Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real time PCR
The heterotrophic dinoflagellate Pfiesteria piscicida was detected in Ace Lake in the Vestfold Hills, eastern Antarctica by using real-time PCR based on 18S rDNA sequences. Antarctic water samples collected in 2004 were tested by species-specific real-time PCR assays for the identification of P. pis...
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Language: | English |
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2007
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Online Access: | https://pure.uhi.ac.uk/en/publications/8d108468-975a-4a25-9687-5038d63594e2 https://doi.org/10.1007/s00300-006-0244-0 |
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ftuhipublicatio:oai:pure.atira.dk:publications/8d108468-975a-4a25-9687-5038d63594e2 2024-01-28T10:00:55+01:00 Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real time PCR Park, Tae- Gyu Bell, Elanor M Pearce, Imogen Rublee, P A Bolch, Chris J S Hallegraeff, G M 2007 https://pure.uhi.ac.uk/en/publications/8d108468-975a-4a25-9687-5038d63594e2 https://doi.org/10.1007/s00300-006-0244-0 eng eng info:eu-repo/semantics/restrictedAccess Park , T G , Bell , E M , Pearce , I , Rublee , P A , Bolch , C J S & Hallegraeff , G M 2007 , ' Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real time PCR ' , POLAR BIOL , no. 0 , pp. 843-848 . https://doi.org/10.1007/s00300-006-0244-0 article 2007 ftuhipublicatio https://doi.org/10.1007/s00300-006-0244-0 2024-01-04T23:20:33Z The heterotrophic dinoflagellate Pfiesteria piscicida was detected in Ace Lake in the Vestfold Hills, eastern Antarctica by using real-time PCR based on 18S rDNA sequences. Antarctic water samples collected in 2004 were tested by species-specific real-time PCR assays for the identification of P. piscicida and P. shumwayae. Positive results were shown with P. piscicida-specific real-time PCR, and PCR products were examined by sequence analysis for confirmation. A phylogenetic tree made from partial 18S rDNA sequences showed that the Antarctic clone clustered with P. piscicida. This result suggests that P. piscicida is present in the extreme conditions of an Antarctic saline lake which has not contained fish for thousands of years. Article in Journal/Newspaper Antarc* Antarctic Antarctica University of the Highlands and Islands: Research Database of UHI Ace Lake ENVELOPE(78.188,78.188,-68.472,-68.472) Antarctic Saline Lake ENVELOPE(-111.528,-111.528,57.081,57.081) The Antarctic Vestfold Vestfold Hills Polar Biology 30 7 843 848 |
institution |
Open Polar |
collection |
University of the Highlands and Islands: Research Database of UHI |
op_collection_id |
ftuhipublicatio |
language |
English |
description |
The heterotrophic dinoflagellate Pfiesteria piscicida was detected in Ace Lake in the Vestfold Hills, eastern Antarctica by using real-time PCR based on 18S rDNA sequences. Antarctic water samples collected in 2004 were tested by species-specific real-time PCR assays for the identification of P. piscicida and P. shumwayae. Positive results were shown with P. piscicida-specific real-time PCR, and PCR products were examined by sequence analysis for confirmation. A phylogenetic tree made from partial 18S rDNA sequences showed that the Antarctic clone clustered with P. piscicida. This result suggests that P. piscicida is present in the extreme conditions of an Antarctic saline lake which has not contained fish for thousands of years. |
format |
Article in Journal/Newspaper |
author |
Park, Tae- Gyu Bell, Elanor M Pearce, Imogen Rublee, P A Bolch, Chris J S Hallegraeff, G M |
spellingShingle |
Park, Tae- Gyu Bell, Elanor M Pearce, Imogen Rublee, P A Bolch, Chris J S Hallegraeff, G M Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real time PCR |
author_facet |
Park, Tae- Gyu Bell, Elanor M Pearce, Imogen Rublee, P A Bolch, Chris J S Hallegraeff, G M |
author_sort |
Park, Tae- Gyu |
title |
Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real time PCR |
title_short |
Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real time PCR |
title_full |
Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real time PCR |
title_fullStr |
Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real time PCR |
title_full_unstemmed |
Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real time PCR |
title_sort |
detection of a novel ecotype of pfiesteria piscicida (dinophyceae) in an antarctic saline lake by real time pcr |
publishDate |
2007 |
url |
https://pure.uhi.ac.uk/en/publications/8d108468-975a-4a25-9687-5038d63594e2 https://doi.org/10.1007/s00300-006-0244-0 |
long_lat |
ENVELOPE(78.188,78.188,-68.472,-68.472) ENVELOPE(-111.528,-111.528,57.081,57.081) |
geographic |
Ace Lake Antarctic Saline Lake The Antarctic Vestfold Vestfold Hills |
geographic_facet |
Ace Lake Antarctic Saline Lake The Antarctic Vestfold Vestfold Hills |
genre |
Antarc* Antarctic Antarctica |
genre_facet |
Antarc* Antarctic Antarctica |
op_source |
Park , T G , Bell , E M , Pearce , I , Rublee , P A , Bolch , C J S & Hallegraeff , G M 2007 , ' Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real time PCR ' , POLAR BIOL , no. 0 , pp. 843-848 . https://doi.org/10.1007/s00300-006-0244-0 |
op_rights |
info:eu-repo/semantics/restrictedAccess |
op_doi |
https://doi.org/10.1007/s00300-006-0244-0 |
container_title |
Polar Biology |
container_volume |
30 |
container_issue |
7 |
container_start_page |
843 |
op_container_end_page |
848 |
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1789325524679524352 |