Extrapolation in species distribution modelling. application to Southern Ocean marine species.

International audience Species distribution modelling (SDM) has been increasingly applied to Southern Ocean case studies over the past decades, to map the distribution of species and highlight environmental settings driving species distribution. Predictive models have been commonly used for conserva...

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Published in:Progress in Oceanography
Main Authors: Guillaumot, Charlène, Moreau, Camille, Danis, Bruno, Saucède, Thomas
Other Authors: Laboratoire de Biologie Marine (LBM), Université libre de Bruxelles (ULB), Biogéosciences UMR 6282 Dijon (BGS), Université de Bourgogne (UB)-Centre National de la Recherche Scientifique (CNRS), Work supported by a “Fonds pour la formation `a la Recherche dans l’Industrie et l’Agriculture” (FRIA) and “Bourse fondation de la mer”.
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2020
Subjects:
geo
Online Access:https://doi.org/10.1016/j.pocean.2020.102438
https://hal.archives-ouvertes.fr/hal-02985372
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spelling fttriple:oai:gotriple.eu:10670/1.ymrv5m 2023-05-15T13:53:38+02:00 Extrapolation in species distribution modelling. application to Southern Ocean marine species. Guillaumot, Charlène Moreau, Camille Danis, Bruno Saucède, Thomas Laboratoire de Biologie Marine (LBM) Université libre de Bruxelles (ULB) Biogéosciences UMR 6282 Dijon (BGS) Université de Bourgogne (UB)-Centre National de la Recherche Scientifique (CNRS) Work supported by a “Fonds pour la formation `a la Recherche dans l’Industrie et l’Agriculture” (FRIA) and “Bourse fondation de la mer”. 2020-10-01 https://doi.org/10.1016/j.pocean.2020.102438 https://hal.archives-ouvertes.fr/hal-02985372 en eng HAL CCSD Elsevier hal-02985372 doi:10.1016/j.pocean.2020.102438 10670/1.ymrv5m https://hal.archives-ouvertes.fr/hal-02985372 undefined Hyper Article en Ligne - Sciences de l'Homme et de la Société ISSN: 0079-6611 Progress in Oceanography Progress in Oceanography, Elsevier, 2020, 188, pp.102438. ⟨10.1016/j.pocean.2020.102438⟩ Multivariate Environmental Similarity Surface (MESS) Marine species Antarctic Modelling relevance Conservation issues envir geo Journal Article https://vocabularies.coar-repositories.org/resource_types/c_6501/ 2020 fttriple https://doi.org/10.1016/j.pocean.2020.102438 2023-01-22T18:31:35Z International audience Species distribution modelling (SDM) has been increasingly applied to Southern Ocean case studies over the past decades, to map the distribution of species and highlight environmental settings driving species distribution. Predictive models have been commonly used for conservation purposes and supporting the delineation of marine protected areas, but model predictions are rarely associated with extrapolation uncertainty maps.In this study, we used the Multivariate Environmental Similarity Surface (MESS) index to quantify model uncertainty associated to extrapolation. Considering the reference dataset of environmental conditions for which species presence-only records are modelled, extrapolation corresponds to the part of the projection area for which one environmental value at least falls outside of the reference dataset.Six abundant and common sea star species of marine benthic communities of the Southern Ocean were used as case studies. Results show that up to 78% of the projection area is extrapolation, i.e. beyond conditions used for model calibration. Restricting the projection space by the known species ecological requirements (e.g. maximal depth, upper temperature tolerance) and increasing the size of presence datasets were proved efficient to reduce the proportion of extrapolation areas. We estimate that multiplying sampling effort by 2 or 3-fold should help reduce the proportion of extrapolation areas down to 10% in the six studied species.Considering the unexpectedly high levels of extrapolation uncertainty measured in SDM predictions, we strongly recommend that studies report information related to the level of extrapolation. Waiting for improved datasets, adapting modelling methods and providing such uncertainy information in distribution modelling studies are a necessity to accurately interpret model outputs and their reliability. 11 pages Article in Journal/Newspaper Antarc* Antarctic Southern Ocean Unknown Antarctic Southern Ocean Progress in Oceanography 188 102438
institution Open Polar
collection Unknown
op_collection_id fttriple
language English
topic Multivariate Environmental Similarity Surface (MESS)
Marine species
Antarctic
Modelling relevance
Conservation issues
envir
geo
spellingShingle Multivariate Environmental Similarity Surface (MESS)
Marine species
Antarctic
Modelling relevance
Conservation issues
envir
geo
Guillaumot, Charlène
Moreau, Camille
Danis, Bruno
Saucède, Thomas
Extrapolation in species distribution modelling. application to Southern Ocean marine species.
topic_facet Multivariate Environmental Similarity Surface (MESS)
Marine species
Antarctic
Modelling relevance
Conservation issues
envir
geo
description International audience Species distribution modelling (SDM) has been increasingly applied to Southern Ocean case studies over the past decades, to map the distribution of species and highlight environmental settings driving species distribution. Predictive models have been commonly used for conservation purposes and supporting the delineation of marine protected areas, but model predictions are rarely associated with extrapolation uncertainty maps.In this study, we used the Multivariate Environmental Similarity Surface (MESS) index to quantify model uncertainty associated to extrapolation. Considering the reference dataset of environmental conditions for which species presence-only records are modelled, extrapolation corresponds to the part of the projection area for which one environmental value at least falls outside of the reference dataset.Six abundant and common sea star species of marine benthic communities of the Southern Ocean were used as case studies. Results show that up to 78% of the projection area is extrapolation, i.e. beyond conditions used for model calibration. Restricting the projection space by the known species ecological requirements (e.g. maximal depth, upper temperature tolerance) and increasing the size of presence datasets were proved efficient to reduce the proportion of extrapolation areas. We estimate that multiplying sampling effort by 2 or 3-fold should help reduce the proportion of extrapolation areas down to 10% in the six studied species.Considering the unexpectedly high levels of extrapolation uncertainty measured in SDM predictions, we strongly recommend that studies report information related to the level of extrapolation. Waiting for improved datasets, adapting modelling methods and providing such uncertainy information in distribution modelling studies are a necessity to accurately interpret model outputs and their reliability. 11 pages
author2 Laboratoire de Biologie Marine (LBM)
Université libre de Bruxelles (ULB)
Biogéosciences UMR 6282 Dijon (BGS)
Université de Bourgogne (UB)-Centre National de la Recherche Scientifique (CNRS)
Work supported by a “Fonds pour la formation `a la Recherche dans l’Industrie et l’Agriculture” (FRIA) and “Bourse fondation de la mer”.
format Article in Journal/Newspaper
author Guillaumot, Charlène
Moreau, Camille
Danis, Bruno
Saucède, Thomas
author_facet Guillaumot, Charlène
Moreau, Camille
Danis, Bruno
Saucède, Thomas
author_sort Guillaumot, Charlène
title Extrapolation in species distribution modelling. application to Southern Ocean marine species.
title_short Extrapolation in species distribution modelling. application to Southern Ocean marine species.
title_full Extrapolation in species distribution modelling. application to Southern Ocean marine species.
title_fullStr Extrapolation in species distribution modelling. application to Southern Ocean marine species.
title_full_unstemmed Extrapolation in species distribution modelling. application to Southern Ocean marine species.
title_sort extrapolation in species distribution modelling. application to southern ocean marine species.
publisher HAL CCSD
publishDate 2020
url https://doi.org/10.1016/j.pocean.2020.102438
https://hal.archives-ouvertes.fr/hal-02985372
geographic Antarctic
Southern Ocean
geographic_facet Antarctic
Southern Ocean
genre Antarc*
Antarctic
Southern Ocean
genre_facet Antarc*
Antarctic
Southern Ocean
op_source Hyper Article en Ligne - Sciences de l'Homme et de la Société
ISSN: 0079-6611
Progress in Oceanography
Progress in Oceanography, Elsevier, 2020, 188, pp.102438. ⟨10.1016/j.pocean.2020.102438⟩
op_relation hal-02985372
doi:10.1016/j.pocean.2020.102438
10670/1.ymrv5m
https://hal.archives-ouvertes.fr/hal-02985372
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op_doi https://doi.org/10.1016/j.pocean.2020.102438
container_title Progress in Oceanography
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