An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA
Aim Current evidence from temperate studies suggests that ectomycorrhizal (ECM) fungi require overland routes for migration because of their obligate symbiotic associations with woody plants. Despite their key roles in arctic ecosystems, the phylogenetic diversity and phylogeography of arctic ECM fu...
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2012
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Online Access: | https://research.manchester.ac.uk/en/publications/8f750577-aeb1-4264-a21f-8ae2b130a3fc https://doi.org/10.1111/j.1365-2699.2011.02588.x |
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ftumanchesterpub:oai:pure.atira.dk:publications/8f750577-aeb1-4264-a21f-8ae2b130a3fc 2023-11-12T04:10:00+01:00 An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA Geml, József Timling, Ina Robinson, Clare H. Lennon, Niall Nusbaum, H. Chad Brochmann, Christian Noordeloos, Machiel E. Taylor, D. Lee 2012-01 https://research.manchester.ac.uk/en/publications/8f750577-aeb1-4264-a21f-8ae2b130a3fc https://doi.org/10.1111/j.1365-2699.2011.02588.x eng eng info:eu-repo/semantics/closedAccess Geml , J , Timling , I , Robinson , C H , Lennon , N , Nusbaum , H C , Brochmann , C , Noordeloos , M E & Taylor , D L 2012 , ' An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA ' , Journal of Biogeography , vol. 39 , no. 1 , pp. 74-88 . https://doi.org/10.1111/j.1365-2699.2011.02588.x Arctic Biodiversity Climate change Dispersal Fungi Gene flow ITS rDNA Long-distance dispersal Migration Phylogeography article 2012 ftumanchesterpub https://doi.org/10.1111/j.1365-2699.2011.02588.x 2023-10-30T09:16:03Z Aim Current evidence from temperate studies suggests that ectomycorrhizal (ECM) fungi require overland routes for migration because of their obligate symbiotic associations with woody plants. Despite their key roles in arctic ecosystems, the phylogenetic diversity and phylogeography of arctic ECM fungi remains little known. Here we assess the phylogenetic diversity of ECM communities in an isolated, formerly glaciated, high arctic archipelago, and provide explanations for their phylogeographic origins. Location Svalbard. Methods We generated and analysed internal transcribed spacer (ITS) nuclear ribosomal DNA sequences from both curated sporocarp collections (from Svalbard) and soil polymerase chain reaction (PCR) clone libraries (from Svalbard and the North American Arctic), compared these with publicly available sequences in GenBank, and estimated the phylogenetic diversity of ECM fungi in Svalbard. In addition, we conducted coalescent analyses to estimate migration rates in selected species. Results Despite Svalbard's geographic isolation and arctic climate, its ECM fungi are surprisingly diverse, with at least 72 non-singleton operational taxonomic units (soil) and 109 phylogroups (soil + sporocarp). The most species-rich genera are Thelephora/Tomentella, Cortinarius and Inocybe, followed by Hebeloma, Russula, Lactarius, Entoloma, Sebacina, Clavulina, Laccaria, Leccinum and Alnicola. Despite the scarcity of available reference data from other arctic regions, the majority of the phylogroups (73.4%) were also found outside Svalbard. At the same time, all putative Svalbard 'endemics' were newly sequenced taxa from diverse genera with massive undocumented diversity. Overall, our results support long-distance dispersal more strongly than vicariance and glacial survival. However, because of the high variation in nucleotide substitution rates among fungi, allopatric persistence since the Pliocene, although unlikely, cannot be statistically rejected. Results from the coalescent analyses suggest recent gene flow ... Article in Journal/Newspaper Arctic Arctic Archipelago Arctic biodiversity Arctic Climate change Svalbard The University of Manchester: Research Explorer Arctic Svalbard Journal of Biogeography 39 1 74 88 |
institution |
Open Polar |
collection |
The University of Manchester: Research Explorer |
op_collection_id |
ftumanchesterpub |
language |
English |
topic |
Arctic Biodiversity Climate change Dispersal Fungi Gene flow ITS rDNA Long-distance dispersal Migration Phylogeography |
spellingShingle |
Arctic Biodiversity Climate change Dispersal Fungi Gene flow ITS rDNA Long-distance dispersal Migration Phylogeography Geml, József Timling, Ina Robinson, Clare H. Lennon, Niall Nusbaum, H. Chad Brochmann, Christian Noordeloos, Machiel E. Taylor, D. Lee An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA |
topic_facet |
Arctic Biodiversity Climate change Dispersal Fungi Gene flow ITS rDNA Long-distance dispersal Migration Phylogeography |
description |
Aim Current evidence from temperate studies suggests that ectomycorrhizal (ECM) fungi require overland routes for migration because of their obligate symbiotic associations with woody plants. Despite their key roles in arctic ecosystems, the phylogenetic diversity and phylogeography of arctic ECM fungi remains little known. Here we assess the phylogenetic diversity of ECM communities in an isolated, formerly glaciated, high arctic archipelago, and provide explanations for their phylogeographic origins. Location Svalbard. Methods We generated and analysed internal transcribed spacer (ITS) nuclear ribosomal DNA sequences from both curated sporocarp collections (from Svalbard) and soil polymerase chain reaction (PCR) clone libraries (from Svalbard and the North American Arctic), compared these with publicly available sequences in GenBank, and estimated the phylogenetic diversity of ECM fungi in Svalbard. In addition, we conducted coalescent analyses to estimate migration rates in selected species. Results Despite Svalbard's geographic isolation and arctic climate, its ECM fungi are surprisingly diverse, with at least 72 non-singleton operational taxonomic units (soil) and 109 phylogroups (soil + sporocarp). The most species-rich genera are Thelephora/Tomentella, Cortinarius and Inocybe, followed by Hebeloma, Russula, Lactarius, Entoloma, Sebacina, Clavulina, Laccaria, Leccinum and Alnicola. Despite the scarcity of available reference data from other arctic regions, the majority of the phylogroups (73.4%) were also found outside Svalbard. At the same time, all putative Svalbard 'endemics' were newly sequenced taxa from diverse genera with massive undocumented diversity. Overall, our results support long-distance dispersal more strongly than vicariance and glacial survival. However, because of the high variation in nucleotide substitution rates among fungi, allopatric persistence since the Pliocene, although unlikely, cannot be statistically rejected. Results from the coalescent analyses suggest recent gene flow ... |
format |
Article in Journal/Newspaper |
author |
Geml, József Timling, Ina Robinson, Clare H. Lennon, Niall Nusbaum, H. Chad Brochmann, Christian Noordeloos, Machiel E. Taylor, D. Lee |
author_facet |
Geml, József Timling, Ina Robinson, Clare H. Lennon, Niall Nusbaum, H. Chad Brochmann, Christian Noordeloos, Machiel E. Taylor, D. Lee |
author_sort |
Geml, József |
title |
An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA |
title_short |
An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA |
title_full |
An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA |
title_fullStr |
An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA |
title_full_unstemmed |
An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA |
title_sort |
arctic community of symbiotic fungi assembled by long-distance dispersers: phylogenetic diversity of ectomycorrhizal basidiomycetes in svalbard based on soil and sporocarp dna |
publishDate |
2012 |
url |
https://research.manchester.ac.uk/en/publications/8f750577-aeb1-4264-a21f-8ae2b130a3fc https://doi.org/10.1111/j.1365-2699.2011.02588.x |
geographic |
Arctic Svalbard |
geographic_facet |
Arctic Svalbard |
genre |
Arctic Arctic Archipelago Arctic biodiversity Arctic Climate change Svalbard |
genre_facet |
Arctic Arctic Archipelago Arctic biodiversity Arctic Climate change Svalbard |
op_source |
Geml , J , Timling , I , Robinson , C H , Lennon , N , Nusbaum , H C , Brochmann , C , Noordeloos , M E & Taylor , D L 2012 , ' An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA ' , Journal of Biogeography , vol. 39 , no. 1 , pp. 74-88 . https://doi.org/10.1111/j.1365-2699.2011.02588.x |
op_rights |
info:eu-repo/semantics/closedAccess |
op_doi |
https://doi.org/10.1111/j.1365-2699.2011.02588.x |
container_title |
Journal of Biogeography |
container_volume |
39 |
container_issue |
1 |
container_start_page |
74 |
op_container_end_page |
88 |
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1782329686710288384 |