Signatures of the Evolution of Parthenogenesis and Cryptobiosis in the Genomes of Panagrolaimid Nematodes

Most animal species reproduce sexually and fully parthenogenetic lineages are usually short lived in evolution. Still, parthenogenesis may be advantageous as it avoids the cost of sex and permits colonization by single individuals. Panagrolaimid nematodes have colonized environments ranging from ari...

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Main Authors: Schiffer, PH, Danchin, EGJ, Burnell, AM, Creevey, CJ, Wong, S, Dix, I, O'Mahony, G, Culleton, BA, Rancurel, C, Stier, G, Martínez-Salazar, EA, Marconi, A, Trivedi, U, Kroiher, M, Thorne, MAS, Schierenberg, E, Wiehe, T, Blaxter, M
Format: Article in Journal/Newspaper
Language:English
Published: 2019
Subjects:
Online Access:https://discovery.ucl.ac.uk/id/eprint/10086607/1/Schiffer_Signatures%20of%20the%20Evolution%20of%20Parthenogenesis%20and%20Cryptobiosis%20in%20the%20Genomes%20of%20Panagrolaimid%20Nematodes_VoR.pdf
https://discovery.ucl.ac.uk/id/eprint/10086607/
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spelling ftucl:oai:eprints.ucl.ac.uk.OAI2:10086607 2023-12-24T10:11:21+01:00 Signatures of the Evolution of Parthenogenesis and Cryptobiosis in the Genomes of Panagrolaimid Nematodes Schiffer, PH Danchin, EGJ Burnell, AM Creevey, CJ Wong, S Dix, I O'Mahony, G Culleton, BA Rancurel, C Stier, G Martínez-Salazar, EA Marconi, A Trivedi, U Kroiher, M Thorne, MAS Schierenberg, E Wiehe, T Blaxter, M 2019-11-22 text https://discovery.ucl.ac.uk/id/eprint/10086607/1/Schiffer_Signatures%20of%20the%20Evolution%20of%20Parthenogenesis%20and%20Cryptobiosis%20in%20the%20Genomes%20of%20Panagrolaimid%20Nematodes_VoR.pdf https://discovery.ucl.ac.uk/id/eprint/10086607/ eng eng https://discovery.ucl.ac.uk/id/eprint/10086607/1/Schiffer_Signatures%20of%20the%20Evolution%20of%20Parthenogenesis%20and%20Cryptobiosis%20in%20the%20Genomes%20of%20Panagrolaimid%20Nematodes_VoR.pdf https://discovery.ucl.ac.uk/id/eprint/10086607/ open iScience , 21 pp. 587-602. (2019) Evolutionary Biology Phylogenetics Transcriptomics Article 2019 ftucl 2023-11-27T13:07:39Z Most animal species reproduce sexually and fully parthenogenetic lineages are usually short lived in evolution. Still, parthenogenesis may be advantageous as it avoids the cost of sex and permits colonization by single individuals. Panagrolaimid nematodes have colonized environments ranging from arid deserts to Arctic and Antarctic biomes. Many are obligatory meiotic parthenogens, and most have cryptobiotic abilities, being able to survive repeated cycles of complete desiccation and freezing. To identify systems that may contribute to these striking abilities, we sequenced and compared the genomes and transcriptomes of parthenogenetic and outcrossing panagrolaimid species, including cryptobionts and non-cryptobionts. The parthenogens are triploids, most likely originating through hybridization. Adaptation to cryptobiosis shaped the genomes of panagrolaimid nematodes and is associated with the expansion of gene families and signatures of selection on genes involved in cryptobiosis. All panagrolaimids have acquired genes through horizontal gene transfer, some of which are likely to contribute to cryptobiosis. Article in Journal/Newspaper Antarc* Antarctic Arctic University College London: UCL Discovery Arctic Antarctic
institution Open Polar
collection University College London: UCL Discovery
op_collection_id ftucl
language English
topic Evolutionary Biology
Phylogenetics
Transcriptomics
spellingShingle Evolutionary Biology
Phylogenetics
Transcriptomics
Schiffer, PH
Danchin, EGJ
Burnell, AM
Creevey, CJ
Wong, S
Dix, I
O'Mahony, G
Culleton, BA
Rancurel, C
Stier, G
Martínez-Salazar, EA
Marconi, A
Trivedi, U
Kroiher, M
Thorne, MAS
Schierenberg, E
Wiehe, T
Blaxter, M
Signatures of the Evolution of Parthenogenesis and Cryptobiosis in the Genomes of Panagrolaimid Nematodes
topic_facet Evolutionary Biology
Phylogenetics
Transcriptomics
description Most animal species reproduce sexually and fully parthenogenetic lineages are usually short lived in evolution. Still, parthenogenesis may be advantageous as it avoids the cost of sex and permits colonization by single individuals. Panagrolaimid nematodes have colonized environments ranging from arid deserts to Arctic and Antarctic biomes. Many are obligatory meiotic parthenogens, and most have cryptobiotic abilities, being able to survive repeated cycles of complete desiccation and freezing. To identify systems that may contribute to these striking abilities, we sequenced and compared the genomes and transcriptomes of parthenogenetic and outcrossing panagrolaimid species, including cryptobionts and non-cryptobionts. The parthenogens are triploids, most likely originating through hybridization. Adaptation to cryptobiosis shaped the genomes of panagrolaimid nematodes and is associated with the expansion of gene families and signatures of selection on genes involved in cryptobiosis. All panagrolaimids have acquired genes through horizontal gene transfer, some of which are likely to contribute to cryptobiosis.
format Article in Journal/Newspaper
author Schiffer, PH
Danchin, EGJ
Burnell, AM
Creevey, CJ
Wong, S
Dix, I
O'Mahony, G
Culleton, BA
Rancurel, C
Stier, G
Martínez-Salazar, EA
Marconi, A
Trivedi, U
Kroiher, M
Thorne, MAS
Schierenberg, E
Wiehe, T
Blaxter, M
author_facet Schiffer, PH
Danchin, EGJ
Burnell, AM
Creevey, CJ
Wong, S
Dix, I
O'Mahony, G
Culleton, BA
Rancurel, C
Stier, G
Martínez-Salazar, EA
Marconi, A
Trivedi, U
Kroiher, M
Thorne, MAS
Schierenberg, E
Wiehe, T
Blaxter, M
author_sort Schiffer, PH
title Signatures of the Evolution of Parthenogenesis and Cryptobiosis in the Genomes of Panagrolaimid Nematodes
title_short Signatures of the Evolution of Parthenogenesis and Cryptobiosis in the Genomes of Panagrolaimid Nematodes
title_full Signatures of the Evolution of Parthenogenesis and Cryptobiosis in the Genomes of Panagrolaimid Nematodes
title_fullStr Signatures of the Evolution of Parthenogenesis and Cryptobiosis in the Genomes of Panagrolaimid Nematodes
title_full_unstemmed Signatures of the Evolution of Parthenogenesis and Cryptobiosis in the Genomes of Panagrolaimid Nematodes
title_sort signatures of the evolution of parthenogenesis and cryptobiosis in the genomes of panagrolaimid nematodes
publishDate 2019
url https://discovery.ucl.ac.uk/id/eprint/10086607/1/Schiffer_Signatures%20of%20the%20Evolution%20of%20Parthenogenesis%20and%20Cryptobiosis%20in%20the%20Genomes%20of%20Panagrolaimid%20Nematodes_VoR.pdf
https://discovery.ucl.ac.uk/id/eprint/10086607/
geographic Arctic
Antarctic
geographic_facet Arctic
Antarctic
genre Antarc*
Antarctic
Arctic
genre_facet Antarc*
Antarctic
Arctic
op_source iScience , 21 pp. 587-602. (2019)
op_relation https://discovery.ucl.ac.uk/id/eprint/10086607/1/Schiffer_Signatures%20of%20the%20Evolution%20of%20Parthenogenesis%20and%20Cryptobiosis%20in%20the%20Genomes%20of%20Panagrolaimid%20Nematodes_VoR.pdf
https://discovery.ucl.ac.uk/id/eprint/10086607/
op_rights open
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