Data from: Transcriptomic responses of the calanoid copepod Calanus finmarchicus to the saxitoxin producing dinoflagellate Alexandrium fundyense
In the Gulf of Maine, the copepod Calanus finmarchicus co-occurs with the neurotoxin-producing dinoflagellate, Alexandrium fundyense. The copepod is resistant to this toxic alga, but little is known about other effects. Gene expression profiles were used to investigate the physiological response of...
Main Authors: | , , |
---|---|
Format: | Dataset |
Language: | unknown |
Published: |
Dryad
2017
|
Subjects: | |
Online Access: | https://doi.org/10.5061/dryad.11978 |
id |
fttriple:oai:gotriple.eu:50|dedup_wf_001::8ebf5205f140fc9e91f18a1f12bee8b3 |
---|---|
record_format |
openpolar |
spelling |
fttriple:oai:gotriple.eu:50|dedup_wf_001::8ebf5205f140fc9e91f18a1f12bee8b3 2023-05-15T15:47:51+02:00 Data from: Transcriptomic responses of the calanoid copepod Calanus finmarchicus to the saxitoxin producing dinoflagellate Alexandrium fundyense Roncalli, Vittoria Cieslak, Matthew C. Lenz, Petra H. 2017-03-31 https://doi.org/10.5061/dryad.11978 undefined unknown Dryad https://dx.doi.org/10.5061/dryad.11978 http://dx.doi.org/10.5061/dryad.11978 lic_creative-commons 10.5061/dryad.11978 oai:services.nod.dans.knaw.nl:Products/dans:oai:easy.dans.knaw.nl:easy-dataset:93827 oai:easy.dans.knaw.nl:easy-dataset:93827 10|openaire____::9e3be59865b2c1c335d32dae2fe7b254 re3data_____::r3d100000044 10|re3data_____::94816e6421eeb072e7742ce6a9decc5f 10|eurocrisdris::fe4903425d9040f680d8610d9079ea14 10|re3data_____::84e123776089ce3c7a33db98d9cd15a8 10|openaire____::081b82f96300b6a6e3d282bad31cb6e2 10|opendoar____::8b6dd7db9af49e67306feb59a8bdc52c Calanus finmarchcius Alexandrium fundyense cellular stress response detoxification gene expression sub-optimal conditions Gulf of Maine United States of America Life sciences medicine and health care envir socio Dataset https://vocabularies.coar-repositories.org/resource_types/c_ddb1/ 2017 fttriple https://doi.org/10.5061/dryad.11978 2023-01-22T16:51:26Z In the Gulf of Maine, the copepod Calanus finmarchicus co-occurs with the neurotoxin-producing dinoflagellate, Alexandrium fundyense. The copepod is resistant to this toxic alga, but little is known about other effects. Gene expression profiles were used to investigate the physiological response of females feeding for two and five days on a control diet or a diet containing either a low or a high dose of A. fundyense. The physiological responses to the two experimental diets were similar, but changed between the time points. At 5-days the response was characterized by down-regulated genes involved in energy metabolism. Detoxification was not a major component of the response. Instead, genes involved in digestion were consistently regulated, suggesting that food assimilation may have been affected. Thus, predicted increases in the frequency of blooms of A. fundyense could affect C. finmarchicus populations by changing the individuals’ energy budget and reducing their ability to build lipid reserves. 2dayCvsLDList of up- and down-regulated genes in Calanus finmarchicus adult females feeding on the low dose (LD) treatment of Alexandrium fundyense for 2 days compared with the control diet Rhodomonas spp. For each gene NCBI Accession No., fold change (absolute) and annotation (blastx) are listed.2dayCvsHDList of up- and down-regulated genes in Calanus finmarchicus adult females feeding on the high dose (HD) treatment of Alexandrium fundyense for 2 days compared with the control diet Rhodomonas spp. For each gene NCBI Accession No., fold change (absolute) and annotation (blastx) are listed.5dayCvsLDList of up- and down-regulated genes in Calanus finmarchicus adult females feeding on the low dose (LD) treatment of Alexandrium fundyense for 5 days compared with the control diet Rhodomonas spp. For each gene NCBI Accession No., fold change (absolute) and annotation (blastx) are listed.5dayCvsHDList of up- and down-regulated genes in Calanus finmarchicus adult females feeding on the high dose (HD) treatment of Alexandrium ... Dataset Calanus finmarchicus Unknown |
institution |
Open Polar |
collection |
Unknown |
op_collection_id |
fttriple |
language |
unknown |
topic |
Calanus finmarchcius Alexandrium fundyense cellular stress response detoxification gene expression sub-optimal conditions Gulf of Maine United States of America Life sciences medicine and health care envir socio |
spellingShingle |
Calanus finmarchcius Alexandrium fundyense cellular stress response detoxification gene expression sub-optimal conditions Gulf of Maine United States of America Life sciences medicine and health care envir socio Roncalli, Vittoria Cieslak, Matthew C. Lenz, Petra H. Data from: Transcriptomic responses of the calanoid copepod Calanus finmarchicus to the saxitoxin producing dinoflagellate Alexandrium fundyense |
topic_facet |
Calanus finmarchcius Alexandrium fundyense cellular stress response detoxification gene expression sub-optimal conditions Gulf of Maine United States of America Life sciences medicine and health care envir socio |
description |
In the Gulf of Maine, the copepod Calanus finmarchicus co-occurs with the neurotoxin-producing dinoflagellate, Alexandrium fundyense. The copepod is resistant to this toxic alga, but little is known about other effects. Gene expression profiles were used to investigate the physiological response of females feeding for two and five days on a control diet or a diet containing either a low or a high dose of A. fundyense. The physiological responses to the two experimental diets were similar, but changed between the time points. At 5-days the response was characterized by down-regulated genes involved in energy metabolism. Detoxification was not a major component of the response. Instead, genes involved in digestion were consistently regulated, suggesting that food assimilation may have been affected. Thus, predicted increases in the frequency of blooms of A. fundyense could affect C. finmarchicus populations by changing the individuals’ energy budget and reducing their ability to build lipid reserves. 2dayCvsLDList of up- and down-regulated genes in Calanus finmarchicus adult females feeding on the low dose (LD) treatment of Alexandrium fundyense for 2 days compared with the control diet Rhodomonas spp. For each gene NCBI Accession No., fold change (absolute) and annotation (blastx) are listed.2dayCvsHDList of up- and down-regulated genes in Calanus finmarchicus adult females feeding on the high dose (HD) treatment of Alexandrium fundyense for 2 days compared with the control diet Rhodomonas spp. For each gene NCBI Accession No., fold change (absolute) and annotation (blastx) are listed.5dayCvsLDList of up- and down-regulated genes in Calanus finmarchicus adult females feeding on the low dose (LD) treatment of Alexandrium fundyense for 5 days compared with the control diet Rhodomonas spp. For each gene NCBI Accession No., fold change (absolute) and annotation (blastx) are listed.5dayCvsHDList of up- and down-regulated genes in Calanus finmarchicus adult females feeding on the high dose (HD) treatment of Alexandrium ... |
format |
Dataset |
author |
Roncalli, Vittoria Cieslak, Matthew C. Lenz, Petra H. |
author_facet |
Roncalli, Vittoria Cieslak, Matthew C. Lenz, Petra H. |
author_sort |
Roncalli, Vittoria |
title |
Data from: Transcriptomic responses of the calanoid copepod Calanus finmarchicus to the saxitoxin producing dinoflagellate Alexandrium fundyense |
title_short |
Data from: Transcriptomic responses of the calanoid copepod Calanus finmarchicus to the saxitoxin producing dinoflagellate Alexandrium fundyense |
title_full |
Data from: Transcriptomic responses of the calanoid copepod Calanus finmarchicus to the saxitoxin producing dinoflagellate Alexandrium fundyense |
title_fullStr |
Data from: Transcriptomic responses of the calanoid copepod Calanus finmarchicus to the saxitoxin producing dinoflagellate Alexandrium fundyense |
title_full_unstemmed |
Data from: Transcriptomic responses of the calanoid copepod Calanus finmarchicus to the saxitoxin producing dinoflagellate Alexandrium fundyense |
title_sort |
data from: transcriptomic responses of the calanoid copepod calanus finmarchicus to the saxitoxin producing dinoflagellate alexandrium fundyense |
publisher |
Dryad |
publishDate |
2017 |
url |
https://doi.org/10.5061/dryad.11978 |
genre |
Calanus finmarchicus |
genre_facet |
Calanus finmarchicus |
op_source |
10.5061/dryad.11978 oai:services.nod.dans.knaw.nl:Products/dans:oai:easy.dans.knaw.nl:easy-dataset:93827 oai:easy.dans.knaw.nl:easy-dataset:93827 10|openaire____::9e3be59865b2c1c335d32dae2fe7b254 re3data_____::r3d100000044 10|re3data_____::94816e6421eeb072e7742ce6a9decc5f 10|eurocrisdris::fe4903425d9040f680d8610d9079ea14 10|re3data_____::84e123776089ce3c7a33db98d9cd15a8 10|openaire____::081b82f96300b6a6e3d282bad31cb6e2 10|opendoar____::8b6dd7db9af49e67306feb59a8bdc52c |
op_relation |
https://dx.doi.org/10.5061/dryad.11978 http://dx.doi.org/10.5061/dryad.11978 |
op_rights |
lic_creative-commons |
op_doi |
https://doi.org/10.5061/dryad.11978 |
_version_ |
1766382796131008512 |