Data from: Richards’s equation and nonlinear mixed models applied to avian growth: why use them?

Postnatal growth is an important life-history trait that varies widely across avian species, and several equations with a sigmoidal shape have been used to model it. Classical three-parameter models have an inflection point fixed at a percentage of the upper asymptote which could be an unrealistic a...

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Main Authors: Svagelj, Walter S., Laich, Agustina Gómez, Quintana, Flavio
Format: Dataset
Language:English
Published: Dryad 2018
Subjects:
psy
Online Access:https://doi.org/10.5061/dryad.s448n5d
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spelling fttriple:oai:gotriple.eu:50|dedup_wf_001::9dce9194b5a3e6f214a639ce33a7f00a 2023-05-15T16:53:41+02:00 Data from: Richards’s equation and nonlinear mixed models applied to avian growth: why use them? Svagelj, Walter S. Laich, Agustina Gómez Quintana, Flavio 2018-01-01 https://doi.org/10.5061/dryad.s448n5d en eng Dryad http://dx.doi.org/10.5061/dryad.s448n5d https://dx.doi.org/10.5061/dryad.s448n5d lic_creative-commons 10.5061/dryad.s448n5d oai:easy.dans.knaw.nl:easy-dataset:119246 oai:services.nod.dans.knaw.nl:Products/dans:oai:easy.dans.knaw.nl:easy-dataset:119246 10|openaire____::9e3be59865b2c1c335d32dae2fe7b254 10|re3data_____::94816e6421eeb072e7742ce6a9decc5f re3data_____::r3d100000044 10|re3data_____::84e123776089ce3c7a33db98d9cd15a8 10|eurocrisdris::fe4903425d9040f680d8610d9079ea14 random effects Phalacrocorax atriceps grouped data females maximum growth rate Growth models nonlinear mixed models growth data asymptotic size Life sciences medicine and health care envir psy Dataset https://vocabularies.coar-repositories.org/resource_types/c_ddb1/ 2018 fttriple https://doi.org/10.5061/dryad.s448n5d 2023-01-22T16:51:23Z Postnatal growth is an important life-history trait that varies widely across avian species, and several equations with a sigmoidal shape have been used to model it. Classical three-parameter models have an inflection point fixed at a percentage of the upper asymptote which could be an unrealistic assumption generating biased fits. The Richards model emerged as an interesting alternative because it includes an extra parameter that determines the location of the inflection point which can move freely along the growth curve. Recently, nonlinear mixed models (NLMM) have been used in modeling avian growth because these models can deal with a lack of independence among data as typically occurs with multiple measurements on the same individual or on groups of related individuals. Here, we evaluated the usefulness of von Bertalanffy, Gompertz, logistic, U4 and Richards’s equations modeling chick growth in the Imperial Shag (Phalacrocorax atriceps). We modelled growth in commonly used morphological traits, including body mass, bill length, head length and tarsus length, and compared the performance of models by using NLMM. Estimated adult size, age at maximum growth and maximum growth rates markedly differed across models. Overall, the most consistent performance in estimated adult size was obtained by the Richards model that showed deviations from mean adult size within 5%. Based on AICc values, the Richards equation was the best model for all traits analyzed. For tarsus length, both Richards and U4 models provided indistinguishable fits because the relative inflection value estimated from the Richards model was very close to that assumed by the U4 model. Our results highlight the bias incurred by three-parameter models when the assumed inflection placement deviates from that derived from data. Thus, the application of the Richards equation using the NLMM framework represents a flexible and powerful tool for the analysis of avian growth. Morphological measurements of female chicks of the Imperial ShagMorphological ... Dataset Imperial Shag Phalacrocorax atriceps Unknown
institution Open Polar
collection Unknown
op_collection_id fttriple
language English
topic random effects
Phalacrocorax atriceps
grouped data
females
maximum growth rate
Growth models
nonlinear mixed models
growth data
asymptotic size
Life sciences
medicine and health care
envir
psy
spellingShingle random effects
Phalacrocorax atriceps
grouped data
females
maximum growth rate
Growth models
nonlinear mixed models
growth data
asymptotic size
Life sciences
medicine and health care
envir
psy
Svagelj, Walter S.
Laich, Agustina Gómez
Quintana, Flavio
Data from: Richards’s equation and nonlinear mixed models applied to avian growth: why use them?
topic_facet random effects
Phalacrocorax atriceps
grouped data
females
maximum growth rate
Growth models
nonlinear mixed models
growth data
asymptotic size
Life sciences
medicine and health care
envir
psy
description Postnatal growth is an important life-history trait that varies widely across avian species, and several equations with a sigmoidal shape have been used to model it. Classical three-parameter models have an inflection point fixed at a percentage of the upper asymptote which could be an unrealistic assumption generating biased fits. The Richards model emerged as an interesting alternative because it includes an extra parameter that determines the location of the inflection point which can move freely along the growth curve. Recently, nonlinear mixed models (NLMM) have been used in modeling avian growth because these models can deal with a lack of independence among data as typically occurs with multiple measurements on the same individual or on groups of related individuals. Here, we evaluated the usefulness of von Bertalanffy, Gompertz, logistic, U4 and Richards’s equations modeling chick growth in the Imperial Shag (Phalacrocorax atriceps). We modelled growth in commonly used morphological traits, including body mass, bill length, head length and tarsus length, and compared the performance of models by using NLMM. Estimated adult size, age at maximum growth and maximum growth rates markedly differed across models. Overall, the most consistent performance in estimated adult size was obtained by the Richards model that showed deviations from mean adult size within 5%. Based on AICc values, the Richards equation was the best model for all traits analyzed. For tarsus length, both Richards and U4 models provided indistinguishable fits because the relative inflection value estimated from the Richards model was very close to that assumed by the U4 model. Our results highlight the bias incurred by three-parameter models when the assumed inflection placement deviates from that derived from data. Thus, the application of the Richards equation using the NLMM framework represents a flexible and powerful tool for the analysis of avian growth. Morphological measurements of female chicks of the Imperial ShagMorphological ...
format Dataset
author Svagelj, Walter S.
Laich, Agustina Gómez
Quintana, Flavio
author_facet Svagelj, Walter S.
Laich, Agustina Gómez
Quintana, Flavio
author_sort Svagelj, Walter S.
title Data from: Richards’s equation and nonlinear mixed models applied to avian growth: why use them?
title_short Data from: Richards’s equation and nonlinear mixed models applied to avian growth: why use them?
title_full Data from: Richards’s equation and nonlinear mixed models applied to avian growth: why use them?
title_fullStr Data from: Richards’s equation and nonlinear mixed models applied to avian growth: why use them?
title_full_unstemmed Data from: Richards’s equation and nonlinear mixed models applied to avian growth: why use them?
title_sort data from: richards’s equation and nonlinear mixed models applied to avian growth: why use them?
publisher Dryad
publishDate 2018
url https://doi.org/10.5061/dryad.s448n5d
genre Imperial Shag
Phalacrocorax atriceps
genre_facet Imperial Shag
Phalacrocorax atriceps
op_source 10.5061/dryad.s448n5d
oai:easy.dans.knaw.nl:easy-dataset:119246
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10|re3data_____::84e123776089ce3c7a33db98d9cd15a8
10|eurocrisdris::fe4903425d9040f680d8610d9079ea14
op_relation http://dx.doi.org/10.5061/dryad.s448n5d
https://dx.doi.org/10.5061/dryad.s448n5d
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op_doi https://doi.org/10.5061/dryad.s448n5d
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