Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions

Identifying the lacustrine haptophyte species that produce long-chain alkenones (LCAs) is essential prior to down-core temperature reconstructions. Here, we investigated the identity of LCA-producing species from Lake Toyoni, Japan using 18S ribosomal DNA (rDNA) and organic geochemical analyses. The...

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Published in:Organic Geochemistry
Main Authors: Plancq, Julien, McColl, Jill L., Bendle, James A., Seki, Osamu, Couto, Jillian M., Henderson, Andrew C.G., Yamashita, Youhei, Kawamura, Kimitaka, Toney, Jaime L.
Format: Article in Journal/Newspaper
Language:English
Published: Elsevier 2018
Subjects:
Online Access:http://eprints.gla.ac.uk/169200/
http://eprints.gla.ac.uk/169200/1/169200.pdf
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spelling ftuglasgow:oai:eprints.gla.ac.uk:169200 2023-05-15T16:26:14+02:00 Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions Plancq, Julien McColl, Jill L. Bendle, James A. Seki, Osamu Couto, Jillian M. Henderson, Andrew C.G. Yamashita, Youhei Kawamura, Kimitaka Toney, Jaime L. 2018-11 text http://eprints.gla.ac.uk/169200/ http://eprints.gla.ac.uk/169200/1/169200.pdf en eng Elsevier http://eprints.gla.ac.uk/169200/1/169200.pdf Plancq, J. <http://eprints.gla.ac.uk/view/author/34598.html> , McColl, J. L., Bendle, J. A., Seki, O., Couto, J. M., Henderson, A. C.G., Yamashita, Y., Kawamura, K. and Toney, J. L. <http://eprints.gla.ac.uk/view/author/16493.html> (2018) Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions. Organic Geochemistry <http://eprints.gla.ac.uk/view/journal_volume/Organic_Geochemistry.html>, 125, pp. 189-195. (doi:10.1016/j.orggeochem.2018.09.011 <http://dx.doi.org/10.1016/j.orggeochem.2018.09.011>) cc_by_4 CC-BY Articles PeerReviewed 2018 ftuglasgow https://doi.org/10.1016/j.orggeochem.2018.09.011 2020-05-28T22:23:34Z Identifying the lacustrine haptophyte species that produce long-chain alkenones (LCAs) is essential prior to down-core temperature reconstructions. Here, we investigated the identity of LCA-producing species from Lake Toyoni, Japan using 18S ribosomal DNA (rDNA) and organic geochemical analyses. The rDNA analyses identified eighteen operational taxonomic units (OTUs) of which only one fell within the haptophyte phylotype. This haptophyte belongs to the Group I phylotype, as supported by the LCA distribution found in surface and down-core sediments, and is closely related to a haptophyte found in Lake BrayaSø (Greenland). The inferred temperature using the Greenland calibration is very close to the Lake Toyoni surface temperature recorded during the spring/early summer season, when the LCA-producing haptophyte is likely to bloom. We therefore suggest that the temperature calibration from the Lake BrayaSø, Greenland is a suitable calibration for down-core temperature reconstructions at Lake Toyoni. Article in Journal/Newspaper Greenland University of Glasgow: Enlighten - Publications Greenland Organic Geochemistry 125 189 195
institution Open Polar
collection University of Glasgow: Enlighten - Publications
op_collection_id ftuglasgow
language English
description Identifying the lacustrine haptophyte species that produce long-chain alkenones (LCAs) is essential prior to down-core temperature reconstructions. Here, we investigated the identity of LCA-producing species from Lake Toyoni, Japan using 18S ribosomal DNA (rDNA) and organic geochemical analyses. The rDNA analyses identified eighteen operational taxonomic units (OTUs) of which only one fell within the haptophyte phylotype. This haptophyte belongs to the Group I phylotype, as supported by the LCA distribution found in surface and down-core sediments, and is closely related to a haptophyte found in Lake BrayaSø (Greenland). The inferred temperature using the Greenland calibration is very close to the Lake Toyoni surface temperature recorded during the spring/early summer season, when the LCA-producing haptophyte is likely to bloom. We therefore suggest that the temperature calibration from the Lake BrayaSø, Greenland is a suitable calibration for down-core temperature reconstructions at Lake Toyoni.
format Article in Journal/Newspaper
author Plancq, Julien
McColl, Jill L.
Bendle, James A.
Seki, Osamu
Couto, Jillian M.
Henderson, Andrew C.G.
Yamashita, Youhei
Kawamura, Kimitaka
Toney, Jaime L.
spellingShingle Plancq, Julien
McColl, Jill L.
Bendle, James A.
Seki, Osamu
Couto, Jillian M.
Henderson, Andrew C.G.
Yamashita, Youhei
Kawamura, Kimitaka
Toney, Jaime L.
Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions
author_facet Plancq, Julien
McColl, Jill L.
Bendle, James A.
Seki, Osamu
Couto, Jillian M.
Henderson, Andrew C.G.
Yamashita, Youhei
Kawamura, Kimitaka
Toney, Jaime L.
author_sort Plancq, Julien
title Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions
title_short Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions
title_full Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions
title_fullStr Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions
title_full_unstemmed Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions
title_sort genomic identification of the long-chain alkenone producer in freshwater lake toyoni, japan: implications for temperature reconstructions
publisher Elsevier
publishDate 2018
url http://eprints.gla.ac.uk/169200/
http://eprints.gla.ac.uk/169200/1/169200.pdf
geographic Greenland
geographic_facet Greenland
genre Greenland
genre_facet Greenland
op_relation http://eprints.gla.ac.uk/169200/1/169200.pdf
Plancq, J. <http://eprints.gla.ac.uk/view/author/34598.html> , McColl, J. L., Bendle, J. A., Seki, O., Couto, J. M., Henderson, A. C.G., Yamashita, Y., Kawamura, K. and Toney, J. L. <http://eprints.gla.ac.uk/view/author/16493.html> (2018) Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions. Organic Geochemistry <http://eprints.gla.ac.uk/view/journal_volume/Organic_Geochemistry.html>, 125, pp. 189-195. (doi:10.1016/j.orggeochem.2018.09.011 <http://dx.doi.org/10.1016/j.orggeochem.2018.09.011>)
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op_doi https://doi.org/10.1016/j.orggeochem.2018.09.011
container_title Organic Geochemistry
container_volume 125
container_start_page 189
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