An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA

Aim Current evidence from temperate studies suggests that ectomycorrhizal (ECM) fungi require overland routes for migration because of their obligate symbiotic associations with woody plants. Despite their key roles in arctic ecosystems, the phylogenetic diversity and phylogeography of arctic ECM fu...

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Published in:Journal of Biogeography
Main Authors: Geml, József, Timling, Ina, Robinson, Clare H., Lennon, Niall, Nusbaum, H. Chad, Brochmann, Christian, Noordeloos, Machiel E., Taylor, D. Lee
Format: Article in Journal/Newspaper
Language:English
Published: 2012
Subjects:
Online Access:https://research.manchester.ac.uk/en/publications/8f750577-aeb1-4264-a21f-8ae2b130a3fc
https://doi.org/10.1111/j.1365-2699.2011.02588.x
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spelling ftumanchesterpub:oai:pure.atira.dk:publications/8f750577-aeb1-4264-a21f-8ae2b130a3fc 2023-11-12T04:10:00+01:00 An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA Geml, József Timling, Ina Robinson, Clare H. Lennon, Niall Nusbaum, H. Chad Brochmann, Christian Noordeloos, Machiel E. Taylor, D. Lee 2012-01 https://research.manchester.ac.uk/en/publications/8f750577-aeb1-4264-a21f-8ae2b130a3fc https://doi.org/10.1111/j.1365-2699.2011.02588.x eng eng info:eu-repo/semantics/closedAccess Geml , J , Timling , I , Robinson , C H , Lennon , N , Nusbaum , H C , Brochmann , C , Noordeloos , M E & Taylor , D L 2012 , ' An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA ' , Journal of Biogeography , vol. 39 , no. 1 , pp. 74-88 . https://doi.org/10.1111/j.1365-2699.2011.02588.x Arctic Biodiversity Climate change Dispersal Fungi Gene flow ITS rDNA Long-distance dispersal Migration Phylogeography article 2012 ftumanchesterpub https://doi.org/10.1111/j.1365-2699.2011.02588.x 2023-10-30T09:16:03Z Aim Current evidence from temperate studies suggests that ectomycorrhizal (ECM) fungi require overland routes for migration because of their obligate symbiotic associations with woody plants. Despite their key roles in arctic ecosystems, the phylogenetic diversity and phylogeography of arctic ECM fungi remains little known. Here we assess the phylogenetic diversity of ECM communities in an isolated, formerly glaciated, high arctic archipelago, and provide explanations for their phylogeographic origins. Location Svalbard. Methods We generated and analysed internal transcribed spacer (ITS) nuclear ribosomal DNA sequences from both curated sporocarp collections (from Svalbard) and soil polymerase chain reaction (PCR) clone libraries (from Svalbard and the North American Arctic), compared these with publicly available sequences in GenBank, and estimated the phylogenetic diversity of ECM fungi in Svalbard. In addition, we conducted coalescent analyses to estimate migration rates in selected species. Results Despite Svalbard's geographic isolation and arctic climate, its ECM fungi are surprisingly diverse, with at least 72 non-singleton operational taxonomic units (soil) and 109 phylogroups (soil + sporocarp). The most species-rich genera are Thelephora/Tomentella, Cortinarius and Inocybe, followed by Hebeloma, Russula, Lactarius, Entoloma, Sebacina, Clavulina, Laccaria, Leccinum and Alnicola. Despite the scarcity of available reference data from other arctic regions, the majority of the phylogroups (73.4%) were also found outside Svalbard. At the same time, all putative Svalbard 'endemics' were newly sequenced taxa from diverse genera with massive undocumented diversity. Overall, our results support long-distance dispersal more strongly than vicariance and glacial survival. However, because of the high variation in nucleotide substitution rates among fungi, allopatric persistence since the Pliocene, although unlikely, cannot be statistically rejected. Results from the coalescent analyses suggest recent gene flow ... Article in Journal/Newspaper Arctic Arctic Archipelago Arctic biodiversity Arctic Climate change Svalbard The University of Manchester: Research Explorer Arctic Svalbard Journal of Biogeography 39 1 74 88
institution Open Polar
collection The University of Manchester: Research Explorer
op_collection_id ftumanchesterpub
language English
topic Arctic
Biodiversity
Climate change
Dispersal
Fungi
Gene flow
ITS rDNA
Long-distance dispersal
Migration
Phylogeography
spellingShingle Arctic
Biodiversity
Climate change
Dispersal
Fungi
Gene flow
ITS rDNA
Long-distance dispersal
Migration
Phylogeography
Geml, József
Timling, Ina
Robinson, Clare H.
Lennon, Niall
Nusbaum, H. Chad
Brochmann, Christian
Noordeloos, Machiel E.
Taylor, D. Lee
An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA
topic_facet Arctic
Biodiversity
Climate change
Dispersal
Fungi
Gene flow
ITS rDNA
Long-distance dispersal
Migration
Phylogeography
description Aim Current evidence from temperate studies suggests that ectomycorrhizal (ECM) fungi require overland routes for migration because of their obligate symbiotic associations with woody plants. Despite their key roles in arctic ecosystems, the phylogenetic diversity and phylogeography of arctic ECM fungi remains little known. Here we assess the phylogenetic diversity of ECM communities in an isolated, formerly glaciated, high arctic archipelago, and provide explanations for their phylogeographic origins. Location Svalbard. Methods We generated and analysed internal transcribed spacer (ITS) nuclear ribosomal DNA sequences from both curated sporocarp collections (from Svalbard) and soil polymerase chain reaction (PCR) clone libraries (from Svalbard and the North American Arctic), compared these with publicly available sequences in GenBank, and estimated the phylogenetic diversity of ECM fungi in Svalbard. In addition, we conducted coalescent analyses to estimate migration rates in selected species. Results Despite Svalbard's geographic isolation and arctic climate, its ECM fungi are surprisingly diverse, with at least 72 non-singleton operational taxonomic units (soil) and 109 phylogroups (soil + sporocarp). The most species-rich genera are Thelephora/Tomentella, Cortinarius and Inocybe, followed by Hebeloma, Russula, Lactarius, Entoloma, Sebacina, Clavulina, Laccaria, Leccinum and Alnicola. Despite the scarcity of available reference data from other arctic regions, the majority of the phylogroups (73.4%) were also found outside Svalbard. At the same time, all putative Svalbard 'endemics' were newly sequenced taxa from diverse genera with massive undocumented diversity. Overall, our results support long-distance dispersal more strongly than vicariance and glacial survival. However, because of the high variation in nucleotide substitution rates among fungi, allopatric persistence since the Pliocene, although unlikely, cannot be statistically rejected. Results from the coalescent analyses suggest recent gene flow ...
format Article in Journal/Newspaper
author Geml, József
Timling, Ina
Robinson, Clare H.
Lennon, Niall
Nusbaum, H. Chad
Brochmann, Christian
Noordeloos, Machiel E.
Taylor, D. Lee
author_facet Geml, József
Timling, Ina
Robinson, Clare H.
Lennon, Niall
Nusbaum, H. Chad
Brochmann, Christian
Noordeloos, Machiel E.
Taylor, D. Lee
author_sort Geml, József
title An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA
title_short An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA
title_full An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA
title_fullStr An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA
title_full_unstemmed An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA
title_sort arctic community of symbiotic fungi assembled by long-distance dispersers: phylogenetic diversity of ectomycorrhizal basidiomycetes in svalbard based on soil and sporocarp dna
publishDate 2012
url https://research.manchester.ac.uk/en/publications/8f750577-aeb1-4264-a21f-8ae2b130a3fc
https://doi.org/10.1111/j.1365-2699.2011.02588.x
geographic Arctic
Svalbard
geographic_facet Arctic
Svalbard
genre Arctic
Arctic Archipelago
Arctic biodiversity
Arctic
Climate change
Svalbard
genre_facet Arctic
Arctic Archipelago
Arctic biodiversity
Arctic
Climate change
Svalbard
op_source Geml , J , Timling , I , Robinson , C H , Lennon , N , Nusbaum , H C , Brochmann , C , Noordeloos , M E & Taylor , D L 2012 , ' An arctic community of symbiotic fungi assembled by long-distance dispersers: Phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA ' , Journal of Biogeography , vol. 39 , no. 1 , pp. 74-88 . https://doi.org/10.1111/j.1365-2699.2011.02588.x
op_rights info:eu-repo/semantics/closedAccess
op_doi https://doi.org/10.1111/j.1365-2699.2011.02588.x
container_title Journal of Biogeography
container_volume 39
container_issue 1
container_start_page 74
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