Transcriptomic stability or lability explains sensitivity to climate stressors in coralline algae

Background: Crustose coralline algae (CCA) are calcifying red macroalgae that play important ecological roles including stabilisation of reef frameworks and provision of settlement cues for a range of marine invertebrates. Previous research into the responses of CCA to ocean warming (OW) and ocean a...

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Published in:BMC Genomics
Main Authors: Page, Tessa M., McDougall, Carmel, Bar, Ido, Diaz-Pulido, Guillermo
Format: Article in Journal/Newspaper
Language:English
Published: 2022
Subjects:
Online Access:https://eprints.soton.ac.uk/473049/
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spelling ftsouthampton:oai:eprints.soton.ac.uk:473049 2023-07-30T04:06:05+02:00 Transcriptomic stability or lability explains sensitivity to climate stressors in coralline algae Page, Tessa M. McDougall, Carmel Bar, Ido Diaz-Pulido, Guillermo 2022-10-27 https://eprints.soton.ac.uk/473049/ English eng Page, Tessa M., McDougall, Carmel, Bar, Ido and Diaz-Pulido, Guillermo (2022) Transcriptomic stability or lability explains sensitivity to climate stressors in coralline algae. BMC Genomics, 23 (1), [729]. (doi:10.1186/s12864-022-08931-9 <http://dx.doi.org/10.1186/s12864-022-08931-9>). Article PeerReviewed 2022 ftsouthampton https://doi.org/10.1186/s12864-022-08931-9 2023-07-09T22:57:17Z Background: Crustose coralline algae (CCA) are calcifying red macroalgae that play important ecological roles including stabilisation of reef frameworks and provision of settlement cues for a range of marine invertebrates. Previous research into the responses of CCA to ocean warming (OW) and ocean acidification (OA) have found magnitude of effect to be species-specific. Response to OW and OA could be linked to divergent underlying molecular processes across species. Results: Here we show Sporolithon durum, a species that exhibits low sensitivity to climate stressors, had little change in metabolic performance and did not significantly alter the expression of any genes when exposed to temperature and pH perturbations. In contrast, Porolithon onkodes, a major coral reef builder, reduced photosynthetic rates and had a labile transcriptomic response with over 400 significantly differentially expressed genes, with differential regulation of genes relating to physiological processes such as carbon acquisition and metabolism. The differential gene expression detected in P. onkodes implicates possible key metabolic pathways, including the pentose phosphate pathway, in the stress response of this species. Conclusions: We suggest S. durum is more resistant to OW and OA than P. onkodes, which demonstrated a high sensitivity to climate stressors and may have limited ability for acclimatisation. Understanding changes in gene expression in relation to physiological processes of CCA could help us understand and predict how different species will respond to, and persist in, future ocean conditions predicted for 2100. Article in Journal/Newspaper Ocean acidification University of Southampton: e-Prints Soton BMC Genomics 23 1
institution Open Polar
collection University of Southampton: e-Prints Soton
op_collection_id ftsouthampton
language English
description Background: Crustose coralline algae (CCA) are calcifying red macroalgae that play important ecological roles including stabilisation of reef frameworks and provision of settlement cues for a range of marine invertebrates. Previous research into the responses of CCA to ocean warming (OW) and ocean acidification (OA) have found magnitude of effect to be species-specific. Response to OW and OA could be linked to divergent underlying molecular processes across species. Results: Here we show Sporolithon durum, a species that exhibits low sensitivity to climate stressors, had little change in metabolic performance and did not significantly alter the expression of any genes when exposed to temperature and pH perturbations. In contrast, Porolithon onkodes, a major coral reef builder, reduced photosynthetic rates and had a labile transcriptomic response with over 400 significantly differentially expressed genes, with differential regulation of genes relating to physiological processes such as carbon acquisition and metabolism. The differential gene expression detected in P. onkodes implicates possible key metabolic pathways, including the pentose phosphate pathway, in the stress response of this species. Conclusions: We suggest S. durum is more resistant to OW and OA than P. onkodes, which demonstrated a high sensitivity to climate stressors and may have limited ability for acclimatisation. Understanding changes in gene expression in relation to physiological processes of CCA could help us understand and predict how different species will respond to, and persist in, future ocean conditions predicted for 2100.
format Article in Journal/Newspaper
author Page, Tessa M.
McDougall, Carmel
Bar, Ido
Diaz-Pulido, Guillermo
spellingShingle Page, Tessa M.
McDougall, Carmel
Bar, Ido
Diaz-Pulido, Guillermo
Transcriptomic stability or lability explains sensitivity to climate stressors in coralline algae
author_facet Page, Tessa M.
McDougall, Carmel
Bar, Ido
Diaz-Pulido, Guillermo
author_sort Page, Tessa M.
title Transcriptomic stability or lability explains sensitivity to climate stressors in coralline algae
title_short Transcriptomic stability or lability explains sensitivity to climate stressors in coralline algae
title_full Transcriptomic stability or lability explains sensitivity to climate stressors in coralline algae
title_fullStr Transcriptomic stability or lability explains sensitivity to climate stressors in coralline algae
title_full_unstemmed Transcriptomic stability or lability explains sensitivity to climate stressors in coralline algae
title_sort transcriptomic stability or lability explains sensitivity to climate stressors in coralline algae
publishDate 2022
url https://eprints.soton.ac.uk/473049/
genre Ocean acidification
genre_facet Ocean acidification
op_relation Page, Tessa M., McDougall, Carmel, Bar, Ido and Diaz-Pulido, Guillermo (2022) Transcriptomic stability or lability explains sensitivity to climate stressors in coralline algae. BMC Genomics, 23 (1), [729]. (doi:10.1186/s12864-022-08931-9 <http://dx.doi.org/10.1186/s12864-022-08931-9>).
op_doi https://doi.org/10.1186/s12864-022-08931-9
container_title BMC Genomics
container_volume 23
container_issue 1
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