Identification of multiple diagnostic SNP loci for differentiation of three salmonid species using SNP-arrays

This paper reports the use of SNP-array technology in a cross-species study for non-ambiguous species identifications. Based on an existing SNP-array for Atlantic salmon (cross)hybridisations with samples of salmon, brown trout and rainbow trout were analyzed to identify species-specific diagnostic...

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Published in:Marine Genomics
Main Authors: Drywa, Agata, Poćwierz-kotus, Anita, Dobosz, Stefan, Kent, Matthew P., Lien, Sigbjørn, Wenne, Roman
Format: Article in Journal/Newspaper
Language:English
Published: 2014
Subjects:
SNP array
Genotyping
Salmonids
Salmo
Oncorhynchus
Atlantic salmon
Online Access:https://pure.uhi.ac.uk/en/publications/cdc1d260-78d9-4cb5-91e4-fb3ccbf9c660
https://doi.org/10.1016/j.margen.2014.03.003
http://linkinghub.elsevier.com/retrieve/pii/S1874778714000294
id ftuhipublicatio:oai:pure.atira.dk:publications/cdc1d260-78d9-4cb5-91e4-fb3ccbf9c660
record_format openpolar
spelling ftuhipublicatio:oai:pure.atira.dk:publications/cdc1d260-78d9-4cb5-91e4-fb3ccbf9c660 2024-09-15T17:56:13+00:00 Identification of multiple diagnostic SNP loci for differentiation of three salmonid species using SNP-arrays Drywa, Agata Poćwierz-kotus, Anita Dobosz, Stefan Kent, Matthew P. Lien, Sigbjørn Wenne, Roman 2014-06-01 https://pure.uhi.ac.uk/en/publications/cdc1d260-78d9-4cb5-91e4-fb3ccbf9c660 https://doi.org/10.1016/j.margen.2014.03.003 http://linkinghub.elsevier.com/retrieve/pii/S1874778714000294 eng eng https://pure.uhi.ac.uk/en/publications/cdc1d260-78d9-4cb5-91e4-fb3ccbf9c660 info:eu-repo/semantics/closedAccess Drywa , A , Poćwierz-kotus , A , Dobosz , S , Kent , M P , Lien , S & Wenne , R 2014 , ' Identification of multiple diagnostic SNP loci for differentiation of three salmonid species using SNP-arrays ' , Marine Genomics , vol. 15 , pp. 5-6 . https://doi.org/10.1016/j.margen.2014.03.003 SNP array Genotyping Salmonids Salmo Oncorhynchus article 2014 ftuhipublicatio https://doi.org/10.1016/j.margen.2014.03.003 2024-07-22T23:37:24Z This paper reports the use of SNP-array technology in a cross-species study for non-ambiguous species identifications. Based on an existing SNP-array for Atlantic salmon (cross)hybridisations with samples of salmon, brown trout and rainbow trout were analyzed to identify species-specific diagnostic markers. In total 566 SNP loci were identified to be highly polymorphic across the three salmonid species providing the molecular basement for various monitoring applications in aquaculture and food industries. Article in Journal/Newspaper Atlantic salmon University of the Highlands and Islands: Research Database of UHI Marine Genomics 15 5 6
institution Open Polar
collection University of the Highlands and Islands: Research Database of UHI
op_collection_id ftuhipublicatio
language English
topic SNP array
Genotyping
Salmonids
Salmo
Oncorhynchus
spellingShingle SNP array
Genotyping
Salmonids
Salmo
Oncorhynchus
Drywa, Agata
Poćwierz-kotus, Anita
Dobosz, Stefan
Kent, Matthew P.
Lien, Sigbjørn
Wenne, Roman
Identification of multiple diagnostic SNP loci for differentiation of three salmonid species using SNP-arrays
topic_facet SNP array
Genotyping
Salmonids
Salmo
Oncorhynchus
description This paper reports the use of SNP-array technology in a cross-species study for non-ambiguous species identifications. Based on an existing SNP-array for Atlantic salmon (cross)hybridisations with samples of salmon, brown trout and rainbow trout were analyzed to identify species-specific diagnostic markers. In total 566 SNP loci were identified to be highly polymorphic across the three salmonid species providing the molecular basement for various monitoring applications in aquaculture and food industries.
format Article in Journal/Newspaper
author Drywa, Agata
Poćwierz-kotus, Anita
Dobosz, Stefan
Kent, Matthew P.
Lien, Sigbjørn
Wenne, Roman
author_facet Drywa, Agata
Poćwierz-kotus, Anita
Dobosz, Stefan
Kent, Matthew P.
Lien, Sigbjørn
Wenne, Roman
author_sort Drywa, Agata
title Identification of multiple diagnostic SNP loci for differentiation of three salmonid species using SNP-arrays
title_short Identification of multiple diagnostic SNP loci for differentiation of three salmonid species using SNP-arrays
title_full Identification of multiple diagnostic SNP loci for differentiation of three salmonid species using SNP-arrays
title_fullStr Identification of multiple diagnostic SNP loci for differentiation of three salmonid species using SNP-arrays
title_full_unstemmed Identification of multiple diagnostic SNP loci for differentiation of three salmonid species using SNP-arrays
title_sort identification of multiple diagnostic snp loci for differentiation of three salmonid species using snp-arrays
publishDate 2014
url https://pure.uhi.ac.uk/en/publications/cdc1d260-78d9-4cb5-91e4-fb3ccbf9c660
https://doi.org/10.1016/j.margen.2014.03.003
http://linkinghub.elsevier.com/retrieve/pii/S1874778714000294
genre Atlantic salmon
genre_facet Atlantic salmon
op_source Drywa , A , Poćwierz-kotus , A , Dobosz , S , Kent , M P , Lien , S & Wenne , R 2014 , ' Identification of multiple diagnostic SNP loci for differentiation of three salmonid species using SNP-arrays ' , Marine Genomics , vol. 15 , pp. 5-6 . https://doi.org/10.1016/j.margen.2014.03.003
op_relation https://pure.uhi.ac.uk/en/publications/cdc1d260-78d9-4cb5-91e4-fb3ccbf9c660
op_rights info:eu-repo/semantics/closedAccess
op_doi https://doi.org/10.1016/j.margen.2014.03.003
container_title Marine Genomics
container_volume 15
container_start_page 5
op_container_end_page 6
_version_ 1810432426406576128

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