Data from: Delimiting shades of gray: phylogeography of the Northern Fulmar, Fulmarus glacialis

The Northern Fulmar (Fulmarus glacialis) is a common tube-nosed seabird with a disjunct Holarctic range. Taxonomic divisions within the Northern Fulmar have historically been muddled by geographical variation notably including highly polymorphic plumage. Recent molecular analyses (i.e., DNA barcodin...

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Bibliographic Details
Main Authors: Kerr, Kevin C. R., Dove, Carla J.
Format: Dataset
Language:unknown
Published: 2013
Subjects:
Online Access:https://doi.org/10.5061/dryad.0520f
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spelling fttriple:oai:gotriple.eu:50|dedup_wf_001::760db39df4f9f117598c143c86dd4296 2023-05-15T14:04:00+02:00 Data from: Delimiting shades of gray: phylogeography of the Northern Fulmar, Fulmarus glacialis Kerr, Kevin C. R. Dove, Carla J. 2013-05-22 https://doi.org/10.5061/dryad.0520f undefined unknown http://dx.doi.org/10.5061/dryad.0520f https://dx.doi.org/10.5061/dryad.0520f lic_creative-commons oai:services.nod.dans.knaw.nl:Products/dans:oai:easy.dans.knaw.nl:easy-dataset:83467 10.5061/dryad.0520f oai:easy.dans.knaw.nl:easy-dataset:83467 10|eurocrisdris::fe4903425d9040f680d8610d9079ea14 10|openaire____::9e3be59865b2c1c335d32dae2fe7b254 10|re3data_____::94816e6421eeb072e7742ce6a9decc5f 10|re3data_____::84e123776089ce3c7a33db98d9cd15a8 re3data_____::r3d100000044 10|openaire____::081b82f96300b6a6e3d282bad31cb6e2 10|opendoar____::8b6dd7db9af49e67306feb59a8bdc52c Life sciences medicine and health care polymorphism DNA barcodes Pliocene MC1R Fulmarus glacialis Pacific Pagodroma nivea Thalassoica antarctica Fulmarus glacialoides Miocene Atlantic Pleistocene Arctic Holarctic Pacific Ocean Atlantic Ocean envir anthro-se Dataset https://vocabularies.coar-repositories.org/resource_types/c_ddb1/ 2013 fttriple https://doi.org/10.5061/dryad.0520f 2023-01-22T17:15:36Z The Northern Fulmar (Fulmarus glacialis) is a common tube-nosed seabird with a disjunct Holarctic range. Taxonomic divisions within the Northern Fulmar have historically been muddled by geographical variation notably including highly polymorphic plumage. Recent molecular analyses (i.e., DNA barcoding) have suggested that genetic divergence between Atlantic and Pacific populations could be on par with those typically observed between species. We employ a multigene phylogenetic analysis to better explore the level of genetic divergence between these populations and to test an old hypothesis on the origin of the modern distribution of color morphs across their range. Additionally, we test whether mutations in the melanocortin-1 receptor gene (MC1R) are associated with dark plumage in the Northern Fulmar. We confirmed that mitochondrial lineages in the Atlantic and Pacific populations are highly divergent, but nuclear markers revealed incomplete lineage sorting. Genetic divergence between these populations is consistent with that observed between many species of Procellariiformes and we recommend elevating these two forms to separate species. We also find that MC1R variation is not associated with color morph but rather is better explained by geographical divergence. Fulmarini_PhasedNuclearHaplotypesMultiple sequence alignment of melanocortin-1 receptor (MC1R) and myoglobin intron II (MYOII) DNA sequences from Fulmarus glacialis and closely allied species. Sequences were phased either: i) in silico using the program PHASE version 2.1, or ii) via cloning using the TOPO TA Cloning kit (Invitrogen). The file is in NEXUS format. Dataset Antarc* Antarctica Arctic Fulmarus glacialis Northern Fulmar Thalassoica antarctica Unknown Arctic Pacific Fulmar ENVELOPE(-46.016,-46.016,-60.616,-60.616) Nivea ENVELOPE(-45.479,-45.479,-60.580,-60.580)
institution Open Polar
collection Unknown
op_collection_id fttriple
language unknown
topic Life sciences
medicine and health care
polymorphism
DNA barcodes
Pliocene
MC1R
Fulmarus glacialis
Pacific
Pagodroma nivea
Thalassoica antarctica
Fulmarus glacialoides
Miocene
Atlantic
Pleistocene
Arctic
Holarctic
Pacific Ocean
Atlantic Ocean
envir
anthro-se
spellingShingle Life sciences
medicine and health care
polymorphism
DNA barcodes
Pliocene
MC1R
Fulmarus glacialis
Pacific
Pagodroma nivea
Thalassoica antarctica
Fulmarus glacialoides
Miocene
Atlantic
Pleistocene
Arctic
Holarctic
Pacific Ocean
Atlantic Ocean
envir
anthro-se
Kerr, Kevin C. R.
Dove, Carla J.
Data from: Delimiting shades of gray: phylogeography of the Northern Fulmar, Fulmarus glacialis
topic_facet Life sciences
medicine and health care
polymorphism
DNA barcodes
Pliocene
MC1R
Fulmarus glacialis
Pacific
Pagodroma nivea
Thalassoica antarctica
Fulmarus glacialoides
Miocene
Atlantic
Pleistocene
Arctic
Holarctic
Pacific Ocean
Atlantic Ocean
envir
anthro-se
description The Northern Fulmar (Fulmarus glacialis) is a common tube-nosed seabird with a disjunct Holarctic range. Taxonomic divisions within the Northern Fulmar have historically been muddled by geographical variation notably including highly polymorphic plumage. Recent molecular analyses (i.e., DNA barcoding) have suggested that genetic divergence between Atlantic and Pacific populations could be on par with those typically observed between species. We employ a multigene phylogenetic analysis to better explore the level of genetic divergence between these populations and to test an old hypothesis on the origin of the modern distribution of color morphs across their range. Additionally, we test whether mutations in the melanocortin-1 receptor gene (MC1R) are associated with dark plumage in the Northern Fulmar. We confirmed that mitochondrial lineages in the Atlantic and Pacific populations are highly divergent, but nuclear markers revealed incomplete lineage sorting. Genetic divergence between these populations is consistent with that observed between many species of Procellariiformes and we recommend elevating these two forms to separate species. We also find that MC1R variation is not associated with color morph but rather is better explained by geographical divergence. Fulmarini_PhasedNuclearHaplotypesMultiple sequence alignment of melanocortin-1 receptor (MC1R) and myoglobin intron II (MYOII) DNA sequences from Fulmarus glacialis and closely allied species. Sequences were phased either: i) in silico using the program PHASE version 2.1, or ii) via cloning using the TOPO TA Cloning kit (Invitrogen). The file is in NEXUS format.
format Dataset
author Kerr, Kevin C. R.
Dove, Carla J.
author_facet Kerr, Kevin C. R.
Dove, Carla J.
author_sort Kerr, Kevin C. R.
title Data from: Delimiting shades of gray: phylogeography of the Northern Fulmar, Fulmarus glacialis
title_short Data from: Delimiting shades of gray: phylogeography of the Northern Fulmar, Fulmarus glacialis
title_full Data from: Delimiting shades of gray: phylogeography of the Northern Fulmar, Fulmarus glacialis
title_fullStr Data from: Delimiting shades of gray: phylogeography of the Northern Fulmar, Fulmarus glacialis
title_full_unstemmed Data from: Delimiting shades of gray: phylogeography of the Northern Fulmar, Fulmarus glacialis
title_sort data from: delimiting shades of gray: phylogeography of the northern fulmar, fulmarus glacialis
publishDate 2013
url https://doi.org/10.5061/dryad.0520f
long_lat ENVELOPE(-46.016,-46.016,-60.616,-60.616)
ENVELOPE(-45.479,-45.479,-60.580,-60.580)
geographic Arctic
Pacific
Fulmar
Nivea
geographic_facet Arctic
Pacific
Fulmar
Nivea
genre Antarc*
Antarctica
Arctic
Fulmarus glacialis
Northern Fulmar
Thalassoica antarctica
genre_facet Antarc*
Antarctica
Arctic
Fulmarus glacialis
Northern Fulmar
Thalassoica antarctica
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