Effects of Lugol's iodine on long-term preservation of marine plankton samples for molecular and stable carbon and nitrogen isotope analyses
Carbon and nitrogen stable isotope and molecular analyses are common tools for marine ecological and biological research. However, it is difficult to fix samples for both analyses using only one preservative. A solution of potassium iodide and iodine (known as Lugol's iodine solution) is consid...
Published in: | Limnology and Oceanography: Methods |
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Main Authors: | , , , , |
Language: | English |
Published: |
John Wiley & Sons
2020
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Subjects: | |
Online Access: | https://oacis.repo.nii.ac.jp/records/2694 |
_version_ | 1829301398517317632 |
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author | Sano, Masayoshi Makabe, Ryosuke Kurosawa, Norio Moteki, Masato Odate, Tsuneo |
author_facet | Sano, Masayoshi Makabe, Ryosuke Kurosawa, Norio Moteki, Masato Odate, Tsuneo |
author_sort | Sano, Masayoshi |
collection | TUMSAT-OACIS (Tokyo University of Marine Science and Technology: Open Access Collection of International and Scholarly Papers) |
container_issue | 11 |
container_start_page | 635 |
container_title | Limnology and Oceanography: Methods |
container_volume | 18 |
description | Carbon and nitrogen stable isotope and molecular analyses are common tools for marine ecological and biological research. However, it is difficult to fix samples for both analyses using only one preservative. A solution of potassium iodide and iodine (known as Lugol's iodine solution) is considered to be a suitable preservative; however, the effectiveness of Lugol's iodine solution for long-term preservation of samples for stable isotope analysis and molecular analysis has not yet been investigated. We tested the effectiveness of 5% and 10% Lugol's iodine solutions by comparing them with marine plankton samples preserved in a 5% formalin solution, as well as preserved by freezing. Although δ13C and δ15N values of samples fixed in 5% formalin and 5% Lugol's iodine solution were significantly different from those of frozen samples, there were no significant differences in both δ13C and δ15N values between samples fixed in 10% Lugol's iodine solution and frozen samples, when preserved for a duration from 1 week up to 6 months. Polymerase chain reaction (PCR) assay of samples fixed in 10% Lugol's iodine solution after 18 months of preservation succeeded; however, the DNA in samples fixed in 5% formalin and 5% Lugol's iodine solution could not be amplified using PCR. There was no difference in the sequences of partial 18S rRNA genes between samples fixed in 10% Lugol's solution and frozen samples. Thus, we conclude that 10% Lugol's solution is a suitable fixative for both of carbon and nitrogen stable isotope and molecular analyses. 17H06319 journal article |
genre | Antarc* Antarctic Sea ice |
genre_facet | Antarc* Antarctic Sea ice |
geographic | Antarctic The Antarctic |
geographic_facet | Antarctic The Antarctic |
id | fttokyounivmst:oai:oacis.repo.nii.ac.jp:00002694 |
institution | Open Polar |
language | English |
op_collection_id | fttokyounivmst |
op_container_end_page | 643 |
op_doi | https://doi.org/10.1002/lom3.10390 |
op_relation | https://doi.org/10.1002/lom3.10390 Publisher's Version/PDF (OpenAccess) American Society of Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/ KAKEN研究課題: 海氷下の生態系と物質循環の相互作用 https://kaken.nii.ac.jp/ja/grant/KAKENHI-PLANNED-17H06319/ 研究代表者:茂木 正人 (東京海洋大学) https://nrid.nii.ac.jp/ja/nrid/1000050330684/ Press Release http://id.nii.ac.jp/1342/00002618/ Limnology and Oceanography: Methods 11 18 635 643 https://oacis.repo.nii.ac.jp/records/2694 |
op_rights | metadata only access |
publishDate | 2020 |
publisher | John Wiley & Sons |
record_format | openpolar |
spelling | fttokyounivmst:oai:oacis.repo.nii.ac.jp:00002694 2025-04-13T14:09:32+00:00 Effects of Lugol's iodine on long-term preservation of marine plankton samples for molecular and stable carbon and nitrogen isotope analyses Sano, Masayoshi Makabe, Ryosuke Kurosawa, Norio Moteki, Masato Odate, Tsuneo 2020-09-15 https://oacis.repo.nii.ac.jp/records/2694 eng eng John Wiley & Sons https://doi.org/10.1002/lom3.10390 Publisher's Version/PDF (OpenAccess) American Society of Limnology and Oceanography https://aslopubs.onlinelibrary.wiley.com/ KAKEN研究課題: 海氷下の生態系と物質循環の相互作用 https://kaken.nii.ac.jp/ja/grant/KAKENHI-PLANNED-17H06319/ 研究代表者:茂木 正人 (東京海洋大学) https://nrid.nii.ac.jp/ja/nrid/1000050330684/ Press Release http://id.nii.ac.jp/1342/00002618/ Limnology and Oceanography: Methods 11 18 635 643 https://oacis.repo.nii.ac.jp/records/2694 metadata only access 科学研究費研究成果 海氷下の生態系と物質循環の相互作用 Ecosystem dynamics in the Antarctic sea ice zone 2020 fttokyounivmst https://doi.org/10.1002/lom3.10390 2025-03-19T10:26:52Z Carbon and nitrogen stable isotope and molecular analyses are common tools for marine ecological and biological research. However, it is difficult to fix samples for both analyses using only one preservative. A solution of potassium iodide and iodine (known as Lugol's iodine solution) is considered to be a suitable preservative; however, the effectiveness of Lugol's iodine solution for long-term preservation of samples for stable isotope analysis and molecular analysis has not yet been investigated. We tested the effectiveness of 5% and 10% Lugol's iodine solutions by comparing them with marine plankton samples preserved in a 5% formalin solution, as well as preserved by freezing. Although δ13C and δ15N values of samples fixed in 5% formalin and 5% Lugol's iodine solution were significantly different from those of frozen samples, there were no significant differences in both δ13C and δ15N values between samples fixed in 10% Lugol's iodine solution and frozen samples, when preserved for a duration from 1 week up to 6 months. Polymerase chain reaction (PCR) assay of samples fixed in 10% Lugol's iodine solution after 18 months of preservation succeeded; however, the DNA in samples fixed in 5% formalin and 5% Lugol's iodine solution could not be amplified using PCR. There was no difference in the sequences of partial 18S rRNA genes between samples fixed in 10% Lugol's solution and frozen samples. Thus, we conclude that 10% Lugol's solution is a suitable fixative for both of carbon and nitrogen stable isotope and molecular analyses. 17H06319 journal article Other/Unknown Material Antarc* Antarctic Sea ice TUMSAT-OACIS (Tokyo University of Marine Science and Technology: Open Access Collection of International and Scholarly Papers) Antarctic The Antarctic Limnology and Oceanography: Methods 18 11 635 643 |
spellingShingle | 科学研究費研究成果 海氷下の生態系と物質循環の相互作用 Ecosystem dynamics in the Antarctic sea ice zone Sano, Masayoshi Makabe, Ryosuke Kurosawa, Norio Moteki, Masato Odate, Tsuneo Effects of Lugol's iodine on long-term preservation of marine plankton samples for molecular and stable carbon and nitrogen isotope analyses |
title | Effects of Lugol's iodine on long-term preservation of marine plankton samples for molecular and stable carbon and nitrogen isotope analyses |
title_full | Effects of Lugol's iodine on long-term preservation of marine plankton samples for molecular and stable carbon and nitrogen isotope analyses |
title_fullStr | Effects of Lugol's iodine on long-term preservation of marine plankton samples for molecular and stable carbon and nitrogen isotope analyses |
title_full_unstemmed | Effects of Lugol's iodine on long-term preservation of marine plankton samples for molecular and stable carbon and nitrogen isotope analyses |
title_short | Effects of Lugol's iodine on long-term preservation of marine plankton samples for molecular and stable carbon and nitrogen isotope analyses |
title_sort | effects of lugol's iodine on long-term preservation of marine plankton samples for molecular and stable carbon and nitrogen isotope analyses |
topic | 科学研究費研究成果 海氷下の生態系と物質循環の相互作用 Ecosystem dynamics in the Antarctic sea ice zone |
topic_facet | 科学研究費研究成果 海氷下の生態系と物質循環の相互作用 Ecosystem dynamics in the Antarctic sea ice zone |
url | https://oacis.repo.nii.ac.jp/records/2694 |