Collecting baleen whale blow samples by drone : a minimally intrusive tool for conservation genetics

_Carol Newell, Donner Canadian Foundation, Elizabeth Haan, Fisheries and Oceans Canada_ Habitat Stewardship Program for Species at Risk, Save Our Seas Foundation, Willow Grove Foundation_ In coastal British Columbia, Canada, marine megafauna such as humpback whales (Megaptera novaeangliae) and fin w...

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Published in:Molecular Ecology Resources
Main Authors: O'Mahony, Éadin, Sremba, Angela, Keen, Eric, Robinson, Nicole, Dundas, Archie, Steele, Debbie, Wray, Janie, Baker, C. Scott, Gaggiotti, Oscar Eduardo
Other Authors: University of St Andrews.School of Biology, University of St Andrews.Scottish Oceans Institute
Format: Article in Journal/Newspaper
Language:English
Published: 2024
Subjects:
Online Access:https://hdl.handle.net/10023/29615
https://doi.org/10.1111/1755-0998.13957
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author O'Mahony, Éadin
Sremba, Angela
Keen, Eric
Robinson, Nicole
Dundas, Archie
Steele, Debbie
Wray, Janie
Baker, C. Scott
Gaggiotti, Oscar Eduardo
author2 University of St Andrews.School of Biology
University of St Andrews.Scottish Oceans Institute
author_facet O'Mahony, Éadin
Sremba, Angela
Keen, Eric
Robinson, Nicole
Dundas, Archie
Steele, Debbie
Wray, Janie
Baker, C. Scott
Gaggiotti, Oscar Eduardo
author_sort O'Mahony, Éadin
collection University of St Andrews: Digital Research Repository
container_title Molecular Ecology Resources
description _Carol Newell, Donner Canadian Foundation, Elizabeth Haan, Fisheries and Oceans Canada_ Habitat Stewardship Program for Species at Risk, Save Our Seas Foundation, Willow Grove Foundation_ In coastal British Columbia, Canada, marine megafauna such as humpback whales (Megaptera novaeangliae) and fin whales (Balaenoptera physalus velifera) have been subject to a history of exploitation and near extirpation. While their populations have been in recovery, significant threats are posed to these vulnerable species by proposed natural resource ventures in this region, in addition to the compounding effects of anthropogenic climate change. Genetic tools play a vital role in informing conservation efforts, but the associated collection of tissue biopsy samples can be challenging for the investigators and disruptive to the ongoing behaviour of the targeted whales. Here, we evaluate a minimally intrusive approach based on collecting exhaled breath condensate, or respiratory ‘blow’ samples, from baleen whales using an unoccupied aerial system (UAS), within Gitga'at First Nation territory for conservation genetics. Minimal behavioural responses to the sampling technique were observed, with no response detected 87% of the time (of 112 UAS deployments). DNA from whale blow (n = 88 samples) was extracted, and DNA profiles consisting of 10 nuclear microsatellite loci, sex identification and mitochondrial (mt) DNA haplotypes were constructed. An average of 7.5 microsatellite loci per individual were successfully genotyped. The success rates for mtDNA and sex assignment were 80% and 89% respectively. Thus, this minimally intrusive sampling method can be used to describe genetic diversity and generate genetic profiles for individual identification. The results of this research demonstrate the potential of UAS-collected whale blow for conservation genetics from a remote location. Peer reviewed
format Article in Journal/Newspaper
genre Balaenoptera physalus
baleen whale
baleen whales
Megaptera novaeangliae
genre_facet Balaenoptera physalus
baleen whale
baleen whales
Megaptera novaeangliae
geographic Canada
British Columbia
Newell
geographic_facet Canada
British Columbia
Newell
id ftstandrewserep:oai:research-repository.st-andrews.ac.uk:10023/29615
institution Open Polar
language English
long_lat ENVELOPE(-125.003,-125.003,54.000,54.000)
ENVELOPE(-59.533,-59.533,-62.333,-62.333)
op_collection_id ftstandrewserep
op_doi https://doi.org/10.1111/1755-0998.13957
op_relation Molecular Ecology Resources
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85190358884
https://hdl.handle.net/10023/29615
op_rights Copyright © 2024 The Authors. Molecular Ecology Resources published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
publishDate 2024
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spelling ftstandrewserep:oai:research-repository.st-andrews.ac.uk:10023/29615 2025-04-13T14:16:16+00:00 Collecting baleen whale blow samples by drone : a minimally intrusive tool for conservation genetics O'Mahony, Éadin Sremba, Angela Keen, Eric Robinson, Nicole Dundas, Archie Steele, Debbie Wray, Janie Baker, C. Scott Gaggiotti, Oscar Eduardo University of St Andrews.School of Biology University of St Andrews.Scottish Oceans Institute 2024-04-05T10:30:05Z 2933610 application/pdf https://hdl.handle.net/10023/29615 https://doi.org/10.1111/1755-0998.13957 eng eng Molecular Ecology Resources 300538234 85190358884 https://hdl.handle.net/10023/29615 Copyright © 2024 The Authors. Molecular Ecology Resources published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. Conservation genetics Drones Unoccupied aerial systems Baleen whales Respiratory blow Humpback whales (Megaptera novaeangliae) Fin whales (Balaenoptera physalus) DAS Journal article 2024 ftstandrewserep https://doi.org/10.1111/1755-0998.13957 2025-03-19T08:01:32Z _Carol Newell, Donner Canadian Foundation, Elizabeth Haan, Fisheries and Oceans Canada_ Habitat Stewardship Program for Species at Risk, Save Our Seas Foundation, Willow Grove Foundation_ In coastal British Columbia, Canada, marine megafauna such as humpback whales (Megaptera novaeangliae) and fin whales (Balaenoptera physalus velifera) have been subject to a history of exploitation and near extirpation. While their populations have been in recovery, significant threats are posed to these vulnerable species by proposed natural resource ventures in this region, in addition to the compounding effects of anthropogenic climate change. Genetic tools play a vital role in informing conservation efforts, but the associated collection of tissue biopsy samples can be challenging for the investigators and disruptive to the ongoing behaviour of the targeted whales. Here, we evaluate a minimally intrusive approach based on collecting exhaled breath condensate, or respiratory ‘blow’ samples, from baleen whales using an unoccupied aerial system (UAS), within Gitga'at First Nation territory for conservation genetics. Minimal behavioural responses to the sampling technique were observed, with no response detected 87% of the time (of 112 UAS deployments). DNA from whale blow (n = 88 samples) was extracted, and DNA profiles consisting of 10 nuclear microsatellite loci, sex identification and mitochondrial (mt) DNA haplotypes were constructed. An average of 7.5 microsatellite loci per individual were successfully genotyped. The success rates for mtDNA and sex assignment were 80% and 89% respectively. Thus, this minimally intrusive sampling method can be used to describe genetic diversity and generate genetic profiles for individual identification. The results of this research demonstrate the potential of UAS-collected whale blow for conservation genetics from a remote location. Peer reviewed Article in Journal/Newspaper Balaenoptera physalus baleen whale baleen whales Megaptera novaeangliae University of St Andrews: Digital Research Repository Canada British Columbia ENVELOPE(-125.003,-125.003,54.000,54.000) Newell ENVELOPE(-59.533,-59.533,-62.333,-62.333) Molecular Ecology Resources
spellingShingle Conservation genetics
Drones
Unoccupied aerial systems
Baleen whales
Respiratory blow
Humpback whales (Megaptera novaeangliae)
Fin whales (Balaenoptera physalus)
DAS
O'Mahony, Éadin
Sremba, Angela
Keen, Eric
Robinson, Nicole
Dundas, Archie
Steele, Debbie
Wray, Janie
Baker, C. Scott
Gaggiotti, Oscar Eduardo
Collecting baleen whale blow samples by drone : a minimally intrusive tool for conservation genetics
title Collecting baleen whale blow samples by drone : a minimally intrusive tool for conservation genetics
title_full Collecting baleen whale blow samples by drone : a minimally intrusive tool for conservation genetics
title_fullStr Collecting baleen whale blow samples by drone : a minimally intrusive tool for conservation genetics
title_full_unstemmed Collecting baleen whale blow samples by drone : a minimally intrusive tool for conservation genetics
title_short Collecting baleen whale blow samples by drone : a minimally intrusive tool for conservation genetics
title_sort collecting baleen whale blow samples by drone : a minimally intrusive tool for conservation genetics
topic Conservation genetics
Drones
Unoccupied aerial systems
Baleen whales
Respiratory blow
Humpback whales (Megaptera novaeangliae)
Fin whales (Balaenoptera physalus)
DAS
topic_facet Conservation genetics
Drones
Unoccupied aerial systems
Baleen whales
Respiratory blow
Humpback whales (Megaptera novaeangliae)
Fin whales (Balaenoptera physalus)
DAS
url https://hdl.handle.net/10023/29615
https://doi.org/10.1111/1755-0998.13957