Data from: Phylogeography of willow grouse (Lagopus lagopus) in the Arctic: taxonomic discordance as inferred from molecular data

Using independently segregating nuclear single nucleotide polymorphisms (SNPs) and mitochondrial control region sequences, we found an east–west division among sampled willow grouse Lagopus lagopus subspecies. This division cut across the range of the subspecies with the largest distribution (lagopu...

Full description

Bibliographic Details
Main Authors: Höglund, Jacob, Wang, Biao, Axelsson, Thomas, Quintela, María
Format: Dataset
Language:unknown
Published: Dryad 2020
Subjects:
geo
Online Access:https://doi.org/10.5061/dryad.k3v35
id fttriple:oai:gotriple.eu:50|dedup_wf_001::354be4f90f3ec1e88901b38170b65b3d
record_format openpolar
spelling fttriple:oai:gotriple.eu:50|dedup_wf_001::354be4f90f3ec1e88901b38170b65b3d 2023-05-15T15:10:48+02:00 Data from: Phylogeography of willow grouse (Lagopus lagopus) in the Arctic: taxonomic discordance as inferred from molecular data Höglund, Jacob Wang, Biao Axelsson, Thomas Quintela, María 2020-07-05 https://doi.org/10.5061/dryad.k3v35 undefined unknown Dryad https://dx.doi.org/10.5061/dryad.k3v35 http://dx.doi.org/10.5061/dryad.k3v35 lic_creative-commons 10.5061/dryad.k3v35 oai:services.nod.dans.knaw.nl:Products/dans:oai:easy.dans.knaw.nl:easy-dataset:83355 oai:easy.dans.knaw.nl:easy-dataset:83355 10|openaire____::9e3be59865b2c1c335d32dae2fe7b254 re3data_____::r3d100000044 10|eurocrisdris::fe4903425d9040f680d8610d9079ea14 10|re3data_____::94816e6421eeb072e7742ce6a9decc5f 10|re3data_____::84e123776089ce3c7a33db98d9cd15a8 10|openaire____::081b82f96300b6a6e3d282bad31cb6e2 Lagopus lagopus kamschatkensis Lagopus lagopus alexandrae willow grouse subspecies Lagopus lagopus Lagopus lagopus muriei Lagopus lagopus scoticus Lagopus lagopus hibernicus Evolutionary Significant Unit Lagopus lagopus lagopus phylogeography Europe Canada Alaska Life sciences medicine and health care envir geo Dataset https://vocabularies.coar-repositories.org/resource_types/c_ddb1/ 2020 fttriple https://doi.org/10.5061/dryad.k3v35 2023-01-22T17:23:31Z Using independently segregating nuclear single nucleotide polymorphisms (SNPs) and mitochondrial control region sequences, we found an east–west division among sampled willow grouse Lagopus lagopus subspecies. This division cut across the range of the subspecies with the largest distribution (lagopus) and thus contradicted existing taxonomic classifications. Russian Lagopus lagopus lagopus tended to cluster with North American willow grouse partly classified as other subspecies. Scandinavian willow grouse (L. l. lagopus) clustered with red grouse from Britain and Ireland (Lagopus lagopus scoticus and Lagopus lagopus hibernicus) but substructuring confirmed the monophyly of the latter. In North America, we could not detect any major genetic divisions apart from two birds described as alexandrae from the Heceta Island (Alaska) when using mitochondrial sequences. Other samples from North America were intermingled regardless of whether they were described as muriei, alexandrae or lagopus. A specimen described as alexandrae was to some extent distinct when analysing the SNP data. The genetic analyses indicated some concordance between genetics and taxonomy but not complete congruence. This is particularly evident for mitochondrial DNA network analyses. We suggest that the taxonomy of this species would benefit by a careful re-examination of the available evidence for subspecies. It appears as if subspecies status is a poor proxy for assigning evolutionary significant units and management units in this species. WillowGrouse_SNP_data Dataset Arctic Alaska Unknown Arctic Canada
institution Open Polar
collection Unknown
op_collection_id fttriple
language unknown
topic Lagopus lagopus kamschatkensis
Lagopus lagopus alexandrae
willow grouse subspecies
Lagopus lagopus
Lagopus lagopus muriei
Lagopus lagopus scoticus
Lagopus lagopus hibernicus
Evolutionary Significant Unit
Lagopus lagopus lagopus
phylogeography
Europe
Canada
Alaska
Life sciences
medicine and health care
envir
geo
spellingShingle Lagopus lagopus kamschatkensis
Lagopus lagopus alexandrae
willow grouse subspecies
Lagopus lagopus
Lagopus lagopus muriei
Lagopus lagopus scoticus
Lagopus lagopus hibernicus
Evolutionary Significant Unit
Lagopus lagopus lagopus
phylogeography
Europe
Canada
Alaska
Life sciences
medicine and health care
envir
geo
Höglund, Jacob
Wang, Biao
Axelsson, Thomas
Quintela, María
Data from: Phylogeography of willow grouse (Lagopus lagopus) in the Arctic: taxonomic discordance as inferred from molecular data
topic_facet Lagopus lagopus kamschatkensis
Lagopus lagopus alexandrae
willow grouse subspecies
Lagopus lagopus
Lagopus lagopus muriei
Lagopus lagopus scoticus
Lagopus lagopus hibernicus
Evolutionary Significant Unit
Lagopus lagopus lagopus
phylogeography
Europe
Canada
Alaska
Life sciences
medicine and health care
envir
geo
description Using independently segregating nuclear single nucleotide polymorphisms (SNPs) and mitochondrial control region sequences, we found an east–west division among sampled willow grouse Lagopus lagopus subspecies. This division cut across the range of the subspecies with the largest distribution (lagopus) and thus contradicted existing taxonomic classifications. Russian Lagopus lagopus lagopus tended to cluster with North American willow grouse partly classified as other subspecies. Scandinavian willow grouse (L. l. lagopus) clustered with red grouse from Britain and Ireland (Lagopus lagopus scoticus and Lagopus lagopus hibernicus) but substructuring confirmed the monophyly of the latter. In North America, we could not detect any major genetic divisions apart from two birds described as alexandrae from the Heceta Island (Alaska) when using mitochondrial sequences. Other samples from North America were intermingled regardless of whether they were described as muriei, alexandrae or lagopus. A specimen described as alexandrae was to some extent distinct when analysing the SNP data. The genetic analyses indicated some concordance between genetics and taxonomy but not complete congruence. This is particularly evident for mitochondrial DNA network analyses. We suggest that the taxonomy of this species would benefit by a careful re-examination of the available evidence for subspecies. It appears as if subspecies status is a poor proxy for assigning evolutionary significant units and management units in this species. WillowGrouse_SNP_data
format Dataset
author Höglund, Jacob
Wang, Biao
Axelsson, Thomas
Quintela, María
author_facet Höglund, Jacob
Wang, Biao
Axelsson, Thomas
Quintela, María
author_sort Höglund, Jacob
title Data from: Phylogeography of willow grouse (Lagopus lagopus) in the Arctic: taxonomic discordance as inferred from molecular data
title_short Data from: Phylogeography of willow grouse (Lagopus lagopus) in the Arctic: taxonomic discordance as inferred from molecular data
title_full Data from: Phylogeography of willow grouse (Lagopus lagopus) in the Arctic: taxonomic discordance as inferred from molecular data
title_fullStr Data from: Phylogeography of willow grouse (Lagopus lagopus) in the Arctic: taxonomic discordance as inferred from molecular data
title_full_unstemmed Data from: Phylogeography of willow grouse (Lagopus lagopus) in the Arctic: taxonomic discordance as inferred from molecular data
title_sort data from: phylogeography of willow grouse (lagopus lagopus) in the arctic: taxonomic discordance as inferred from molecular data
publisher Dryad
publishDate 2020
url https://doi.org/10.5061/dryad.k3v35
geographic Arctic
Canada
geographic_facet Arctic
Canada
genre Arctic
Alaska
genre_facet Arctic
Alaska
op_source 10.5061/dryad.k3v35
oai:services.nod.dans.knaw.nl:Products/dans:oai:easy.dans.knaw.nl:easy-dataset:83355
oai:easy.dans.knaw.nl:easy-dataset:83355
10|openaire____::9e3be59865b2c1c335d32dae2fe7b254
re3data_____::r3d100000044
10|eurocrisdris::fe4903425d9040f680d8610d9079ea14
10|re3data_____::94816e6421eeb072e7742ce6a9decc5f
10|re3data_____::84e123776089ce3c7a33db98d9cd15a8
10|openaire____::081b82f96300b6a6e3d282bad31cb6e2
op_relation https://dx.doi.org/10.5061/dryad.k3v35
http://dx.doi.org/10.5061/dryad.k3v35
op_rights lic_creative-commons
op_doi https://doi.org/10.5061/dryad.k3v35
_version_ 1766341748144996352