The hydrological context determines the beta-diversity of aerobic anoxygenic phototrophic bacteria in European Arctic seas but does not favor endemism
International audience Despite an increasing number of studies over the last 15 years, aerobic anoxygenic photoheterotrophic (AAP) bacteria remain a puzzling functional group in terms of physiology, metabolism, and ecology. To contribute to a better knowledge of their environmental distribution, the...
Published in: | Frontiers in Microbiology |
---|---|
Main Authors: | , |
Other Authors: | , , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
HAL CCSD
2015
|
Subjects: | |
Online Access: | https://doi.org/10.3389/fmicb.2015.00638 https://hal.archives-ouvertes.fr/hal-01218500/file/fmicb-06-00638.pdf https://hal.archives-ouvertes.fr/hal-01218500 |
id |
fttriple:oai:gotriple.eu:10670/1.uzmiq5 |
---|---|
record_format |
openpolar |
spelling |
fttriple:oai:gotriple.eu:10670/1.uzmiq5 2023-05-15T14:54:50+02:00 The hydrological context determines the beta-diversity of aerobic anoxygenic phototrophic bacteria in European Arctic seas but does not favor endemism Lehours, Anne-Catherine Jeanthon, Christian Laboratoire Microorganismes : Génome et Environnement (LMGE) Université Blaise Pascal - Clermont-Ferrand 2 (UBP)-Centre National de la Recherche Scientifique (CNRS)-Université d'Auvergne - Clermont-Ferrand I (UdA) MArine Phototrophic Prokaryotes (MAPP) Adaptation et diversité en milieu marin (AD2M) Station biologique de Roscoff Roscoff (SBR) Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Station biologique de Roscoff Roscoff (SBR) Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS) program LEFECYBER (CNRS-INSU) CNRS European Project: 287589,EC:FP7:KBBE,FP7-OCEAN-2011,MICRO B3(2012) 2015-07-01 https://doi.org/10.3389/fmicb.2015.00638 https://hal.archives-ouvertes.fr/hal-01218500/file/fmicb-06-00638.pdf https://hal.archives-ouvertes.fr/hal-01218500 en eng HAL CCSD Frontiers Media hal-01218500 doi:10.3389/fmicb.2015.00638 10670/1.uzmiq5 https://hal.archives-ouvertes.fr/hal-01218500/file/fmicb-06-00638.pdf https://hal.archives-ouvertes.fr/hal-01218500 lic_creative-commons other Hyper Article en Ligne - Sciences de l'Homme et de la Société ISSN: 1664-302X EISSN: 1664-302X Frontiers in Microbiology Frontiers in Microbiology, Frontiers Media, 2015, 6, pp.638. ⟨10.3389/fmicb.2015.00638⟩ photoheterotrophy pufM gene diversity aerobic anoxygenic phototrophic bacteria Arctic envir geo Journal Article https://vocabularies.coar-repositories.org/resource_types/c_6501/ 2015 fttriple https://doi.org/10.3389/fmicb.2015.00638 2023-01-22T17:37:39Z International audience Despite an increasing number of studies over the last 15 years, aerobic anoxygenic photoheterotrophic (AAP) bacteria remain a puzzling functional group in terms of physiology, metabolism, and ecology. To contribute to a better knowledge of their environmental distribution, the present study aims at analyzing their diversity and structure at the boundary between the Norwegian, Greenland, and Barents Seas. The polymorphism of a marker gene encoding a sub-unit of the photosynthetic apparatus (pufM gene) was analyzed and attempted to be related to environmental parameters. The Atlantic or Arctic origin of water masses had a strong impact on the AAP bacterial community structure whose populations mostly belonged to the Alpha- and Gammaproteobacteria. A majority (>60%) of pufM sequences were affiliated to the Gammaproteobacteria reasserting that this class often represents the major component of the AAP bacterial community in oceanic regions. Two alphaproteobacterial groups dominate locally suggesting that they can constitute key players in this marine system transiently. We found that temperature is a major determinant of alpha diversity of AAP bacteria in this marine biome with specific clades emerging locally according to the partitioning of water masses. Whereas we expected specific AAP bacterial populations in this peculiar and newly explored ecosystem, most pufM sequences were highly related to sequences retrieved elsewhere. This observation highlights that the studied area does not favor AAP bacteria endemism but also opens new questions about the truthfulness of biogeographical patterns and on the extent of AAP bacterial diversity. Article in Journal/Newspaper Arctic Greenland Unknown Arctic Greenland Frontiers in Microbiology 6 |
institution |
Open Polar |
collection |
Unknown |
op_collection_id |
fttriple |
language |
English |
topic |
photoheterotrophy pufM gene diversity aerobic anoxygenic phototrophic bacteria Arctic envir geo |
spellingShingle |
photoheterotrophy pufM gene diversity aerobic anoxygenic phototrophic bacteria Arctic envir geo Lehours, Anne-Catherine Jeanthon, Christian The hydrological context determines the beta-diversity of aerobic anoxygenic phototrophic bacteria in European Arctic seas but does not favor endemism |
topic_facet |
photoheterotrophy pufM gene diversity aerobic anoxygenic phototrophic bacteria Arctic envir geo |
description |
International audience Despite an increasing number of studies over the last 15 years, aerobic anoxygenic photoheterotrophic (AAP) bacteria remain a puzzling functional group in terms of physiology, metabolism, and ecology. To contribute to a better knowledge of their environmental distribution, the present study aims at analyzing their diversity and structure at the boundary between the Norwegian, Greenland, and Barents Seas. The polymorphism of a marker gene encoding a sub-unit of the photosynthetic apparatus (pufM gene) was analyzed and attempted to be related to environmental parameters. The Atlantic or Arctic origin of water masses had a strong impact on the AAP bacterial community structure whose populations mostly belonged to the Alpha- and Gammaproteobacteria. A majority (>60%) of pufM sequences were affiliated to the Gammaproteobacteria reasserting that this class often represents the major component of the AAP bacterial community in oceanic regions. Two alphaproteobacterial groups dominate locally suggesting that they can constitute key players in this marine system transiently. We found that temperature is a major determinant of alpha diversity of AAP bacteria in this marine biome with specific clades emerging locally according to the partitioning of water masses. Whereas we expected specific AAP bacterial populations in this peculiar and newly explored ecosystem, most pufM sequences were highly related to sequences retrieved elsewhere. This observation highlights that the studied area does not favor AAP bacteria endemism but also opens new questions about the truthfulness of biogeographical patterns and on the extent of AAP bacterial diversity. |
author2 |
Laboratoire Microorganismes : Génome et Environnement (LMGE) Université Blaise Pascal - Clermont-Ferrand 2 (UBP)-Centre National de la Recherche Scientifique (CNRS)-Université d'Auvergne - Clermont-Ferrand I (UdA) MArine Phototrophic Prokaryotes (MAPP) Adaptation et diversité en milieu marin (AD2M) Station biologique de Roscoff Roscoff (SBR) Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Station biologique de Roscoff Roscoff (SBR) Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS) program LEFECYBER (CNRS-INSU) CNRS European Project: 287589,EC:FP7:KBBE,FP7-OCEAN-2011,MICRO B3(2012) |
format |
Article in Journal/Newspaper |
author |
Lehours, Anne-Catherine Jeanthon, Christian |
author_facet |
Lehours, Anne-Catherine Jeanthon, Christian |
author_sort |
Lehours, Anne-Catherine |
title |
The hydrological context determines the beta-diversity of aerobic anoxygenic phototrophic bacteria in European Arctic seas but does not favor endemism |
title_short |
The hydrological context determines the beta-diversity of aerobic anoxygenic phototrophic bacteria in European Arctic seas but does not favor endemism |
title_full |
The hydrological context determines the beta-diversity of aerobic anoxygenic phototrophic bacteria in European Arctic seas but does not favor endemism |
title_fullStr |
The hydrological context determines the beta-diversity of aerobic anoxygenic phototrophic bacteria in European Arctic seas but does not favor endemism |
title_full_unstemmed |
The hydrological context determines the beta-diversity of aerobic anoxygenic phototrophic bacteria in European Arctic seas but does not favor endemism |
title_sort |
hydrological context determines the beta-diversity of aerobic anoxygenic phototrophic bacteria in european arctic seas but does not favor endemism |
publisher |
HAL CCSD |
publishDate |
2015 |
url |
https://doi.org/10.3389/fmicb.2015.00638 https://hal.archives-ouvertes.fr/hal-01218500/file/fmicb-06-00638.pdf https://hal.archives-ouvertes.fr/hal-01218500 |
geographic |
Arctic Greenland |
geographic_facet |
Arctic Greenland |
genre |
Arctic Greenland |
genre_facet |
Arctic Greenland |
op_source |
Hyper Article en Ligne - Sciences de l'Homme et de la Société ISSN: 1664-302X EISSN: 1664-302X Frontiers in Microbiology Frontiers in Microbiology, Frontiers Media, 2015, 6, pp.638. ⟨10.3389/fmicb.2015.00638⟩ |
op_relation |
hal-01218500 doi:10.3389/fmicb.2015.00638 10670/1.uzmiq5 https://hal.archives-ouvertes.fr/hal-01218500/file/fmicb-06-00638.pdf https://hal.archives-ouvertes.fr/hal-01218500 |
op_rights |
lic_creative-commons other |
op_doi |
https://doi.org/10.3389/fmicb.2015.00638 |
container_title |
Frontiers in Microbiology |
container_volume |
6 |
_version_ |
1766326584465162240 |