Desulfovibrio frigidus sp. nov. and Desulfovibrio ferrireducens sp. nov., psychrotolerant bacteria isolated from Arctic fjord sediments (Svalbard) with the ability to reduce Fe(III)

Udgivelsesdato: 2006-Apr Strains 18T, 61T and 77 were isolated from two permanently cold fjord sediments on the west coast of Svalbard. The three psychrotolerant strains, with temperature optima at 20-23 degrees C, were able to grow at the freezing point of sea water, -2 degrees C. The strains oxidi...

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Published in:International Journal of Systematic and Evolutionary Microbiology
Main Authors: Vandieken, Verona, Knoblauch, Christian, Jørgensen, Bo Barker
Format: Article in Journal/Newspaper
Language:English
Published: 2006
Subjects:
DNA
RNA
16S
Online Access:https://portal.findresearcher.sdu.dk/da/publications/13b88800-2f60-11de-b0ce-000ea68e967b
https://doi.org/10.1099/ijs.0.64057-0
id ftsydanskunivpub:oai:sdu.dk:publications/13b88800-2f60-11de-b0ce-000ea68e967b
record_format openpolar
spelling ftsydanskunivpub:oai:sdu.dk:publications/13b88800-2f60-11de-b0ce-000ea68e967b 2024-09-09T19:15:24+00:00 Desulfovibrio frigidus sp. nov. and Desulfovibrio ferrireducens sp. nov., psychrotolerant bacteria isolated from Arctic fjord sediments (Svalbard) with the ability to reduce Fe(III) Vandieken, Verona Knoblauch, Christian Jørgensen, Bo Barker 2006-04-01 https://portal.findresearcher.sdu.dk/da/publications/13b88800-2f60-11de-b0ce-000ea68e967b https://doi.org/10.1099/ijs.0.64057-0 eng eng https://portal.findresearcher.sdu.dk/da/publications/13b88800-2f60-11de-b0ce-000ea68e967b info:eu-repo/semantics/restrictedAccess Vandieken , V , Knoblauch , C & Jørgensen , B B 2006 , ' Desulfovibrio frigidus sp. nov. and Desulfovibrio ferrireducens sp. nov., psychrotolerant bacteria isolated from Arctic fjord sediments (Svalbard) with the ability to reduce Fe(III) ' , International Journal of Systematic and Evolutionary Microbiology , vol. 56 , no. Pt 4 , pp. 681-685 . https://doi.org/10.1099/ijs.0.64057-0 Arctic Regions Cold Temperature DNA Bacterial Ribosomal Desulfovibrio Ferric Compounds Genes rRNA Geologic Sediments Molecular Sequence Data RNA 16S article 2006 ftsydanskunivpub https://doi.org/10.1099/ijs.0.64057-0 2024-06-18T14:20:12Z Udgivelsesdato: 2006-Apr Strains 18T, 61T and 77 were isolated from two permanently cold fjord sediments on the west coast of Svalbard. The three psychrotolerant strains, with temperature optima at 20-23 degrees C, were able to grow at the freezing point of sea water, -2 degrees C. The strains oxidized important fermentation products such as hydrogen, formate and lactate with sulfate as the electron acceptor. Sulfate could be replaced by sulfite, thiosulfate or elemental sulfur. Poorly crystalline and soluble Fe(III) compounds were reduced in sulfate-free medium, but no growth occurred under these conditions. In the absence of electron acceptors, fermentative growth was possible. The pH optimum for the strains was around 7.1. The DNA G+C contents were 43.3 and 42.0 mol% for strains 18T and 61T, respectively. Strains 18T, 61T and 77 were most closely related to Desulfovibrio hydrothermalis (95.0-95.7 % 16S rRNA gene sequence similarity). Strains 18T and 77, exhibiting 99.9 % sequence similarity, represent a novel species for which the name Desulfovibrio frigidus sp. nov. is proposed. The type strain is strain 18T (=DSM 17176T = JCM 12924T). Strain 61T was closely related to strains 18T and 77 (97.6 and 97.5 % 16S rRNA gene sequence similarity), but on the basis of DNA-DNA hybridization strain 61T represents a novel species for which the name Desulfovibrio ferrireducens sp. nov. is proposed. The type strain is strain 61T (=DSM 16995T = JCM 12925T). Article in Journal/Newspaper Arctic Arctic Svalbard University of Southern Denmark Research Portal Arctic Svalbard International Journal of Systematic and Evolutionary Microbiology 56 4 681 685
institution Open Polar
collection University of Southern Denmark Research Portal
op_collection_id ftsydanskunivpub
language English
topic Arctic Regions
Cold Temperature
DNA
Bacterial
Ribosomal
Desulfovibrio
Ferric Compounds
Genes
rRNA
Geologic Sediments
Molecular Sequence Data
RNA
16S
spellingShingle Arctic Regions
Cold Temperature
DNA
Bacterial
Ribosomal
Desulfovibrio
Ferric Compounds
Genes
rRNA
Geologic Sediments
Molecular Sequence Data
RNA
16S
Vandieken, Verona
Knoblauch, Christian
Jørgensen, Bo Barker
Desulfovibrio frigidus sp. nov. and Desulfovibrio ferrireducens sp. nov., psychrotolerant bacteria isolated from Arctic fjord sediments (Svalbard) with the ability to reduce Fe(III)
topic_facet Arctic Regions
Cold Temperature
DNA
Bacterial
Ribosomal
Desulfovibrio
Ferric Compounds
Genes
rRNA
Geologic Sediments
Molecular Sequence Data
RNA
16S
description Udgivelsesdato: 2006-Apr Strains 18T, 61T and 77 were isolated from two permanently cold fjord sediments on the west coast of Svalbard. The three psychrotolerant strains, with temperature optima at 20-23 degrees C, were able to grow at the freezing point of sea water, -2 degrees C. The strains oxidized important fermentation products such as hydrogen, formate and lactate with sulfate as the electron acceptor. Sulfate could be replaced by sulfite, thiosulfate or elemental sulfur. Poorly crystalline and soluble Fe(III) compounds were reduced in sulfate-free medium, but no growth occurred under these conditions. In the absence of electron acceptors, fermentative growth was possible. The pH optimum for the strains was around 7.1. The DNA G+C contents were 43.3 and 42.0 mol% for strains 18T and 61T, respectively. Strains 18T, 61T and 77 were most closely related to Desulfovibrio hydrothermalis (95.0-95.7 % 16S rRNA gene sequence similarity). Strains 18T and 77, exhibiting 99.9 % sequence similarity, represent a novel species for which the name Desulfovibrio frigidus sp. nov. is proposed. The type strain is strain 18T (=DSM 17176T = JCM 12924T). Strain 61T was closely related to strains 18T and 77 (97.6 and 97.5 % 16S rRNA gene sequence similarity), but on the basis of DNA-DNA hybridization strain 61T represents a novel species for which the name Desulfovibrio ferrireducens sp. nov. is proposed. The type strain is strain 61T (=DSM 16995T = JCM 12925T).
format Article in Journal/Newspaper
author Vandieken, Verona
Knoblauch, Christian
Jørgensen, Bo Barker
author_facet Vandieken, Verona
Knoblauch, Christian
Jørgensen, Bo Barker
author_sort Vandieken, Verona
title Desulfovibrio frigidus sp. nov. and Desulfovibrio ferrireducens sp. nov., psychrotolerant bacteria isolated from Arctic fjord sediments (Svalbard) with the ability to reduce Fe(III)
title_short Desulfovibrio frigidus sp. nov. and Desulfovibrio ferrireducens sp. nov., psychrotolerant bacteria isolated from Arctic fjord sediments (Svalbard) with the ability to reduce Fe(III)
title_full Desulfovibrio frigidus sp. nov. and Desulfovibrio ferrireducens sp. nov., psychrotolerant bacteria isolated from Arctic fjord sediments (Svalbard) with the ability to reduce Fe(III)
title_fullStr Desulfovibrio frigidus sp. nov. and Desulfovibrio ferrireducens sp. nov., psychrotolerant bacteria isolated from Arctic fjord sediments (Svalbard) with the ability to reduce Fe(III)
title_full_unstemmed Desulfovibrio frigidus sp. nov. and Desulfovibrio ferrireducens sp. nov., psychrotolerant bacteria isolated from Arctic fjord sediments (Svalbard) with the ability to reduce Fe(III)
title_sort desulfovibrio frigidus sp. nov. and desulfovibrio ferrireducens sp. nov., psychrotolerant bacteria isolated from arctic fjord sediments (svalbard) with the ability to reduce fe(iii)
publishDate 2006
url https://portal.findresearcher.sdu.dk/da/publications/13b88800-2f60-11de-b0ce-000ea68e967b
https://doi.org/10.1099/ijs.0.64057-0
geographic Arctic
Svalbard
geographic_facet Arctic
Svalbard
genre Arctic
Arctic
Svalbard
genre_facet Arctic
Arctic
Svalbard
op_source Vandieken , V , Knoblauch , C & Jørgensen , B B 2006 , ' Desulfovibrio frigidus sp. nov. and Desulfovibrio ferrireducens sp. nov., psychrotolerant bacteria isolated from Arctic fjord sediments (Svalbard) with the ability to reduce Fe(III) ' , International Journal of Systematic and Evolutionary Microbiology , vol. 56 , no. Pt 4 , pp. 681-685 . https://doi.org/10.1099/ijs.0.64057-0
op_relation https://portal.findresearcher.sdu.dk/da/publications/13b88800-2f60-11de-b0ce-000ea68e967b
op_rights info:eu-repo/semantics/restrictedAccess
op_doi https://doi.org/10.1099/ijs.0.64057-0
container_title International Journal of Systematic and Evolutionary Microbiology
container_volume 56
container_issue 4
container_start_page 681
op_container_end_page 685
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