Diversity and abundance of microbial eukaryotes in stream sediments from Svalbard

Microbial eukaryotes are increasingly being recognised for their role in global biogeochemical cycles, yet very few studies have focussed on their distribution in high-latitude stream sediments, an important habitat which influences stream water nutrient chemistry. In this study, we present the firs...

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Published in:Polar Biology
Main Authors: Hindshaw, R. S., Lindsay, M. R., Boyd, E. S.
Format: Article in Journal/Newspaper
Language:English
Published: Springer 2016
Subjects:
Online Access:http://eprints.esc.cam.ac.uk/3964/
http://eprints.esc.cam.ac.uk/3964/1/art%253A10.1007%252Fs00300-017-2106-3.pdf
https://link.springer.com/article/10.1007/s00300-017-2106-3
https://doi.org/10.1007/s00300-017-2106-3
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spelling ftucambridgeesc:oai:eprints.esc.cam.ac.uk:3964 2023-05-15T16:22:16+02:00 Diversity and abundance of microbial eukaryotes in stream sediments from Svalbard Hindshaw, R. S. Lindsay, M. R. Boyd, E. S. 2016 text http://eprints.esc.cam.ac.uk/3964/ http://eprints.esc.cam.ac.uk/3964/1/art%253A10.1007%252Fs00300-017-2106-3.pdf https://link.springer.com/article/10.1007/s00300-017-2106-3 https://doi.org/10.1007/s00300-017-2106-3 en eng Springer http://eprints.esc.cam.ac.uk/3964/1/art%253A10.1007%252Fs00300-017-2106-3.pdf Hindshaw, R. S. and Lindsay, M. R. and Boyd, E. S. (2016) Diversity and abundance of microbial eukaryotes in stream sediments from Svalbard. Polar Biology. ISSN 0722-4060 (print version) ISSN: 1432-2056 (electronic version) DOI https://doi.org/10.1007/s00300-017-2106-3 <https://doi.org/10.1007/s00300-017-2106-3> 01 - Climate Change and Earth-Ocean Atmosphere Systems Article PeerReviewed 2016 ftucambridgeesc https://doi.org/10.1007/s00300-017-2106-3 2020-08-27T18:09:52Z Microbial eukaryotes are increasingly being recognised for their role in global biogeochemical cycles, yet very few studies have focussed on their distribution in high-latitude stream sediments, an important habitat which influences stream water nutrient chemistry. In this study, we present the first comparison of microbial eukaryotes from two different polar habitats by determining the abundance and taxonomic affiliation of 18S rRNA gene fragments recovered from four sediment samples in Svalbard: two from a glaciated catchment and two from an unglaciated permafrost-dominated catchment. Whilst there was no difference between the two catchments in terms of Rao’s phylogenetic diversity (0.18±0.04, 1SD), the glaciated catchment samples had slightly higher richness (138–139) than the unglaciated catchment samples (67–106). At the phylum level, Ciliophora had the highest relative abundance in the samples from the glaciated catchment (32–63%), but only comprised 0–17% of the unglaciated catchment samples. Bacillariophyta was the most abundant phylum in one of the samples from the unglaciated catchment (43%) but phototrophic microbial eukaryotes only formed a minor component of the glaciated catchment samples (<2%), suggesting that in these environments the microbial eukaryotes are predominantly heterotrophic (chemotrophic). This is in contrast to previously published data from Robertson Glacier, Canada where the relative abundance of chlorophyta (phototrophs) in three samples was 48–57%. The contrast may be due to differences in glacial hydrology and/or geology, highlighting the variation in microbial eukaryote communities between nominally similar environments. Article in Journal/Newspaper glacier glacier* permafrost Polar Biology Svalbard University of Cambridge, Department of Earth Sciences: ESC Publications Canada Robertson Glacier ENVELOPE(165.383,165.383,-71.050,-71.050) Svalbard Polar Biology 40 9 1835 1843
institution Open Polar
collection University of Cambridge, Department of Earth Sciences: ESC Publications
op_collection_id ftucambridgeesc
language English
topic 01 - Climate Change and Earth-Ocean Atmosphere Systems
spellingShingle 01 - Climate Change and Earth-Ocean Atmosphere Systems
Hindshaw, R. S.
Lindsay, M. R.
Boyd, E. S.
Diversity and abundance of microbial eukaryotes in stream sediments from Svalbard
topic_facet 01 - Climate Change and Earth-Ocean Atmosphere Systems
description Microbial eukaryotes are increasingly being recognised for their role in global biogeochemical cycles, yet very few studies have focussed on their distribution in high-latitude stream sediments, an important habitat which influences stream water nutrient chemistry. In this study, we present the first comparison of microbial eukaryotes from two different polar habitats by determining the abundance and taxonomic affiliation of 18S rRNA gene fragments recovered from four sediment samples in Svalbard: two from a glaciated catchment and two from an unglaciated permafrost-dominated catchment. Whilst there was no difference between the two catchments in terms of Rao’s phylogenetic diversity (0.18±0.04, 1SD), the glaciated catchment samples had slightly higher richness (138–139) than the unglaciated catchment samples (67–106). At the phylum level, Ciliophora had the highest relative abundance in the samples from the glaciated catchment (32–63%), but only comprised 0–17% of the unglaciated catchment samples. Bacillariophyta was the most abundant phylum in one of the samples from the unglaciated catchment (43%) but phototrophic microbial eukaryotes only formed a minor component of the glaciated catchment samples (<2%), suggesting that in these environments the microbial eukaryotes are predominantly heterotrophic (chemotrophic). This is in contrast to previously published data from Robertson Glacier, Canada where the relative abundance of chlorophyta (phototrophs) in three samples was 48–57%. The contrast may be due to differences in glacial hydrology and/or geology, highlighting the variation in microbial eukaryote communities between nominally similar environments.
format Article in Journal/Newspaper
author Hindshaw, R. S.
Lindsay, M. R.
Boyd, E. S.
author_facet Hindshaw, R. S.
Lindsay, M. R.
Boyd, E. S.
author_sort Hindshaw, R. S.
title Diversity and abundance of microbial eukaryotes in stream sediments from Svalbard
title_short Diversity and abundance of microbial eukaryotes in stream sediments from Svalbard
title_full Diversity and abundance of microbial eukaryotes in stream sediments from Svalbard
title_fullStr Diversity and abundance of microbial eukaryotes in stream sediments from Svalbard
title_full_unstemmed Diversity and abundance of microbial eukaryotes in stream sediments from Svalbard
title_sort diversity and abundance of microbial eukaryotes in stream sediments from svalbard
publisher Springer
publishDate 2016
url http://eprints.esc.cam.ac.uk/3964/
http://eprints.esc.cam.ac.uk/3964/1/art%253A10.1007%252Fs00300-017-2106-3.pdf
https://link.springer.com/article/10.1007/s00300-017-2106-3
https://doi.org/10.1007/s00300-017-2106-3
long_lat ENVELOPE(165.383,165.383,-71.050,-71.050)
geographic Canada
Robertson Glacier
Svalbard
geographic_facet Canada
Robertson Glacier
Svalbard
genre glacier
glacier*
permafrost
Polar Biology
Svalbard
genre_facet glacier
glacier*
permafrost
Polar Biology
Svalbard
op_relation http://eprints.esc.cam.ac.uk/3964/1/art%253A10.1007%252Fs00300-017-2106-3.pdf
Hindshaw, R. S. and Lindsay, M. R. and Boyd, E. S. (2016) Diversity and abundance of microbial eukaryotes in stream sediments from Svalbard. Polar Biology. ISSN 0722-4060 (print version) ISSN: 1432-2056 (electronic version) DOI https://doi.org/10.1007/s00300-017-2106-3 <https://doi.org/10.1007/s00300-017-2106-3>
op_doi https://doi.org/10.1007/s00300-017-2106-3
container_title Polar Biology
container_volume 40
container_issue 9
container_start_page 1835
op_container_end_page 1843
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