Significance of gene variants for the functional biogeography of the near-surface Atlantic Ocean microbiome

Abstract Microbial communities are major drivers of global elemental cycles in the oceans due to their high abundance and enormous taxonomic and functional diversity. Recent studies assessed microbial taxonomic and functional biogeography in global oceans but microbial functional biogeography remain...

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Published in:Nature Communications
Main Authors: Dlugosch, Leon, Poehlein, Anja, Wemheuer, Bernd, Pfeiffer, Birgit, Badewien, Thomas H., Daniel, Rolf, Simon, Meinhard
Format: Article in Journal/Newspaper
Language:English
Published: 2022
Subjects:
Kos
Online Access:https://resolver.sub.uni-goettingen.de/purl?gro-2/105966
https://doi.org/10.1038/s41467-022-28128-8
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spelling ftsubgoettingen:oai:publications.goettingen-research-online.de:2/105966 2023-09-05T13:23:28+02:00 Significance of gene variants for the functional biogeography of the near-surface Atlantic Ocean microbiome Dlugosch, Leon Poehlein, Anja Wemheuer, Bernd Pfeiffer, Birgit Badewien, Thomas H. Daniel, Rolf Simon, Meinhard 2022 https://resolver.sub.uni-goettingen.de/purl?gro-2/105966 https://doi.org/10.1038/s41467-022-28128-8 en eng 2041-1723 https://resolver.sub.uni-goettingen.de/purl?gro-2/105966 doi:10.1038/s41467-022-28128-8 28128 https://creativecommons.org/licenses/by/4.0 journal_article yes 2022 ftsubgoettingen https://doi.org/10.1038/s41467-022-28128-8 2023-08-20T22:16:18Z Abstract Microbial communities are major drivers of global elemental cycles in the oceans due to their high abundance and enormous taxonomic and functional diversity. Recent studies assessed microbial taxonomic and functional biogeography in global oceans but microbial functional biogeography remains poorly studied. Here we show that in the near-surface Atlantic and Southern Ocean between 62°S and 47°N microbial communities exhibit distinct taxonomic and functional adaptations to regional environmental conditions. Richness and diversity showed maxima around 40° latitude and intermediate temperatures, especially in functional genes (KEGG-orthologues, KOs) and gene profiles. A cluster analysis yielded three clusters of KOs but five clusters of genes differing in the abundance of genes involved in nutrient and energy acquisition. Gene profiles showed much higher distance-decay rates than KO and taxonomic profiles. Biotic factors were identified as highly influential in explaining the observed patterns in the functional profiles, whereas temperature and biogeographic province mainly explained the observed taxonomic patterns. Our results thus indicate fine-tuned genetic adaptions of microbial communities to regional biotic and environmental conditions in the Atlantic and Southern Ocean. Deutsche Forschungsgemeinschaft Article in Journal/Newspaper Southern Ocean Georg-August-Universität Göttingen: GoeScholar Southern Ocean Kos ENVELOPE(143.432,143.432,75.709,75.709) Nature Communications 13 1
institution Open Polar
collection Georg-August-Universität Göttingen: GoeScholar
op_collection_id ftsubgoettingen
language English
description Abstract Microbial communities are major drivers of global elemental cycles in the oceans due to their high abundance and enormous taxonomic and functional diversity. Recent studies assessed microbial taxonomic and functional biogeography in global oceans but microbial functional biogeography remains poorly studied. Here we show that in the near-surface Atlantic and Southern Ocean between 62°S and 47°N microbial communities exhibit distinct taxonomic and functional adaptations to regional environmental conditions. Richness and diversity showed maxima around 40° latitude and intermediate temperatures, especially in functional genes (KEGG-orthologues, KOs) and gene profiles. A cluster analysis yielded three clusters of KOs but five clusters of genes differing in the abundance of genes involved in nutrient and energy acquisition. Gene profiles showed much higher distance-decay rates than KO and taxonomic profiles. Biotic factors were identified as highly influential in explaining the observed patterns in the functional profiles, whereas temperature and biogeographic province mainly explained the observed taxonomic patterns. Our results thus indicate fine-tuned genetic adaptions of microbial communities to regional biotic and environmental conditions in the Atlantic and Southern Ocean. Deutsche Forschungsgemeinschaft
format Article in Journal/Newspaper
author Dlugosch, Leon
Poehlein, Anja
Wemheuer, Bernd
Pfeiffer, Birgit
Badewien, Thomas H.
Daniel, Rolf
Simon, Meinhard
spellingShingle Dlugosch, Leon
Poehlein, Anja
Wemheuer, Bernd
Pfeiffer, Birgit
Badewien, Thomas H.
Daniel, Rolf
Simon, Meinhard
Significance of gene variants for the functional biogeography of the near-surface Atlantic Ocean microbiome
author_facet Dlugosch, Leon
Poehlein, Anja
Wemheuer, Bernd
Pfeiffer, Birgit
Badewien, Thomas H.
Daniel, Rolf
Simon, Meinhard
author_sort Dlugosch, Leon
title Significance of gene variants for the functional biogeography of the near-surface Atlantic Ocean microbiome
title_short Significance of gene variants for the functional biogeography of the near-surface Atlantic Ocean microbiome
title_full Significance of gene variants for the functional biogeography of the near-surface Atlantic Ocean microbiome
title_fullStr Significance of gene variants for the functional biogeography of the near-surface Atlantic Ocean microbiome
title_full_unstemmed Significance of gene variants for the functional biogeography of the near-surface Atlantic Ocean microbiome
title_sort significance of gene variants for the functional biogeography of the near-surface atlantic ocean microbiome
publishDate 2022
url https://resolver.sub.uni-goettingen.de/purl?gro-2/105966
https://doi.org/10.1038/s41467-022-28128-8
long_lat ENVELOPE(143.432,143.432,75.709,75.709)
geographic Southern Ocean
Kos
geographic_facet Southern Ocean
Kos
genre Southern Ocean
genre_facet Southern Ocean
op_relation 2041-1723
https://resolver.sub.uni-goettingen.de/purl?gro-2/105966
doi:10.1038/s41467-022-28128-8
28128
op_rights https://creativecommons.org/licenses/by/4.0
op_doi https://doi.org/10.1038/s41467-022-28128-8
container_title Nature Communications
container_volume 13
container_issue 1
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