Demographic expansion and genetic load of the halophyte model plant Eutrema salsugineum

This work was supported by National Natural Science Foundation of China (31590821, 91331102, 91731301) and the Youth Science and Technology Innovation Team of Sichuan Province (2014TD003). The halophyte model plant Eutrema salsugineum (Brassicaceae) disjunctly occurs in temperate to subarctic Asia a...

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Published in:Molecular Ecology
Main Authors: Wang, Xiao-Juan, Hu, Quan-Jun, Guo, Xin-Yi, Wang, Kun, Ru, Da-Fu, German, Dmitry A., Weretilnyk, Elizabeth A., Abbott, Richard J., Lascoux, Martin, Liu, Jian-Quan
Other Authors: University of St Andrews.School of Biology
Format: Article in Journal/Newspaper
Language:English
Published: 2019
Subjects:
DAS
Online Access:https://hdl.handle.net/10023/17945
https://doi.org/10.1111/mec.14738
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spelling ftstandrewserep:oai:research-repository.st-andrews.ac.uk:10023/17945 2024-09-15T18:38:03+00:00 Demographic expansion and genetic load of the halophyte model plant Eutrema salsugineum Wang, Xiao-Juan Hu, Quan-Jun Guo, Xin-Yi Wang, Kun Ru, Da-Fu German, Dmitry A. Weretilnyk, Elizabeth A. Abbott, Richard J. Lascoux, Martin Liu, Jian-Quan University of St Andrews.School of Biology 2019-06-22 1568818 application/pdf https://hdl.handle.net/10023/17945 https://doi.org/10.1111/mec.14738 eng eng Molecular Ecology 253291241 fbbf8884-7109-4810-b50b-bb2b8fb64054 85049783894 000438352500004 Wang , X-J , Hu , Q-J , Guo , X-Y , Wang , K , Ru , D-F , German , D A , Weretilnyk , E A , Abbott , R J , Lascoux , M & Liu , J-Q 2018 , ' Demographic expansion and genetic load of the halophyte model plant Eutrema salsugineum ' , Molecular Ecology , vol. 27 , no. 14 , pp. 2943-2955 . https://doi.org/10.1111/mec.14738 0962-1083 crossref: 10.1111/mec.14738 https://hdl.handle.net/10023/17945 doi:10.1111/mec.14738 © 2018 John Wiley & Sons Ltd. This work has been made available online in accordance with the publisher’s policies. This is the author created, accepted version manuscript following peer review and may differ slightly from the final published version. The final published version of this work is available at https://doi.org/10.1111/mec.14738 Eutrema salsugineum Migration Hybrid lineage Long-distance dispersal Expansion Deleterious variant QH301 Biology DAS QH301 Journal article 2019 ftstandrewserep https://doi.org/10.1111/mec.14738 2024-08-28T00:12:18Z This work was supported by National Natural Science Foundation of China (31590821, 91331102, 91731301) and the Youth Science and Technology Innovation Team of Sichuan Province (2014TD003). The halophyte model plant Eutrema salsugineum (Brassicaceae) disjunctly occurs in temperate to subarctic Asia and North America. This vast, yet extremely discontinuous distribution constitutes an ideal system to examine long‐distance dispersal and the ensuing accumulation of deleterious mutations as expected in expanding populations of selfing plants. In this study, we re‐sequenced individuals from 23 populations across the range of E. salsugineum. Our population genomic data indicate that E. salsugineum migrated ‘out of the Altai region’ at least three times to colonize northern China, northeast Russia and western China. It then expanded its distribution into North America independently from northeast Russia and northern China, respectively. The species colonized northern China around 33.7 thousand years ago (kya) and underwent a considerable expansion in range size approximately 7‐8 kya. The western China lineage is likely a hybrid derivative of the northern China and Altai lineages, originating approximately 25‐30 kya. Deleterious alleles accumulated in a stepwise manner from (i) Altai to northern China and North America, and (ii) from Altai to northeast Russia and North America. In summary, E. salsugineum dispersed from Asia to North America and deleterious mutations accumulated in a stepwise manner during the expansion of the species’ distribution. Peer reviewed Article in Journal/Newspaper Subarctic University of St Andrews: Digital Research Repository Molecular Ecology 27 14 2943 2955
institution Open Polar
collection University of St Andrews: Digital Research Repository
op_collection_id ftstandrewserep
language English
topic Eutrema salsugineum
Migration
Hybrid lineage
Long-distance dispersal
Expansion
Deleterious variant
QH301 Biology
DAS
QH301
spellingShingle Eutrema salsugineum
Migration
Hybrid lineage
Long-distance dispersal
Expansion
Deleterious variant
QH301 Biology
DAS
QH301
Wang, Xiao-Juan
Hu, Quan-Jun
Guo, Xin-Yi
Wang, Kun
Ru, Da-Fu
German, Dmitry A.
Weretilnyk, Elizabeth A.
Abbott, Richard J.
Lascoux, Martin
Liu, Jian-Quan
Demographic expansion and genetic load of the halophyte model plant Eutrema salsugineum
topic_facet Eutrema salsugineum
Migration
Hybrid lineage
Long-distance dispersal
Expansion
Deleterious variant
QH301 Biology
DAS
QH301
description This work was supported by National Natural Science Foundation of China (31590821, 91331102, 91731301) and the Youth Science and Technology Innovation Team of Sichuan Province (2014TD003). The halophyte model plant Eutrema salsugineum (Brassicaceae) disjunctly occurs in temperate to subarctic Asia and North America. This vast, yet extremely discontinuous distribution constitutes an ideal system to examine long‐distance dispersal and the ensuing accumulation of deleterious mutations as expected in expanding populations of selfing plants. In this study, we re‐sequenced individuals from 23 populations across the range of E. salsugineum. Our population genomic data indicate that E. salsugineum migrated ‘out of the Altai region’ at least three times to colonize northern China, northeast Russia and western China. It then expanded its distribution into North America independently from northeast Russia and northern China, respectively. The species colonized northern China around 33.7 thousand years ago (kya) and underwent a considerable expansion in range size approximately 7‐8 kya. The western China lineage is likely a hybrid derivative of the northern China and Altai lineages, originating approximately 25‐30 kya. Deleterious alleles accumulated in a stepwise manner from (i) Altai to northern China and North America, and (ii) from Altai to northeast Russia and North America. In summary, E. salsugineum dispersed from Asia to North America and deleterious mutations accumulated in a stepwise manner during the expansion of the species’ distribution. Peer reviewed
author2 University of St Andrews.School of Biology
format Article in Journal/Newspaper
author Wang, Xiao-Juan
Hu, Quan-Jun
Guo, Xin-Yi
Wang, Kun
Ru, Da-Fu
German, Dmitry A.
Weretilnyk, Elizabeth A.
Abbott, Richard J.
Lascoux, Martin
Liu, Jian-Quan
author_facet Wang, Xiao-Juan
Hu, Quan-Jun
Guo, Xin-Yi
Wang, Kun
Ru, Da-Fu
German, Dmitry A.
Weretilnyk, Elizabeth A.
Abbott, Richard J.
Lascoux, Martin
Liu, Jian-Quan
author_sort Wang, Xiao-Juan
title Demographic expansion and genetic load of the halophyte model plant Eutrema salsugineum
title_short Demographic expansion and genetic load of the halophyte model plant Eutrema salsugineum
title_full Demographic expansion and genetic load of the halophyte model plant Eutrema salsugineum
title_fullStr Demographic expansion and genetic load of the halophyte model plant Eutrema salsugineum
title_full_unstemmed Demographic expansion and genetic load of the halophyte model plant Eutrema salsugineum
title_sort demographic expansion and genetic load of the halophyte model plant eutrema salsugineum
publishDate 2019
url https://hdl.handle.net/10023/17945
https://doi.org/10.1111/mec.14738
genre Subarctic
genre_facet Subarctic
op_relation Molecular Ecology
253291241
fbbf8884-7109-4810-b50b-bb2b8fb64054
85049783894
000438352500004
Wang , X-J , Hu , Q-J , Guo , X-Y , Wang , K , Ru , D-F , German , D A , Weretilnyk , E A , Abbott , R J , Lascoux , M & Liu , J-Q 2018 , ' Demographic expansion and genetic load of the halophyte model plant Eutrema salsugineum ' , Molecular Ecology , vol. 27 , no. 14 , pp. 2943-2955 . https://doi.org/10.1111/mec.14738
0962-1083
crossref: 10.1111/mec.14738
https://hdl.handle.net/10023/17945
doi:10.1111/mec.14738
op_rights © 2018 John Wiley & Sons Ltd. This work has been made available online in accordance with the publisher’s policies. This is the author created, accepted version manuscript following peer review and may differ slightly from the final published version. The final published version of this work is available at https://doi.org/10.1111/mec.14738
op_doi https://doi.org/10.1111/mec.14738
container_title Molecular Ecology
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