Comparing neural networks against click train detectors to reveal temporal trends in passive acoustic sperm whale detections

Funding: The Direcció General de Pesca i Medi Marí del Govern de les Illes Balears - support to obtain data about Sperm Whale presence in Emile Baudot and Mallorca Channel. Additionally, we are grateful to the Fundación Biodiversidad of the Ministerio de Transición Ecológica y el Reto Demográfico fo...

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Published in:The Journal of the Acoustical Society of America
Main Authors: Garrobe Fonollosa, Laia, Webber, Thomas, Brotons, José Maria, Cerdà, Margalida, Gillespie, Douglas Michael, Pirotta, Enrico, Rendell, Luke Edward
Other Authors: University of St Andrews.Scottish Oceans Institute, University of St Andrews.School of Biology, University of St Andrews.Sea Mammal Research Unit, University of St Andrews.Marine Alliance for Science & Technology Scotland, University of St Andrews.Bioacoustics group, University of St Andrews.Sound Tags Group, University of St Andrews.Centre for Research into Ecological & Environmental Modelling, University of St Andrews.Centre for Social Learning & Cognitive Evolution, University of St Andrews.Centre for Biological Diversity, University of St Andrews.Institute of Behavioural and Neural Sciences
Format: Article in Journal/Newspaper
Language:English
Published: 2025
Subjects:
Online Access:https://hdl.handle.net/10023/31210
https://doi.org/10.1121/10.0034602
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author Garrobe Fonollosa, Laia
Webber, Thomas
Brotons, José Maria
Cerdà, Margalida
Gillespie, Douglas Michael
Pirotta, Enrico
Rendell, Luke Edward
author2 University of St Andrews.Scottish Oceans Institute
University of St Andrews.School of Biology
University of St Andrews.Sea Mammal Research Unit
University of St Andrews.Marine Alliance for Science & Technology Scotland
University of St Andrews.Bioacoustics group
University of St Andrews.Sound Tags Group
University of St Andrews.Centre for Research into Ecological & Environmental Modelling
University of St Andrews.Centre for Social Learning & Cognitive Evolution
University of St Andrews.Centre for Biological Diversity
University of St Andrews.Institute of Behavioural and Neural Sciences
author_facet Garrobe Fonollosa, Laia
Webber, Thomas
Brotons, José Maria
Cerdà, Margalida
Gillespie, Douglas Michael
Pirotta, Enrico
Rendell, Luke Edward
author_sort Garrobe Fonollosa, Laia
collection University of St Andrews: Digital Research Repository
container_issue 6
container_start_page 4073
container_title The Journal of the Acoustical Society of America
container_volume 156
description Funding: The Direcció General de Pesca i Medi Marí del Govern de les Illes Balears - support to obtain data about Sperm Whale presence in Emile Baudot and Mallorca Channel. Additionally, we are grateful to the Fundación Biodiversidad of the Ministerio de Transición Ecológica y el Reto Demográfico for their support of projects CALMA and CALMADOS, which were conducted to assess the temporal presence of cetaceans in the sea mountains Ausiàs March and Monte Olivas. Passive acoustic monitoring (PAM) is an increasingly popular tool to study vocalising species. The amount of data generated by PAM studies calls for robust automatic classifiers. Deep learning (DL) techniques have been proven effective in identifying acoustic signals in challenging datasets, but due to their black-box nature their underlying biases are hard to quantify. This study compares human analyst annotations, a multi-hypothesis tracking (MHT) click train classifier and a DL-based acoustic classifier to classify acoustic recordings based on the presence or absence of sperm whale (Physeter macrocephalus) click trains and study the temporal and spatial distributions of the Mediterranean sperm whale subpopulation around the Balearic Islands. The MHT and DL classifiers showed agreements with human labels of 85.7% and 85.0%, respectively, on data from sites they were trained on, but both saw a drop in performance when deployed on a new site. Agreement rates between classifiers surpassed those between human experts. Modeled seasonal and diel variations in sperm whale detections for both classifiers showed compatible results, revealing an increase in occurrence and diurnal activity during the summer and autumn months. This study highlights the strengths and limitations of two automatic classification algorithms to extract biologically useful information from large acoustic datasets. Peer reviewed
format Article in Journal/Newspaper
genre Physeter macrocephalus
Sperm whale
genre_facet Physeter macrocephalus
Sperm whale
geographic Calma
geographic_facet Calma
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op_relation Journal of the Acoustical Society of America
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op_rights Copyright © 2024 the Authors. This work has been made available online in accordance with the University of St Andrews Open Access policy. This accepted manuscript is distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. The final published version of this work is available at https://doi.org/10.1121/10.0034602.
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spelling ftstandrewserep:oai:research-repository.st-andrews.ac.uk:10023/31210 2025-04-13T14:25:42+00:00 Comparing neural networks against click train detectors to reveal temporal trends in passive acoustic sperm whale detections Garrobe Fonollosa, Laia Webber, Thomas Brotons, José Maria Cerdà, Margalida Gillespie, Douglas Michael Pirotta, Enrico Rendell, Luke Edward University of St Andrews.Scottish Oceans Institute University of St Andrews.School of Biology University of St Andrews.Sea Mammal Research Unit University of St Andrews.Marine Alliance for Science & Technology Scotland University of St Andrews.Bioacoustics group University of St Andrews.Sound Tags Group University of St Andrews.Centre for Research into Ecological & Environmental Modelling University of St Andrews.Centre for Social Learning & Cognitive Evolution University of St Andrews.Centre for Biological Diversity University of St Andrews.Institute of Behavioural and Neural Sciences 2025-01-23T10:30:11Z 2151286 application/pdf https://hdl.handle.net/10023/31210 https://doi.org/10.1121/10.0034602 eng eng Journal of the Acoustical Society of America 313524580 85212554425 https://hdl.handle.net/10023/31210 doi:10.1121/10.0034602 Copyright © 2024 the Authors. This work has been made available online in accordance with the University of St Andrews Open Access policy. This accepted manuscript is distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. The final published version of this work is available at https://doi.org/10.1121/10.0034602. QH301 Biology DAS QH301 Journal article 2025 ftstandrewserep https://doi.org/10.1121/10.0034602 2025-03-19T08:01:34Z Funding: The Direcció General de Pesca i Medi Marí del Govern de les Illes Balears - support to obtain data about Sperm Whale presence in Emile Baudot and Mallorca Channel. Additionally, we are grateful to the Fundación Biodiversidad of the Ministerio de Transición Ecológica y el Reto Demográfico for their support of projects CALMA and CALMADOS, which were conducted to assess the temporal presence of cetaceans in the sea mountains Ausiàs March and Monte Olivas. Passive acoustic monitoring (PAM) is an increasingly popular tool to study vocalising species. The amount of data generated by PAM studies calls for robust automatic classifiers. Deep learning (DL) techniques have been proven effective in identifying acoustic signals in challenging datasets, but due to their black-box nature their underlying biases are hard to quantify. This study compares human analyst annotations, a multi-hypothesis tracking (MHT) click train classifier and a DL-based acoustic classifier to classify acoustic recordings based on the presence or absence of sperm whale (Physeter macrocephalus) click trains and study the temporal and spatial distributions of the Mediterranean sperm whale subpopulation around the Balearic Islands. The MHT and DL classifiers showed agreements with human labels of 85.7% and 85.0%, respectively, on data from sites they were trained on, but both saw a drop in performance when deployed on a new site. Agreement rates between classifiers surpassed those between human experts. Modeled seasonal and diel variations in sperm whale detections for both classifiers showed compatible results, revealing an increase in occurrence and diurnal activity during the summer and autumn months. This study highlights the strengths and limitations of two automatic classification algorithms to extract biologically useful information from large acoustic datasets. Peer reviewed Article in Journal/Newspaper Physeter macrocephalus Sperm whale University of St Andrews: Digital Research Repository Calma ENVELOPE(-65.833,-65.833,-65.967,-65.967) The Journal of the Acoustical Society of America 156 6 4073 4084
spellingShingle QH301 Biology
DAS
QH301
Garrobe Fonollosa, Laia
Webber, Thomas
Brotons, José Maria
Cerdà, Margalida
Gillespie, Douglas Michael
Pirotta, Enrico
Rendell, Luke Edward
Comparing neural networks against click train detectors to reveal temporal trends in passive acoustic sperm whale detections
title Comparing neural networks against click train detectors to reveal temporal trends in passive acoustic sperm whale detections
title_full Comparing neural networks against click train detectors to reveal temporal trends in passive acoustic sperm whale detections
title_fullStr Comparing neural networks against click train detectors to reveal temporal trends in passive acoustic sperm whale detections
title_full_unstemmed Comparing neural networks against click train detectors to reveal temporal trends in passive acoustic sperm whale detections
title_short Comparing neural networks against click train detectors to reveal temporal trends in passive acoustic sperm whale detections
title_sort comparing neural networks against click train detectors to reveal temporal trends in passive acoustic sperm whale detections
topic QH301 Biology
DAS
QH301
topic_facet QH301 Biology
DAS
QH301
url https://hdl.handle.net/10023/31210
https://doi.org/10.1121/10.0034602