The biogeography of the atlantic salmon (Salmo salar) gut microbiome
Although understood in many vertebrate systems, the natural diversity of host-associated microbiota has been little studied in teleosts. For migratory fishes, successful exploitation of multiple habitats may affect and be affected by the composition of the intestinal microbiome. We collected 96 Salm...
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ftuglasgow:oai:eprints.gla.ac.uk:110560 2023-05-15T15:32:07+02:00 The biogeography of the atlantic salmon (Salmo salar) gut microbiome Llewellyn, Martin S. McGinnity, Philip Dionne, Melanie Letourneau, Justine Thonier, Florian Carvalho, Gary R. Creer, Simon Derome, Nicolas 2015 text http://eprints.gla.ac.uk/110560/ http://eprints.gla.ac.uk/110560/1/110560.pdf en eng Nature Publishing Group http://eprints.gla.ac.uk/110560/1/110560.pdf Llewellyn, M. S. <http://eprints.gla.ac.uk/view/author/34669.html> , McGinnity, P., Dionne, M., Letourneau, J., Thonier, F., Carvalho, G. R., Creer, S. and Derome, N. (2015) The biogeography of the atlantic salmon (Salmo salar) gut microbiome. ISME Journal <http://eprints.gla.ac.uk/view/journal_volume/ISME_Journal.html>, 10, pp. 1280-1284. (doi:10.1038/ismej.2015.189 <http://dx.doi.org/10.1038/ismej.2015.189>) (PMID:26517698) Articles PeerReviewed 2015 ftuglasgow https://doi.org/10.1038/ismej.2015.189 2022-01-20T23:13:03Z Although understood in many vertebrate systems, the natural diversity of host-associated microbiota has been little studied in teleosts. For migratory fishes, successful exploitation of multiple habitats may affect and be affected by the composition of the intestinal microbiome. We collected 96 Salmo salar from across the Atlantic encompassing both freshwater and marine phases. Dramatic differences between environmental and gut bacterial communities were observed. Furthermore, community composition was not significantly impacted by geography. Instead life-cycle stage strongly defined both the diversity and identity of microbial assemblages in the gut, with evidence for community destabilisation in migratory phases. Mycoplasmataceae phylotypes were abundantly recovered in all life-cycle stages. Patterns of Mycoplasmataceae phylotype recruitment to the intestinal microbial community among sites and life-cycle stages support a dual role for deterministic and stochastic processes in defining the composition of the S. salar gut microbiome. Article in Journal/Newspaper Atlantic salmon Salmo salar University of Glasgow: Enlighten - Publications The ISME Journal 10 5 1280 1284 |
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University of Glasgow: Enlighten - Publications |
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ftuglasgow |
language |
English |
description |
Although understood in many vertebrate systems, the natural diversity of host-associated microbiota has been little studied in teleosts. For migratory fishes, successful exploitation of multiple habitats may affect and be affected by the composition of the intestinal microbiome. We collected 96 Salmo salar from across the Atlantic encompassing both freshwater and marine phases. Dramatic differences between environmental and gut bacterial communities were observed. Furthermore, community composition was not significantly impacted by geography. Instead life-cycle stage strongly defined both the diversity and identity of microbial assemblages in the gut, with evidence for community destabilisation in migratory phases. Mycoplasmataceae phylotypes were abundantly recovered in all life-cycle stages. Patterns of Mycoplasmataceae phylotype recruitment to the intestinal microbial community among sites and life-cycle stages support a dual role for deterministic and stochastic processes in defining the composition of the S. salar gut microbiome. |
format |
Article in Journal/Newspaper |
author |
Llewellyn, Martin S. McGinnity, Philip Dionne, Melanie Letourneau, Justine Thonier, Florian Carvalho, Gary R. Creer, Simon Derome, Nicolas |
spellingShingle |
Llewellyn, Martin S. McGinnity, Philip Dionne, Melanie Letourneau, Justine Thonier, Florian Carvalho, Gary R. Creer, Simon Derome, Nicolas The biogeography of the atlantic salmon (Salmo salar) gut microbiome |
author_facet |
Llewellyn, Martin S. McGinnity, Philip Dionne, Melanie Letourneau, Justine Thonier, Florian Carvalho, Gary R. Creer, Simon Derome, Nicolas |
author_sort |
Llewellyn, Martin S. |
title |
The biogeography of the atlantic salmon (Salmo salar) gut microbiome |
title_short |
The biogeography of the atlantic salmon (Salmo salar) gut microbiome |
title_full |
The biogeography of the atlantic salmon (Salmo salar) gut microbiome |
title_fullStr |
The biogeography of the atlantic salmon (Salmo salar) gut microbiome |
title_full_unstemmed |
The biogeography of the atlantic salmon (Salmo salar) gut microbiome |
title_sort |
biogeography of the atlantic salmon (salmo salar) gut microbiome |
publisher |
Nature Publishing Group |
publishDate |
2015 |
url |
http://eprints.gla.ac.uk/110560/ http://eprints.gla.ac.uk/110560/1/110560.pdf |
genre |
Atlantic salmon Salmo salar |
genre_facet |
Atlantic salmon Salmo salar |
op_relation |
http://eprints.gla.ac.uk/110560/1/110560.pdf Llewellyn, M. S. <http://eprints.gla.ac.uk/view/author/34669.html> , McGinnity, P., Dionne, M., Letourneau, J., Thonier, F., Carvalho, G. R., Creer, S. and Derome, N. (2015) The biogeography of the atlantic salmon (Salmo salar) gut microbiome. ISME Journal <http://eprints.gla.ac.uk/view/journal_volume/ISME_Journal.html>, 10, pp. 1280-1284. (doi:10.1038/ismej.2015.189 <http://dx.doi.org/10.1038/ismej.2015.189>) (PMID:26517698) |
op_doi |
https://doi.org/10.1038/ismej.2015.189 |
container_title |
The ISME Journal |
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10 |
container_issue |
5 |
container_start_page |
1280 |
op_container_end_page |
1284 |
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1766362619623505920 |