Species Distribution Modelling of Corals and Sponges from Research Vessel Survey Data in the Newfoundland and Labrador Region for Use in the Identification of Significant Benthic Areas
We used a species distribution modelling approach called random forest (RF) to predict the probability of occurrence and biomass of sponges, sea pens, and large and small gorgonian corals across the entire spatial extent of Fisheries and Oceans, Canada's (DFO) Newfoundland and Labrador Region....
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Data Archiving and Networked Services (DANS)
2019
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Online Access: | https://doi.org/10.17632/zwvv3xx3rc.1 https://doi.org/10.17632/ZWVV3XX3RC |
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fttriple:oai:gotriple.eu:50|dedup_wf_001::5b10f27e06d80d8e51f328722ab78067 2023-05-15T17:05:54+02:00 Species Distribution Modelling of Corals and Sponges from Research Vessel Survey Data in the Newfoundland and Labrador Region for Use in the Identification of Significant Benthic Areas Guijarro-Sabaniel, J Javier Guijarro-Sabaniel Guijarro-Sabaniel, Javier Beazley, Lindsay Kenchington, Ellen Wareham-Hayes, Vonda Gilkinson, Kent Koen-Alonso, Mariano Murillo-Perez, Javier 2019-01-21 https://doi.org/10.17632/zwvv3xx3rc.1 https://doi.org/10.17632/ZWVV3XX3RC undefined unknown Data Archiving and Networked Services (DANS) http://dx.doi.org/10.17632/zwvv3xx3rc.1 http://dx.doi.org/10.17632/ZWVV3XX3RC https://dx.doi.org/10.17632/zwvv3xx3rc.1 https://dx.doi.org/10.17632/zwvv3xx3rc lic_creative-commons oai:easy.dans.knaw.nl:easy-dataset:115938 oai:oai.datacite.org:18054959 10.17632/zwvv3xx3rc.1 doi:10.17632/zwvv3xx3rc oai:oai.datacite.org:18054960 doi:10.17632/zwvv3xx3rc.1 10.17632/zwvv3xx3rc oai:services.nod.dans.knaw.nl:Products/dans:oai:easy.dans.knaw.nl:easy-dataset:115938 10|re3data_____::84e123776089ce3c7a33db98d9cd15a8 10|re3data_____::db814dc656a911b556dba42a331cebe9 10|openaire____::9e3be59865b2c1c335d32dae2fe7b254 10|eurocrisdris::fe4903425d9040f680d8610d9079ea14 Interdisciplinary sciences Benthic Ecology Modelling envir geo Dataset https://vocabularies.coar-repositories.org/resource_types/c_ddb1/ 2019 fttriple https://doi.org/10.17632/zwvv3xx3rc.1 https://doi.org/10.17632/ZWVV3XX3RC https://doi.org/10.17632/zwvv3xx3rc 2023-01-22T16:52:37Z We used a species distribution modelling approach called random forest (RF) to predict the probability of occurrence and biomass of sponges, sea pens, and large and small gorgonian corals across the entire spatial extent of Fisheries and Oceans, Canada's (DFO) Newfoundland and Labrador Region. A suite of 66 environmental variables from different data sources were used. Models utilized catch records from the DFO multispecies trawl survey, DFO/industry northern shrimp surveys, and Spanish trawl surveys. Most models had excellent predictive capacity with cross-validated Area Under the Receiver Operating Characteristic Curve (AUC) values ranging from 0.786 to 0.926. Areas of suitable habitat were identified for each taxon and were contrasted against their known distribution. Generalized additive models (GAMs) were developed to predict the biomass distribution of each taxonomic group and serve as a comparison to the RF models. The RF and GAM models provided similar results, although GAMs provided superior predictions of biomass along the slopes of Newfoundland and Labrador for some taxonomic groups. Aside from providing continuous prediction maps of significant benthic taxa for the entire Newfoundland and Labrador Region that will be useful in ecosystem management decision-making processes, these results could be used to refine the outer boundaries of significant concentrations of these organisms identified by kernel density analyses and identify new suitable habitat not sampled by the trawl surveys. Dataset Labrador region Newfoundland northern shrimp Unknown Newfoundland Gam ENVELOPE(-57.955,-57.955,-61.923,-61.923) |
institution |
Open Polar |
collection |
Unknown |
op_collection_id |
fttriple |
language |
unknown |
topic |
Interdisciplinary sciences Benthic Ecology Modelling envir geo |
spellingShingle |
Interdisciplinary sciences Benthic Ecology Modelling envir geo Guijarro-Sabaniel, J Species Distribution Modelling of Corals and Sponges from Research Vessel Survey Data in the Newfoundland and Labrador Region for Use in the Identification of Significant Benthic Areas |
topic_facet |
Interdisciplinary sciences Benthic Ecology Modelling envir geo |
description |
We used a species distribution modelling approach called random forest (RF) to predict the probability of occurrence and biomass of sponges, sea pens, and large and small gorgonian corals across the entire spatial extent of Fisheries and Oceans, Canada's (DFO) Newfoundland and Labrador Region. A suite of 66 environmental variables from different data sources were used. Models utilized catch records from the DFO multispecies trawl survey, DFO/industry northern shrimp surveys, and Spanish trawl surveys. Most models had excellent predictive capacity with cross-validated Area Under the Receiver Operating Characteristic Curve (AUC) values ranging from 0.786 to 0.926. Areas of suitable habitat were identified for each taxon and were contrasted against their known distribution. Generalized additive models (GAMs) were developed to predict the biomass distribution of each taxonomic group and serve as a comparison to the RF models. The RF and GAM models provided similar results, although GAMs provided superior predictions of biomass along the slopes of Newfoundland and Labrador for some taxonomic groups. Aside from providing continuous prediction maps of significant benthic taxa for the entire Newfoundland and Labrador Region that will be useful in ecosystem management decision-making processes, these results could be used to refine the outer boundaries of significant concentrations of these organisms identified by kernel density analyses and identify new suitable habitat not sampled by the trawl surveys. |
author2 |
Javier Guijarro-Sabaniel Guijarro-Sabaniel, Javier Beazley, Lindsay Kenchington, Ellen Wareham-Hayes, Vonda Gilkinson, Kent Koen-Alonso, Mariano Murillo-Perez, Javier |
format |
Dataset |
author |
Guijarro-Sabaniel, J |
author_facet |
Guijarro-Sabaniel, J |
author_sort |
Guijarro-Sabaniel, J |
title |
Species Distribution Modelling of Corals and Sponges from Research Vessel Survey Data in the Newfoundland and Labrador Region for Use in the Identification of Significant Benthic Areas |
title_short |
Species Distribution Modelling of Corals and Sponges from Research Vessel Survey Data in the Newfoundland and Labrador Region for Use in the Identification of Significant Benthic Areas |
title_full |
Species Distribution Modelling of Corals and Sponges from Research Vessel Survey Data in the Newfoundland and Labrador Region for Use in the Identification of Significant Benthic Areas |
title_fullStr |
Species Distribution Modelling of Corals and Sponges from Research Vessel Survey Data in the Newfoundland and Labrador Region for Use in the Identification of Significant Benthic Areas |
title_full_unstemmed |
Species Distribution Modelling of Corals and Sponges from Research Vessel Survey Data in the Newfoundland and Labrador Region for Use in the Identification of Significant Benthic Areas |
title_sort |
species distribution modelling of corals and sponges from research vessel survey data in the newfoundland and labrador region for use in the identification of significant benthic areas |
publisher |
Data Archiving and Networked Services (DANS) |
publishDate |
2019 |
url |
https://doi.org/10.17632/zwvv3xx3rc.1 https://doi.org/10.17632/ZWVV3XX3RC |
long_lat |
ENVELOPE(-57.955,-57.955,-61.923,-61.923) |
geographic |
Newfoundland Gam |
geographic_facet |
Newfoundland Gam |
genre |
Labrador region Newfoundland northern shrimp |
genre_facet |
Labrador region Newfoundland northern shrimp |
op_source |
oai:easy.dans.knaw.nl:easy-dataset:115938 oai:oai.datacite.org:18054959 10.17632/zwvv3xx3rc.1 doi:10.17632/zwvv3xx3rc oai:oai.datacite.org:18054960 doi:10.17632/zwvv3xx3rc.1 10.17632/zwvv3xx3rc oai:services.nod.dans.knaw.nl:Products/dans:oai:easy.dans.knaw.nl:easy-dataset:115938 10|re3data_____::84e123776089ce3c7a33db98d9cd15a8 10|re3data_____::db814dc656a911b556dba42a331cebe9 10|openaire____::9e3be59865b2c1c335d32dae2fe7b254 10|eurocrisdris::fe4903425d9040f680d8610d9079ea14 |
op_relation |
http://dx.doi.org/10.17632/zwvv3xx3rc.1 http://dx.doi.org/10.17632/ZWVV3XX3RC https://dx.doi.org/10.17632/zwvv3xx3rc.1 https://dx.doi.org/10.17632/zwvv3xx3rc |
op_rights |
lic_creative-commons |
op_doi |
https://doi.org/10.17632/zwvv3xx3rc.1 https://doi.org/10.17632/ZWVV3XX3RC https://doi.org/10.17632/zwvv3xx3rc |
_version_ |
1766060773466963968 |