AttU-NET: attention U-net for brain tumor segmentation

Tumor delineation is critical for the precise diagnosis and treatment of glioma patients. Since manual segmentation is time-consuming and tedious, automatic segmentation is desired. With the advent of convolution neural network (CNN), tremendous CNN models have been proposed for medical image segmen...

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Main Authors: Wang, Sihan, Li, Lei, Zhuang, Xiahai
Other Authors: Crimi, Alessandro, Bakas, Spyridon
Format: Conference Object
Language:English
Published: Springer Cham 2022
Subjects:
Online Access:https://eprints.soton.ac.uk/488815/
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spelling ftsouthampton:oai:eprints.soton.ac.uk:488815 2024-05-12T08:01:24+00:00 AttU-NET: attention U-net for brain tumor segmentation Wang, Sihan Li, Lei Zhuang, Xiahai Crimi, Alessandro Bakas, Spyridon 2022-07-15 https://eprints.soton.ac.uk/488815/ English eng Springer Cham Wang, Sihan, Li, Lei and Zhuang, Xiahai (2022) AttU-NET: attention U-net for brain tumor segmentation. Crimi, Alessandro and Bakas, Spyridon (eds.) In Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries: 7th International Workshop, BrainLes 2021, Held in Conjunction with MICCAI 2021, Virtual Event, September 27, 2021, Revised Selected Papers, Part II. vol. 12963, Springer Cham. pp. 302-311 . (doi:10.1007/978-3-031-09002-8_27 <http://dx.doi.org/10.1007/978-3-031-09002-8_27>). Conference or Workshop Item PeerReviewed 2022 ftsouthampton https://doi.org/10.1007/978-3-031-09002-8_27 2024-04-17T14:08:58Z Tumor delineation is critical for the precise diagnosis and treatment of glioma patients. Since manual segmentation is time-consuming and tedious, automatic segmentation is desired. With the advent of convolution neural network (CNN), tremendous CNN models have been proposed for medical image segmentation. However, the small size of kernel limits the shape of the receptive view, omitting the global information. To utilize the intrinsic features of brain anatomical structure, we propose a modified U-Net with an attention block (AttU-Net) to tract the complementary information from the whole image. The proposed attention block can be easily added to any segmentation backbones, which improved the Dice score by 5%. We evaluated our approach on the dataset of BraTS 2021 challenge and achieved promising performance on this dataset. The Dice scores of enhancing tumor, tumor core, and whole tumor segmentation are 0.793, 0.819, and 0.879, respectively. Conference Object Attu University of Southampton: e-Prints Soton 302 311
institution Open Polar
collection University of Southampton: e-Prints Soton
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language English
description Tumor delineation is critical for the precise diagnosis and treatment of glioma patients. Since manual segmentation is time-consuming and tedious, automatic segmentation is desired. With the advent of convolution neural network (CNN), tremendous CNN models have been proposed for medical image segmentation. However, the small size of kernel limits the shape of the receptive view, omitting the global information. To utilize the intrinsic features of brain anatomical structure, we propose a modified U-Net with an attention block (AttU-Net) to tract the complementary information from the whole image. The proposed attention block can be easily added to any segmentation backbones, which improved the Dice score by 5%. We evaluated our approach on the dataset of BraTS 2021 challenge and achieved promising performance on this dataset. The Dice scores of enhancing tumor, tumor core, and whole tumor segmentation are 0.793, 0.819, and 0.879, respectively.
author2 Crimi, Alessandro
Bakas, Spyridon
format Conference Object
author Wang, Sihan
Li, Lei
Zhuang, Xiahai
spellingShingle Wang, Sihan
Li, Lei
Zhuang, Xiahai
AttU-NET: attention U-net for brain tumor segmentation
author_facet Wang, Sihan
Li, Lei
Zhuang, Xiahai
author_sort Wang, Sihan
title AttU-NET: attention U-net for brain tumor segmentation
title_short AttU-NET: attention U-net for brain tumor segmentation
title_full AttU-NET: attention U-net for brain tumor segmentation
title_fullStr AttU-NET: attention U-net for brain tumor segmentation
title_full_unstemmed AttU-NET: attention U-net for brain tumor segmentation
title_sort attu-net: attention u-net for brain tumor segmentation
publisher Springer Cham
publishDate 2022
url https://eprints.soton.ac.uk/488815/
genre Attu
genre_facet Attu
op_relation Wang, Sihan, Li, Lei and Zhuang, Xiahai (2022) AttU-NET: attention U-net for brain tumor segmentation. Crimi, Alessandro and Bakas, Spyridon (eds.) In Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries: 7th International Workshop, BrainLes 2021, Held in Conjunction with MICCAI 2021, Virtual Event, September 27, 2021, Revised Selected Papers, Part II. vol. 12963, Springer Cham. pp. 302-311 . (doi:10.1007/978-3-031-09002-8_27 <http://dx.doi.org/10.1007/978-3-031-09002-8_27>).
op_doi https://doi.org/10.1007/978-3-031-09002-8_27
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