Data from: Temporal patterns of genetic variation in a salmon population undergoing rapid change in migration timing
Though genetic diversity is necessary for population persistence in rapidly changing environments, little is known about how climate-warming influences patterns of intra-population genetic variation. For a pink salmon population experiencing increasing temperatures, we used temporal genetic data (mi...
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Online Access: | https://doi.org/10.5061/dryad.p2m22 |
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fttriple:oai:gotriple.eu:50|dedup_wf_001::c7305f574e45e8bb273e0cc357030dda 2023-05-15T17:59:41+02:00 Data from: Temporal patterns of genetic variation in a salmon population undergoing rapid change in migration timing Kovach, Ryan P. Gharrett, Anthony J. Tallmon, David A. 2020-06-26 https://doi.org/10.5061/dryad.p2m22 en eng Dryad http://dx.doi.org/10.5061/dryad.p2m22 https://dx.doi.org/10.5061/dryad.p2m22 lic_creative-commons 10.5061/dryad.p2m22 oai:services.nod.dans.knaw.nl:Products/dans:oai:easy.dans.knaw.nl:easy-dataset:83191 oai:easy.dans.knaw.nl:easy-dataset:83191 10|openaire____::9e3be59865b2c1c335d32dae2fe7b254 10|re3data_____::94816e6421eeb072e7742ce6a9decc5f re3data_____::r3d100000044 10|eurocrisdris::fe4903425d9040f680d8610d9079ea14 10|re3data_____::84e123776089ce3c7a33db98d9cd15a8 10|openaire____::081b82f96300b6a6e3d282bad31cb6e2 10|opendoar____::8b6dd7db9af49e67306feb59a8bdc52c salmon Genetic divergence genetic effective population size Oncorhychus gorbuscha genetic change Climate Change phenology genetic diversity Alaska Life sciences medicine and health care envir demo Dataset https://vocabularies.coar-repositories.org/resource_types/c_ddb1/ 2020 fttriple https://doi.org/10.5061/dryad.p2m22 2023-01-22T16:53:39Z Though genetic diversity is necessary for population persistence in rapidly changing environments, little is known about how climate-warming influences patterns of intra-population genetic variation. For a pink salmon population experiencing increasing temperatures, we used temporal genetic data (microsatellite = 1993, 2001, 2009; allozyme = 1979, 1981, 1983) to quantify the genetic effective population size (Ne) and genetic divergence due to differences in migration timing and to estimate whether these quantities have changed over time. We predicted that temporal trends toward earlier migration timing and a corresponding loss of phenotypic variation would decrease genetic divergence based on migration timing and Ne. We observed significant genetic divergence based on migration timing and genetic heterogeneity between early- and late-migrating fish. There was also some evidence for divergent selection between early- and late-migrating fish at circadian rhythm genes, but results varied over time. Estimates of Ne from multiple methods were large (>1200) and Ne/Nc generally exceeded 0.2. Despite shifts in migration timing and loss of phenotypic variation, there was no evidence for changes in within-population genetic divergence or Ne over the course of this study. These results suggest that in instances of population stability, genetic diversity may be resistant to climate-induced changes in migration timing. Data_For_Kovachetal2013_EvolAppsThis file contains the data used in "Temporal patterns of genetic variation in a salmon population undergoing rapid change in migration timing". The data are organized based on the methods used to analyze them and year. The first three sheets are the data used for estimating the effective population size - the files are in ONeSAMP format. The next three files are the data sets used to test for autocorrelation (GENALEX) and population structure (STRUCTURE) - the files are in GENALEX format. The next sheet "Allozymes" contains the raw allele frequency data that were used to ... Dataset Pink salmon Alaska Unknown |
institution |
Open Polar |
collection |
Unknown |
op_collection_id |
fttriple |
language |
English |
topic |
salmon Genetic divergence genetic effective population size Oncorhychus gorbuscha genetic change Climate Change phenology genetic diversity Alaska Life sciences medicine and health care envir demo |
spellingShingle |
salmon Genetic divergence genetic effective population size Oncorhychus gorbuscha genetic change Climate Change phenology genetic diversity Alaska Life sciences medicine and health care envir demo Kovach, Ryan P. Gharrett, Anthony J. Tallmon, David A. Data from: Temporal patterns of genetic variation in a salmon population undergoing rapid change in migration timing |
topic_facet |
salmon Genetic divergence genetic effective population size Oncorhychus gorbuscha genetic change Climate Change phenology genetic diversity Alaska Life sciences medicine and health care envir demo |
description |
Though genetic diversity is necessary for population persistence in rapidly changing environments, little is known about how climate-warming influences patterns of intra-population genetic variation. For a pink salmon population experiencing increasing temperatures, we used temporal genetic data (microsatellite = 1993, 2001, 2009; allozyme = 1979, 1981, 1983) to quantify the genetic effective population size (Ne) and genetic divergence due to differences in migration timing and to estimate whether these quantities have changed over time. We predicted that temporal trends toward earlier migration timing and a corresponding loss of phenotypic variation would decrease genetic divergence based on migration timing and Ne. We observed significant genetic divergence based on migration timing and genetic heterogeneity between early- and late-migrating fish. There was also some evidence for divergent selection between early- and late-migrating fish at circadian rhythm genes, but results varied over time. Estimates of Ne from multiple methods were large (>1200) and Ne/Nc generally exceeded 0.2. Despite shifts in migration timing and loss of phenotypic variation, there was no evidence for changes in within-population genetic divergence or Ne over the course of this study. These results suggest that in instances of population stability, genetic diversity may be resistant to climate-induced changes in migration timing. Data_For_Kovachetal2013_EvolAppsThis file contains the data used in "Temporal patterns of genetic variation in a salmon population undergoing rapid change in migration timing". The data are organized based on the methods used to analyze them and year. The first three sheets are the data used for estimating the effective population size - the files are in ONeSAMP format. The next three files are the data sets used to test for autocorrelation (GENALEX) and population structure (STRUCTURE) - the files are in GENALEX format. The next sheet "Allozymes" contains the raw allele frequency data that were used to ... |
format |
Dataset |
author |
Kovach, Ryan P. Gharrett, Anthony J. Tallmon, David A. |
author_facet |
Kovach, Ryan P. Gharrett, Anthony J. Tallmon, David A. |
author_sort |
Kovach, Ryan P. |
title |
Data from: Temporal patterns of genetic variation in a salmon population undergoing rapid change in migration timing |
title_short |
Data from: Temporal patterns of genetic variation in a salmon population undergoing rapid change in migration timing |
title_full |
Data from: Temporal patterns of genetic variation in a salmon population undergoing rapid change in migration timing |
title_fullStr |
Data from: Temporal patterns of genetic variation in a salmon population undergoing rapid change in migration timing |
title_full_unstemmed |
Data from: Temporal patterns of genetic variation in a salmon population undergoing rapid change in migration timing |
title_sort |
data from: temporal patterns of genetic variation in a salmon population undergoing rapid change in migration timing |
publisher |
Dryad |
publishDate |
2020 |
url |
https://doi.org/10.5061/dryad.p2m22 |
genre |
Pink salmon Alaska |
genre_facet |
Pink salmon Alaska |
op_source |
10.5061/dryad.p2m22 oai:services.nod.dans.knaw.nl:Products/dans:oai:easy.dans.knaw.nl:easy-dataset:83191 oai:easy.dans.knaw.nl:easy-dataset:83191 10|openaire____::9e3be59865b2c1c335d32dae2fe7b254 10|re3data_____::94816e6421eeb072e7742ce6a9decc5f re3data_____::r3d100000044 10|eurocrisdris::fe4903425d9040f680d8610d9079ea14 10|re3data_____::84e123776089ce3c7a33db98d9cd15a8 10|openaire____::081b82f96300b6a6e3d282bad31cb6e2 10|opendoar____::8b6dd7db9af49e67306feb59a8bdc52c |
op_relation |
http://dx.doi.org/10.5061/dryad.p2m22 https://dx.doi.org/10.5061/dryad.p2m22 |
op_rights |
lic_creative-commons |
op_doi |
https://doi.org/10.5061/dryad.p2m22 |
_version_ |
1766168536271552512 |