknown. Here we aim at describing community compositions of methanogenic and methanotrophic microorganisms at large spatial scales and at linking their abundances to potential sediment methane production (PMP) and oxidation rates (PMO). Location: The study spans across 16 European streams from northern Spain to northern Sweden and from western Ireland to western Bulgaria. Taxon: Methanogenic archaea and methane‐oxidizing microorganisms. Methods: To provide a geographical overview of both groups in a single approach, microbial communities and abundances were investigated via 16S rRNA gene sequencing, extracting relevant OTUs based on literature; both groups were quantified via quantitative PCR targeting mcrA and pmoA genes and studied in relation to environmental parameters, sediment PMP and PMO, and land use. Results: Diversity of methanogenic archaea was higher in warmer streams and of methanotrophic communities in southern sampling sites and in larger streams. Anthropogenically altered, warm and oxygen‐poor streams were dominated by the highly efficient methanogenic families Methanospirillaceae, Methanosarcinaceae and Methanobacteriaceae, but did not harbour any specific methanotrophic organisms. Contrastingly, sediment communities in colder, oxygen‐rich waters with little anthropogenic impact were characterized by methanogenic Methanosaetaceae, Methanocellaceae and Methanoflorentaceae and methanotrophic Methylococcaceae and Cd. Methanoperedens. Representatives of the methanotrophic Crenotrichaceae and Methylococcaceae as well as the methanogenic Methanoregulaceae were characteristic for environments with larger catchment area and higher discharge. PMP increased with increasing abundance of methanogenic archaea, while PMO rates did not show correlations with abundances of methane‐oxidizing bacteria. Main conclusions: ... Article in Journal/Newspaper Northern Sweden Umeå University: Publications (DiVA) Journal of Biogeography 48 4 947 960 |
institution |
Open Polar |
collection |
Umeå University: Publications (DiVA) |
op_collection_id |
ftumeauniv |
language |
English |
topic |
inland waters methane‐ oxidizing bacteria methanogenic archaea potential methane oxidation potential methane production stream sediments Ecology Ekologi Microbiology Mikrobiologi |
spellingShingle |
inland waters methane‐ oxidizing bacteria methanogenic archaea potential methane oxidation potential methane production stream sediments Ecology Ekologi Microbiology Mikrobiologi Nagler, Magdalena Praeg, Nadine Niedrist, Georg H. Attermeyer, Katrin Catalan, Nuria Pilotto, Francesca Gutmann Roberts, Catherine Bors, Christoph Fenoglio, Stefano Colls, Miriam Cauvy-Fraunie, Sophie Doyle, Brian Romero, Ferran Machalett, Bjorn Fuss, Thomas Bednarik, Adam Klaus, Marcus Gilbert, Peter Lamonica, Dominique Nydahl, Anna C. Romero Gonzalez-Quijano, Clara Thuile Bistarelli, Lukas Kenderov, Lyubomir Piano, Elena Mor, Jordi-Rene Evtimova, Vesela DeEyto, Elvira Freixa, Anna Rulik, Martin Pegg, Josephine Herrero Ortega, Sonia Steinle, Lea Bodmer, Pascal Abundance and biogeography of methanogenic and methanotrophic microorganisms across European streams |
topic_facet |
inland waters methane‐ oxidizing bacteria methanogenic archaea potential methane oxidation potential methane production stream sediments Ecology Ekologi Microbiology Mikrobiologi |
description |
Aim: Although running waters are getting recognized as important methane sources, large‐scale geographical patterns of microorganisms controlling the net methane balance of streams are still unknown. Here we aim at describing community compositions of methanogenic and methanotrophic microorganisms at large spatial scales and at linking their abundances to potential sediment methane production (PMP) and oxidation rates (PMO). Location: The study spans across 16 European streams from northern Spain to northern Sweden and from western Ireland to western Bulgaria. Taxon: Methanogenic archaea and methane‐oxidizing microorganisms. Methods: To provide a geographical overview of both groups in a single approach, microbial communities and abundances were investigated via 16S rRNA gene sequencing, extracting relevant OTUs based on literature; both groups were quantified via quantitative PCR targeting mcrA and pmoA genes and studied in relation to environmental parameters, sediment PMP and PMO, and land use. Results: Diversity of methanogenic archaea was higher in warmer streams and of methanotrophic communities in southern sampling sites and in larger streams. Anthropogenically altered, warm and oxygen‐poor streams were dominated by the highly efficient methanogenic families Methanospirillaceae, Methanosarcinaceae and Methanobacteriaceae, but did not harbour any specific methanotrophic organisms. Contrastingly, sediment communities in colder, oxygen‐rich waters with little anthropogenic impact were characterized by methanogenic Methanosaetaceae, Methanocellaceae and Methanoflorentaceae and methanotrophic Methylococcaceae and Cd. Methanoperedens. Representatives of the methanotrophic Crenotrichaceae and Methylococcaceae as well as the methanogenic Methanoregulaceae were characteristic for environments with larger catchment area and higher discharge. PMP increased with increasing abundance of methanogenic archaea, while PMO rates did not show correlations with abundances of methane‐oxidizing bacteria. Main conclusions: ... |
format |
Article in Journal/Newspaper |
author |
Nagler, Magdalena Praeg, Nadine Niedrist, Georg H. Attermeyer, Katrin Catalan, Nuria Pilotto, Francesca Gutmann Roberts, Catherine Bors, Christoph Fenoglio, Stefano Colls, Miriam Cauvy-Fraunie, Sophie Doyle, Brian Romero, Ferran Machalett, Bjorn Fuss, Thomas Bednarik, Adam Klaus, Marcus Gilbert, Peter Lamonica, Dominique Nydahl, Anna C. Romero Gonzalez-Quijano, Clara Thuile Bistarelli, Lukas Kenderov, Lyubomir Piano, Elena Mor, Jordi-Rene Evtimova, Vesela DeEyto, Elvira Freixa, Anna Rulik, Martin Pegg, Josephine Herrero Ortega, Sonia Steinle, Lea Bodmer, Pascal |
author_facet |
Nagler, Magdalena Praeg, Nadine Niedrist, Georg H. Attermeyer, Katrin Catalan, Nuria Pilotto, Francesca Gutmann Roberts, Catherine Bors, Christoph Fenoglio, Stefano Colls, Miriam Cauvy-Fraunie, Sophie Doyle, Brian Romero, Ferran Machalett, Bjorn Fuss, Thomas Bednarik, Adam Klaus, Marcus Gilbert, Peter Lamonica, Dominique Nydahl, Anna C. Romero Gonzalez-Quijano, Clara Thuile Bistarelli, Lukas Kenderov, Lyubomir Piano, Elena Mor, Jordi-Rene Evtimova, Vesela DeEyto, Elvira Freixa, Anna Rulik, Martin Pegg, Josephine Herrero Ortega, Sonia Steinle, Lea Bodmer, Pascal |
author_sort |
Nagler, Magdalena |
title |
Abundance and biogeography of methanogenic and methanotrophic microorganisms across European streams |
title_short |
Abundance and biogeography of methanogenic and methanotrophic microorganisms across European streams |
title_full |
Abundance and biogeography of methanogenic and methanotrophic microorganisms across European streams |
title_fullStr |
Abundance and biogeography of methanogenic and methanotrophic microorganisms across European streams |
title_full_unstemmed |
Abundance and biogeography of methanogenic and methanotrophic microorganisms across European streams |
title_sort |
abundance and biogeography of methanogenic and methanotrophic microorganisms across european streams |
publisher |
Umeå universitet, Institutionen för idé- och samhällsstudier |
publishDate |
2021 |
url |
http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-178317 https://doi.org/10.1111/jbi.14052 |
genre |
Northern Sweden |
genre_facet |
Northern Sweden |
op_relation |
Journal of Biogeography, 0305-0270, 2021, 48:4, s. 947-960 orcid:0000-0002-4165-7290 orcid:0000-0003-1848-3154 orcid:0000-0003-0747-3524 http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-178317 doi:10.1111/jbi.14052 ISI:000598652500001 Scopus 2-s2.0-85097556921 |
op_rights |
info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1111/jbi.14052 |
container_title |
Journal of Biogeography |
container_volume |
48 |
container_issue |
4 |
container_start_page |
947 |
op_container_end_page |
960 |
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1779318212115038208 |