Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea)
BACKGROUND: The shrimp Nematocarcinus lanceopes Bate, 1888 is found in the deep sea around Antarctica and sub-Antarctic islands. Previous studies on mitochondrial data and species distribution models provided evidence for a homogenous circum-Antarctic population of N. lanceopes. However, to analyze...
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Online Access: | https://doi.org/10.5061/dryad.gg3rn |
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fttriple:oai:gotriple.eu:50|dedup_wf_001::73778d7a9de1def1e8e67c52e9fee043 2023-05-15T13:52:10+02:00 Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) Dambach, Johannes Raupach, Michael J. Mayer, Christoph Schwarzer, Julia Leese, Florian 2013-01-01 https://doi.org/10.5061/dryad.gg3rn undefined unknown http://dx.doi.org/10.5061/dryad.gg3rn https://dx.doi.org/10.5061/dryad.gg3rn lic_creative-commons oai:services.nod.dans.knaw.nl:Products/dans:oai:easy.dans.knaw.nl:easy-dataset:83134 10.5061/dryad.gg3rn oai:easy.dans.knaw.nl:easy-dataset:83134 10|eurocrisdris::fe4903425d9040f680d8610d9079ea14 10|openaire____::9e3be59865b2c1c335d32dae2fe7b254 10|re3data_____::94816e6421eeb072e7742ce6a9decc5f re3data_____::r3d100000044 10|re3data_____::84e123776089ce3c7a33db98d9cd15a8 10|openaire____::081b82f96300b6a6e3d282bad31cb6e2 10|opendoar____::8b6dd7db9af49e67306feb59a8bdc52c Life sciences medicine and health care microsatellites Deep sea Southern Ocean Antarctic Nematocarcinus lanceopes Antarctica geo envir Dataset https://vocabularies.coar-repositories.org/resource_types/c_ddb1/ 2013 fttriple https://doi.org/10.5061/dryad.gg3rn 2023-01-22T17:22:33Z BACKGROUND: The shrimp Nematocarcinus lanceopes Bate, 1888 is found in the deep sea around Antarctica and sub-Antarctic islands. Previous studies on mitochondrial data and species distribution models provided evidence for a homogenous circum-Antarctic population of N. lanceopes. However, to analyze the fine-scale population genetic structure and to examine influences of abiotic environmental conditions on population composition and genetic diversity, a set of fast evolving nuclear microsatellite markers is required. FINDINGS: We report the isolation and characterization of nine polymorphic microsatellite markers from the Antarctic deep-sea shrimp species Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea). Microsatellite markers were screened in 55 individuals from different locations around the Antarctic continent. All markers were polymorphic with 9 to 25 alleles per locus. The observed heterozygosity ranged from 0.545 to 0.927 and the expected heterozygosity from 0.549 to 0.934. CONCLUSIONS: The reported markers provide a novel tool to study genetic structure and diversity in Nematocarcinus lanceopes populations in the Southern Ocean and monitor effects of ongoing climate change in the region on the populations inhabiting these. msat_sequencesThis file contains the nucleotide sequence information for the described microsatellite markers. Primer sites are indicated in the sequences. Dataset Antarc* Antarctic Antarctica Southern Ocean Unknown Antarctic Southern Ocean The Antarctic |
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Open Polar |
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Unknown |
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language |
unknown |
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Life sciences medicine and health care microsatellites Deep sea Southern Ocean Antarctic Nematocarcinus lanceopes Antarctica geo envir |
spellingShingle |
Life sciences medicine and health care microsatellites Deep sea Southern Ocean Antarctic Nematocarcinus lanceopes Antarctica geo envir Dambach, Johannes Raupach, Michael J. Mayer, Christoph Schwarzer, Julia Leese, Florian Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
topic_facet |
Life sciences medicine and health care microsatellites Deep sea Southern Ocean Antarctic Nematocarcinus lanceopes Antarctica geo envir |
description |
BACKGROUND: The shrimp Nematocarcinus lanceopes Bate, 1888 is found in the deep sea around Antarctica and sub-Antarctic islands. Previous studies on mitochondrial data and species distribution models provided evidence for a homogenous circum-Antarctic population of N. lanceopes. However, to analyze the fine-scale population genetic structure and to examine influences of abiotic environmental conditions on population composition and genetic diversity, a set of fast evolving nuclear microsatellite markers is required. FINDINGS: We report the isolation and characterization of nine polymorphic microsatellite markers from the Antarctic deep-sea shrimp species Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea). Microsatellite markers were screened in 55 individuals from different locations around the Antarctic continent. All markers were polymorphic with 9 to 25 alleles per locus. The observed heterozygosity ranged from 0.545 to 0.927 and the expected heterozygosity from 0.549 to 0.934. CONCLUSIONS: The reported markers provide a novel tool to study genetic structure and diversity in Nematocarcinus lanceopes populations in the Southern Ocean and monitor effects of ongoing climate change in the region on the populations inhabiting these. msat_sequencesThis file contains the nucleotide sequence information for the described microsatellite markers. Primer sites are indicated in the sequences. |
format |
Dataset |
author |
Dambach, Johannes Raupach, Michael J. Mayer, Christoph Schwarzer, Julia Leese, Florian |
author_facet |
Dambach, Johannes Raupach, Michael J. Mayer, Christoph Schwarzer, Julia Leese, Florian |
author_sort |
Dambach, Johannes |
title |
Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
title_short |
Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
title_full |
Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
title_fullStr |
Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
title_full_unstemmed |
Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
title_sort |
data from: isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp nematocarcinus lanceopes (crustacea: decapoda: caridea) |
publishDate |
2013 |
url |
https://doi.org/10.5061/dryad.gg3rn |
geographic |
Antarctic Southern Ocean The Antarctic |
geographic_facet |
Antarctic Southern Ocean The Antarctic |
genre |
Antarc* Antarctic Antarctica Southern Ocean |
genre_facet |
Antarc* Antarctic Antarctica Southern Ocean |
op_source |
oai:services.nod.dans.knaw.nl:Products/dans:oai:easy.dans.knaw.nl:easy-dataset:83134 10.5061/dryad.gg3rn oai:easy.dans.knaw.nl:easy-dataset:83134 10|eurocrisdris::fe4903425d9040f680d8610d9079ea14 10|openaire____::9e3be59865b2c1c335d32dae2fe7b254 10|re3data_____::94816e6421eeb072e7742ce6a9decc5f re3data_____::r3d100000044 10|re3data_____::84e123776089ce3c7a33db98d9cd15a8 10|openaire____::081b82f96300b6a6e3d282bad31cb6e2 10|opendoar____::8b6dd7db9af49e67306feb59a8bdc52c |
op_relation |
http://dx.doi.org/10.5061/dryad.gg3rn https://dx.doi.org/10.5061/dryad.gg3rn |
op_rights |
lic_creative-commons |
op_doi |
https://doi.org/10.5061/dryad.gg3rn |
_version_ |
1766256432718544896 |